Ggra6836.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra6836.t1
Unique Name	Ggra6836.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	134

Homology

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BLAST of Ggra6836.t1 vs. uniprot
Match: A0A2V3IPU2 (Cytochrome B5 isoform D n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPU2_9FLOR)

HSP 1 Score: 239 bits (609), Expect = 2.070e-79
Identity = 120/133 (90.23%), Postives = 125/133 (93.98%), Query Frame = 0

Query:    1 MPGSKAYPMVEVARHTSSSSCWMVIDSKVYDVTSFLLEHPGGDDILLDSSGRDSTREFEDVGHSSDARAQLAELHIGDLRDPTPEEIELAEQEKRERGESDEAQKGSVVAALAKWLLPLVLVGVAYILRQYAK 133
            MPGSKAYPMVEVARHTSSSSCWMVIDS VYDVTSFLLEHPGGDDILLDSSGRD+TREFEDVGHSSDARAQLAEL IG+LRDPTPEE+ LAEQE RERGES EAQKG VV+ALAKWLLPL LVGVAYILR+Y K
Sbjct:    1 MPGSKAYPMVEVARHTSSSSCWMVIDSNVYDVTSFLLEHPGGDDILLDSSGRDATREFEDVGHSSDARAQLAELQIGELRDPTPEEVALAEQEARERGESAEAQKGGVVSALAKWLLPLFLVGVAYILRKYVK 133

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BLAST of Ggra6836.t1 vs. uniprot
Match: R7QCY4 (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCY4_CHOCR)

HSP 1 Score: 179 bits (455), Expect = 6.510e-56
Identity = 87/135 (64.44%), Postives = 108/135 (80.00%), Query Frame = 0

Query:    1 MPGSKAYPMVEVARHTSSSSCWMVIDSKVYDVTSFLLEHPGGDDILLDSSGRDSTREFEDVGHSSDARAQLAELHIGDLRDPTPEEIELAEQEKRERGESDEAQKG--SVVAALAKWLLPLVLVGVAYILRQYAK 133
            MP  K YPM+EVARH+++ SCW+VID KVYD T FLLEHPGGDDI+++SSGRD+TREFEDVGHS +ARAQL +L IG LRDPTPEE E AE E R+ GE   A     +++  +A W+LP+VLVG+AY+LR+YAK
Sbjct:    1 MPDMKEYPMIEVARHSTADSCWLVIDGKVYDTTDFLLEHPGGDDIVVESSGRDATREFEDVGHSGEARAQLEDLLIGTLRDPTPEETERAEDEARKSGEKPAAADAGSAMLKTIAGWVLPIVLVGLAYLLRKYAK 135

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BLAST of Ggra6836.t1 vs. uniprot
Match: A0A5J4Z7Y1 (Cytochrome B5 isoform D n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7Y1_PORPP)

HSP 1 Score: 137 bits (344), Expect = 6.940e-39
Identity = 71/134 (52.99%), Postives = 90/134 (67.16%), Query Frame = 0

Query:    1 MPGSKAYPMVEVARHTSSSSCWMVIDSKVYDVTSFLLEHPGGDDILLDSSGRDSTREFEDVGHSSDARAQLAELHIGDLRDPTPEEIE-LAEQEKRERGESDEAQKGSVVAALAKWLLPLVLVGVAYILRQYAK 133
            M   K + M+EV  H S    WMVID KVYDVTSFLL+HPGGDD+LL + GRD+ REFEDVGHS DAR +L EL +G LRDPTPEE E +AE EK  +     A   S V    K+L P++++ +A ++R+Y  
Sbjct:   13 MADMKEFSMLEVLEHASRQDFWMVIDGKVYDVTSFLLDHPGGDDLLLQTLGRDAHREFEDVGHSGDARQKLEELFVGKLRDPTPEESEKMAELEKAGKKVGPVASANSPVQTALKFLFPVLILVIALVVRKYVS 146

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BLAST of Ggra6836.t1 vs. uniprot
Match: A0A7S0G445 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G445_9RHOD)

HSP 1 Score: 130 bits (327), Expect = 2.340e-36
Identity = 70/137 (51.09%), Postives = 93/137 (67.88%), Query Frame = 0

Query:    1 MPGSKAYPMVEVARHTSSSSCWMVIDSKVYDVTSFLLEHPGGDDILLDSSGRDSTREFEDVGHSSDARAQLAELHIGDLRDPTPEEIELAEQEKR-ERGES-----DEAQKGSVVAALAKWLLPLVLVGVAYILRQY 131
            M   K Y ++EVA+H     CWMVI  KVYDVTSFLL+HPGG+DIL+++SGRD+TREFEDVGHS+DAR  L +L +G LR+PT EE   AE EK+   G S      E    S +    K+L+P++++ V  +LRQ+
Sbjct:    1 MGEEKQYSLLEVAKHDKRKDCWMVIHGKVYDVTSFLLDHPGGEDILVETSGRDATREFEDVGHSNDARGALKDLLLGTLREPTEEE--KAEHEKKVAEGRSKSIISSENDDESFIQKATKFLVPVLIIAVGLLLRQW 135

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BLAST of Ggra6836.t1 vs. uniprot
Match: A0A7S1TD50 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD50_9RHOD)

HSP 1 Score: 122 bits (305), Expect = 4.790e-33
Identity = 62/135 (45.93%), Postives = 89/135 (65.93%), Query Frame = 0

Query:    9 MVEVARHTSSSSCWMVIDSKVYDVTSFLLEHPGGDDILLDSSGRDSTREFEDVGHSSDARAQLAELHIGDLRDPTPEEIELAEQEKRERGESD----------EAQKGSVVAALAKWLLPLVLVGVAYILRQYAK 133
            M+E+ +HT   SCWMVI   VYDVT FLL+HPGGDD+LLD +G+D+TR FEDVGHS+DAR ++ +L++G +       + L E+EK +  ES           E  K ++   LAK+L P+V++GVA ++R+Y  
Sbjct:   13 MLELQQHTKKQSCWMVIHGDVYDVTPFLLDHPGGDDVLLDWAGKDATRGFEDVGHSNDAREEMKKLYVGKI-------LPLTEEEKSKLAESGTKAMSNVTTLEGNKQTLWMTLAKYLFPVVILGVALLIRKYTS 140

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BLAST of Ggra6836.t1 vs. uniprot
Match: A5ATD8 (Cytochrome b5 heme-binding domain-containing protein n=3 Tax=Pentapetalae TaxID=1437201 RepID=A5ATD8_VITVI)

HSP 1 Score: 117 bits (293), Expect = 2.570e-31
Identity = 57/134 (42.54%), Postives = 86/134 (64.18%), Query Frame = 0

Query:    1 MPGSKAYPMVEVARHTSSSSCWMVIDSKVYDVTSFLLEHPGGDDILLDSSGRDSTREFEDVGHSSDARAQLAELHIGDLRDPT-PEEIELAEQEKRERGESDEAQKGSVVAALAKWLLPLVLVGVAYILRQYAK 133
            M   K Y + EV+ H +   CW++ID KVYDVT FL +HPGGDD+LL ++G+D+T +FEDVGHSS ARA + E H+GD+   T P ++     ++    +   ++    V  L ++L+PL+++GVA  +R Y K
Sbjct:    1 MGEGKVYTLAEVSEHNTPKDCWLIIDGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSSSARAMMDEFHVGDIDTATIPSKVNYTPPKQPHYNQDKTSE---FVIKLLQFLVPLIILGVAVGIRFYTK 131

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BLAST of Ggra6836.t1 vs. uniprot
Match: cytochrome b5 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125DF52A (cytochrome b5 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125DF52A)

HSP 1 Score: 117 bits (292), Expect = 3.870e-31
Identity = 56/131 (42.75%), Postives = 85/131 (64.89%), Query Frame = 0

Query:    3 GSKAYPMVEVARHTSSSSCWMVIDSKVYDVTSFLLEHPGGDDILLDSSGRDSTREFEDVGHSSDARAQLAELHIGDLRDPTPEEIELAEQEKRERGESDEAQKGSVVAALAKWLLPLVLVGVAYILRQYAK 133
            GSK Y + +V++H ++  CW++ID KVYDVT FL +HPGGD++LL S+G+D+T +FEDVGHSS ARA + E ++GD+   T          K+     D+      +  L ++L+PL+++GVA  +R Y K
Sbjct:    4 GSKVYTLAQVSQHNNAKDCWLIIDGKVYDVTKFLEDHPGGDEVLLSSTGKDATDDFEDVGHSSSARAMMDEYYVGDIDSSTIPSKTKYTPPKQPHYNQDKTS--DFIVKLLQFLVPLIILGVAVGVRFYTK 132

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BLAST of Ggra6836.t1 vs. uniprot
Match: A0A1X6NSS8 (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSS8_PORUM)

HSP 1 Score: 114 bits (286), Expect = 1.560e-30
Identity = 55/97 (56.70%), Postives = 72/97 (74.23%), Query Frame = 0

Query:    2 PGSKAYPMVEVARHTSSSSCWMVIDSKVYDVTSFLLEHPGGDDILLDSSGRDSTREFEDVGHSSDARAQLAELHIGDLRDPTPEEIELAEQEKRERG 98
            P  +  P  E+A HTS SS WM+ID KV+D+T+FL +HPGGD+ILLD++ RD+T+EFEDVGHS +ARAQLAE+ IG  R PT EE  +A ++    G
Sbjct:    5 PPMREIPTTELADHTSRSSAWMLIDGKVHDITAFLDDHPGGDEILLDATARDATQEFEDVGHSGEARAQLAEMVIGVARPPTAEEAAVAAEKAAAAG 101

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BLAST of Ggra6836.t1 vs. uniprot
Match: A0A371GB53 (Cytochrome b5 heme-binding domain-containing protein (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371GB53_MUCPR)

HSP 1 Score: 114 bits (285), Expect = 4.580e-30
Identity = 53/127 (41.73%), Postives = 85/127 (66.93%), Query Frame = 0

Query:    5 KAYPMVEVARHTSSSSCWMVIDSKVYDVTSFLLEHPGGDDILLDSSGRDSTREFEDVGHSSDARAQLAELHIGDLRDPTPEEIELAEQEKRERGESDEAQKGSVVAALAKWLLPLVLVGVAYILRQY 131
            K Y + +V+ H +S  CW++ID KVY+VT FL +HPGGDD+LL ++G+D+T +FEDVGHS  ARA L +L++GD+ DPT    ++     ++   + +      +  + ++LLPL+++GVA  +R Y
Sbjct:    6 KVYTLAQVSEHNNSKDCWLIIDGKVYNVTKFLDDHPGGDDVLLSATGKDATDDFEDVGHSDSARAMLNDLYVGDI-DPTTIPTKVKHIPPKQPQHNPDKTSSEFMIKMLQFLLPLIILGVAVGIRFY 131

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BLAST of Ggra6836.t1 vs. uniprot
Match: A0A0D2PRP3 (Cytochrome b5 heme-binding domain-containing protein n=29 Tax=Malvoideae TaxID=214907 RepID=A0A0D2PRP3_GOSRA)

HSP 1 Score: 114 bits (284), Expect = 6.670e-30
Identity = 55/129 (42.64%), Postives = 84/129 (65.12%), Query Frame = 0

Query:    5 KAYPMVEVARHTSSSSCWMVIDSKVYDVTSFLLEHPGGDDILLDSSGRDSTREFEDVGHSSDARAQLAELHIGDLRDPTPEEIELAEQEKRERGESDEAQKGSVVAALAKWLLPLVLVGVAYILRQYAK 133
            K Y + EV++H  +  CW+VI+ KV+DVT FL +HPGGDD+LL S+G+D+T +FEDVGHSS ARA + E ++GD+              K+   E D+  +   V  L ++L+PL+++G+A+ +R Y K
Sbjct:    6 KVYTLAEVSQHNHAKDCWLVIEGKVFDVTKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSSSARAMMDEFYVGDIDTSAIPSKRKYTPPKQPHYEQDKTSE--FVIKLLQFLVPLLILGLAFGVRSYTK 132

The following BLAST results are available for this feature:

BLAST of Ggra6836.t1 vs. uniprot

BLAST of Ggra6836.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3IPU2	2.070e-79	90.23	Cytochrome B5 isoform D n=1 Tax=Gracilariopsis cho...	[more]
R7QCY4	6.510e-56	64.44	Cytochrome b5 heme-binding domain-containing prote...	[more]
A0A5J4Z7Y1	6.940e-39	52.99	Cytochrome B5 isoform D n=1 Tax=Porphyridium purpu...	[more]
A0A7S0G445	2.340e-36	51.09	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]
A0A7S1TD50	4.790e-33	45.93	Hypothetical protein n=1 Tax=Compsopogon caeruleus...	[more]
A5ATD8	2.570e-31	42.54	Cytochrome b5 heme-binding domain-containing prote...	[more]
cytochrome b5 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125DF52A	3.870e-31	42.75	cytochrome b5 n=1 Tax=Ipomoea triloba TaxID=35885 ...	[more]
A0A1X6NSS8	1.560e-30	56.70	Cytochrome b5 heme-binding domain-containing prote...	[more]
A0A371GB53	4.580e-30	41.73	Cytochrome b5 heme-binding domain-containing prote...	[more]
A0A0D2PRP3	6.670e-30	42.64	Cytochrome b5 heme-binding domain-containing prote...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001199	Cytochrome b5-like heme/steroid binding domain	PRINTS	PR00363	CYTOCHROMEB5	coord: 67..79 score: 41.03 coord: 29..39 score: 62.12 coord: 54..61 score: 44.32 coord: 39..53 score: 50.51
IPR001199	Cytochrome b5-like heme/steroid binding domain	SMART	SM01117	Cyt_b5_2	coord: 7..80 e-value: 3.3E-25 score: 99.8
IPR001199	Cytochrome b5-like heme/steroid binding domain	PFAM	PF00173	Cyt-b5	coord: 11..79 e-value: 4.9E-20 score: 71.5
IPR001199	Cytochrome b5-like heme/steroid binding domain	PROSITE	PS50255	CYTOCHROME_B5_2	coord: 4..80 score: 25.960201
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	GENE3D	3.10.120.10		coord: 3..93 e-value: 1.3E-29 score: 104.1
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	SUPERFAMILY	55856	Cytochrome b5-like heme/steroid binding domain	coord: 4..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..103
None	No IPR available	PANTHER	PTHR19359	CYTOCHROME B5	coord: 4..132
None	No IPR available	PANTHER	PTHR19359:SF107	CYTOCHROME B5 ISOFORM B	coord: 4..132
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..107
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 129..133
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 108..128
None	No IPR available	TMHMM	TMhelix		coord: 106..128
IPR018506	Cytochrome b5, heme-binding site	PROSITE	PS00191	CYTOCHROME_B5_1	coord: 35..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000056_pilon	contig	tig00000056_pilon:639358..639856 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra6836.t1	Ggra6836.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000056_pilon 639358..639856 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra6836.t1 ID=Ggra6836.t1|Name=Ggra6836.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=134bp
MPGSKAYPMVEVARHTSSSSCWMVIDSKVYDVTSFLLEHPGGDDILLDSS
GRDSTREFEDVGHSSDARAQLAELHIGDLRDPTPEEIELAEQEKRERGES
DEAQKGSVVAALAKWLLPLVLVGVAYILRQYAK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001199	Cyt_B5-like_heme/steroid-bd
IPR036400	Cyt_B5-like_heme/steroid_sf
IPR018506	Cyt_B5_heme-BS