Ggra6738.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6738.t1
Unique NameGgra6738.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length276
Homology
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BLAST of Ggra6738.t1 vs. uniprot
Match: A0A2V3IGT2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGT2_9FLOR)

HSP 1 Score: 292 bits (747), Expect = 3.280e-96
Identity = 146/216 (67.59%), Postives = 185/216 (85.65%), Query Frame = 0 
Query:   60 EEASYADYQAIFEEDGKPLWDTLDVSKALEPLTEEEKQRLRSKLPKQLANFLIRRAEAAVRLRNTKPGDSTFIGNFLKDLPPDRIAWDDPENEEFRDYVYETTTGPPSYRRQGSSLFGGGDGLPDMEDLPDVEGPVETSTGLRGPKKLMSMFVGNVNSVDEQAAKVGYTLLALFVLFIAGKIGFALITFFLSFTFSFLSIFALSAGIFVVFYLFRF 275
            ++ ++ +++ +F E    LWD L+VS+ALEPLTEEEKQ+LRS+LP +LANFLIRRA+AAVRLR+TK GD +F+G FL DLPPD   WD+P N E+RDYVYETTTGPPS+RRQGSS+FGGGDG PD++D+P+ EG V+ + G+  PK+++S+FVGNV+S+DEQAAKVGYTLLALF++ I  KI FALI+FF+SFTFSF SIFALSAGIFVVFYLF+F
Sbjct:   41 DDDAFYNFENLFSESESSLWDNLEVSRALEPLTEEEKQKLRSRLPTKLANFLIRRADAAVRLRDTKGGDDSFLGQFLSDLPPDVPDWDNPANAEYRDYVYETTTGPPSFRRQGSSIFGGGDGAPDLKDMPNSEGFVDVTNGVTFPKQVVSLFVGNVDSIDEQAAKVGYTLLALFLVLIVAKIIFALISFFVSFTFSFFSIFALSAGIFVVFYLFKF 256
The following BLAST results are available for this feature:
BLAST of Ggra6738.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IGT23.280e-9667.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..273
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 229..250
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..228
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 251..255
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 274..275
NoneNo IPR availableTMHMMTMhelixcoord: 251..273
NoneNo IPR availableTMHMMTMhelixcoord: 225..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:324716..325543 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6738.t1Ggra6738.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 324716..325543 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6738.t1 ID=Ggra6738.t1|Name=Ggra6738.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=276bp
MEVSNSKPERNQSEADSEEDSEQSIDVSGQEQRQPQAQKPLEDGDDEEEE
EEEIDVEVEEEASYADYQAIFEEDGKPLWDTLDVSKALEPLTEEEKQRLR
SKLPKQLANFLIRRAEAAVRLRNTKPGDSTFIGNFLKDLPPDRIAWDDPE
NEEFRDYVYETTTGPPSYRRQGSSLFGGGDGLPDMEDLPDVEGPVETSTG
LRGPKKLMSMFVGNVNSVDEQAAKVGYTLLALFVLFIAGKIGFALITFFL
SFTFSFLSIFALSAGIFVVFYLFRF*
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