Ggra6732.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6732.t1
Unique NameGgra6732.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length212
Homology
BLAST of Ggra6732.t1 vs. uniprot
Match: A0A2V3IGP0 (Tetratricopeptide repeat protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGP0_9FLOR)

HSP 1 Score: 251 bits (641), Expect = 7.450e-82
Identity = 139/210 (66.19%), Postives = 171/210 (81.43%), Query Frame = 0
Query:    2 SSARDAEEEYMRMRMASTKLSDEDQSESQAPETKANPELDDTITADAARVLKEEGNALYKSGDFAKAIEKYSLASKSAHASQEDRAVYFANRAAAHLKLQDFEQVVKDASKALELKPGYVKALSRRQEAREALKEWHGALQDAQELKASSSEIKRLQFLAQEKDKKDQAEALESLKGLGDSILSNFGMSLDDFAMDKDPETGSYSIRMKQ 211
            SS RDAEEEYMRMR   T  S E  S    P      +LD +I+ADAAR LKEEGNAL+K+  + +AIEKY+ A KSAHAS +DRAVY ANRAAAHLKLQ+F+QVV+D S+AL L P YVKALSRR++AREALK+W GA+QDA++L  S ++I+RLQ LA+EKDK+D+ EA++SLKGLG+SILSNFGMSLDDF++DKDP+TGSYSI MK+
Sbjct:    3 SSIRDAEEEYMRMR---TTPSSEQTSSHHHPSADTQ-QLDHSISADAARALKEEGNALFKTAHYQQAIEKYTQACKSAHASDQDRAVYLANRAAAHLKLQNFQQVVQDTSEALRLNPAYVKALSRRRQAREALKDWAGAVQDAKQLHESPADIRRLQMLAEEKDKRDREEAMQSLKGLGNSILSNFGMSLDDFSVDKDPQTGSYSINMKK 208          
BLAST of Ggra6732.t1 vs. uniprot
Match: Q7XZ74 (Translocase (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ74_GRIJA)

HSP 1 Score: 180 bits (456), Expect = 1.960e-54
Identity = 92/161 (57.14%), Postives = 124/161 (77.02%), Query Frame = 0
Query:   50 RVLKEEGNALYKSGDFAKAIEKYSLASKSAHASQEDRAVYFANRAAAHLKLQDFEQVVKDASKALELKPGYVKALSRRQEAREALKEWHGALQDAQELKASSSEIKRLQFLAQEKDKKDQAEALESLKGLGDSILSNFGMSLDDFAMDKDPETGSYSIRMK 210
            R  KEE NALY + ++ +AI  Y++A  S H    +RA+Y ANRAAA LKLQ F+ VV+DAS+AL+L PGYVKAL RR+EARE L +W GAL+DA++L    +E+ RL   AQ+K+  D+ EA+ +LKGLG+SILSNFGMSLDDFA++KDP +GS++++MK
Sbjct:    1 RARKEEANALYNAANYHRAIHLYTVAISSPHVPDHERAIYLANRAAAALKLQRFQDVVRDASQALDLNPGYVKALVRRKEARERLADWQGALEDAKQLALPPAELHRLSTAAQQKEATDRQEAMSALKGLGNSILSNFGMSLDDFAVEKDPNSGSFNVKMK 161          
BLAST of Ggra6732.t1 vs. uniprot
Match: A0A7S0WL98 (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WL98_9CHLO)

HSP 1 Score: 126 bits (316), Expect = 4.040e-32
Identity = 75/170 (44.12%), Postives = 104/170 (61.18%), Query Frame = 0
Query:   49 ARVLKEEGNALYKSGDFAKAIEKYSLASKSAHASQEDRAVYFANRAAAHLKLQDFEQVVKDASKALELKPGYVKALSRRQEAREALKEWHGALQDAQEL-------KASSSEIKRLQFLAQEKDKKDQAEALESLKGLGDSILSNFGMSLDDFAMDKDPETGSYSIRMKQ 211
            A  LK EGN LY SG+F KA +KY+ A + A   +  RAVY ANRAA  L+ + FE V++D +  LE+ P Y KAL RR +A E +     A +D +++         +S E  RL  L +E+ +K + E ++ LK LG+S+L NFG+SLD+F   KDP TGSYSI  +Q
Sbjct:   93 AEALKAEGNQLYSSGEFEKAEDKYTQAIEEAPGDEPKRAVYLANRAACRLQNERFELVIEDCTACLEINPIYTKALLRRAQAYEKIDNLENAHEDLKKVVELEPNNTVASKEYARLAPLVEERREKLKDEMIDKLKDLGNSVLGNFGLSLDNFKATKDPNTGSYSINFQQ 262          
BLAST of Ggra6732.t1 vs. uniprot
Match: A0A150FY13 (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FY13_GONPE)

HSP 1 Score: 121 bits (303), Expect = 5.030e-30
Identity = 78/171 (45.61%), Postives = 108/171 (63.16%), Query Frame = 0
Query:   49 ARVLKEEGNALYKSGDFAKAIEKYSLASKSAHASQ-EDRAVYFANRAAAHLKLQDFEQVVKDASKALELKPGYVKALSRRQEAREALKEWHGALQDAQELKAS-------SSEIKRLQFLAQEKDKKDQAEALESLKGLGDSILSNFGMSLDDFAMDKDPETGSYSIRMKQ 211
            A  LK EGN L+  G +A+A  KY+ A  +A AS  ++RA+YF+N AA ++K+ +F   V++ + ALEL+P Y KA  RR EA E L E   AL DA+ L A+       S+++  LQ    E+ +K +AE L  LK LG++IL  FGMS D+F  DKDP TGSYSIR ++
Sbjct:  109 AEGLKREGNELFGQGKWAEAAAKYNEALDAAPASAPKERAIYFSNLAACNIKMDEFAAAVQNCTAALELEPSYAKAHMRRCEAFERLDELDHALSDAKALLAAAPGNAWASAKVAALQPKVDERTEKLKAEMLGKLKELGNTILGKFGMSTDNFKFDKDPSTGSYSIRFER 279          
BLAST of Ggra6732.t1 vs. uniprot
Match: A0A7I8KSR8 (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KSR8_SPIIN)

HSP 1 Score: 120 bits (300), Expect = 6.700e-30
Identity = 74/177 (41.81%), Postives = 108/177 (61.02%), Query Frame = 0
Query:   49 ARVLKEEGNALYKSGDFAKAIEKYSLASKSAH---ASQEDRAVYFANRAAAHLKLQDFEQVVKDASKALELKPGYVKALSRRQEAREALKEWHGAL-----------QDAQELKASSSEIKRLQFLAQEKDKKDQAEALESLKGLGDSILSNFGMSLDDFAMDKDPETGSYSIRMKQ 211
            A  +KEEGN LY++G++ +A+EKY LA + A    +S E R++  ANRA  + KL  +E   K+ +KAL+L P Y+KAL RR EA E L+ +  A+            D Q  + +   I+RL+ LA EK +K + E +  LK LG+S+L  FGMS+D+F   KDP TGSYS+  ++
Sbjct:   71 ANDMKEEGNVLYRAGNYEEALEKYRLALQFASEITSSLEVRSICHANRAVCYSKLGKYEDTTKECTKALDLNPSYLKALLRRGEAHEKLQHFDEAIADMKKIIELHPSDVQSRREAEKAIRRLEPLAAEKREKLKDEMIGKLKDLGNSVLGRFGMSVDNFKAVKDPNTGSYSVSFQR 247          
BLAST of Ggra6732.t1 vs. uniprot
Match: A0A8B9AXH3 (LOW QUALITY PROTEIN: tetratricopeptide repeat protein 1-like n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9AXH3_PHODC)

HSP 1 Score: 116 bits (290), Expect = 3.730e-29
Identity = 75/172 (43.60%), Postives = 110/172 (63.95%), Query Frame = 0
Query:   49 ARVLKEEGNALYKSGDFAKAIEKYSLASKSAHA--SQEDRAVYFANRAAAHLKLQDFEQVVKDASKALELKPGYVKALSRRQEAREALKEWHGALQDAQE---LKASSSE----IKRLQFLAQEKDKKDQAEALESLKGLGDSILSNFGMSLDDFAMDKDPETGSYSIRMKQ 211
            A  +KEEGN L+K+G +  A+ +Y LA + A    S E  ++  ANRAA  LKL+ F   +K+ +KALEL P Y+KAL RR EA E L+ +  A+ D ++   L  S+ +    I+RL+ +A EK +K + E +  LK +G+SIL +FGMS+D+F   KDP TGSYSI+ ++
Sbjct:    9 ANDVKEEGNKLFKAGKYEDALLQYELALQIASEVPSSEVCSICHANRAACFLKLEKFNDTIKECTKALELNPLYIKALVRRAEANEKLEHYEEAIADWKKIVGLDTSNDQARRSIRRLEPIAAEKREKMKEEMIGKLKEMGNSILGHFGMSVDNFKAVKDPNTGSYSIQFQR 180          
BLAST of Ggra6732.t1 vs. uniprot
Match: A0A0M0J422 (Tetratricopeptide repeat protein 1-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J422_9EUKA)

HSP 1 Score: 116 bits (291), Expect = 5.990e-29
Identity = 76/170 (44.71%), Postives = 103/170 (60.59%), Query Frame = 0
Query:   49 ARVLKEEGNALYKSGDFAKAIEKYSLASKSAHASQEDRAVYFANRAAAHLKLQDFEQVVKDASKALELKPGYVKALSRRQEAREALKEWHGALQDAQELKASS-------SEIKRLQFLAQEKDKKDQAEALESLKGLGDSILSNFGMSLDDFAMDKDPETGSYSIRMKQ 211
            AR  KE GN  +K+ ++  AI+ Y+ A +     + +RAV+FANRAAA  K+ + E VV D + ALEL+P Y KAL RR  AREAL +   AL+DA+   A         + + RL+  + EK +K + E L  LK LG+S+L  FG+SLD+F   KDP TGSYSI   Q
Sbjct:   42 ARAHKERGNVHFKAQEWDAAIDCYTHAIEVMPPDEPERAVFFANRAAAFAKIDEHEGVVDDCTAALELQPQYTKALVRRALAREALDQPTEALEDAKTAAALDPSDKGLVAAVSRLEKASAEKLEKQKEEMLGKLKDLGNSVLGKFGLSLDNFKAVKDPNTGSYSISFGQ 211          
BLAST of Ggra6732.t1 vs. uniprot
Match: M2WQH7 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WQH7_GALSU)

HSP 1 Score: 114 bits (285), Expect = 1.870e-28
Identity = 68/163 (41.72%), Postives = 107/163 (65.64%), Query Frame = 0
Query:   53 KEEGNALYKSGDFAKAIEKYSLASKSAHASQEDRAVYFANRAAAHLKLQDFEQVVKDASKALELKPGYVKALSRRQEAREALKEWHGALQDAQELKA----SSSEIKRLQFLAQEKDKKDQAEALESLKGLGDSILSNFGMSLDDFAMDKDPETGSYSIRMKQ 211
            K  GN  +++  + +A E Y+LA  S   +  DRA  FANRAAA LKL+D+E  ++D S+AL L   Y KAL RR++    L  +  AL+DA+ LK     SS E++ ++ L + ++++ + EA+  LK +G+S+L  FG+S+D+F +DKDP TGSY+IR+++
Sbjct:   15 KNRGNEHFRNKQYEEACECYTLAL-SKPLNDADRAACFANRAAAKLKLEDYEGALEDCSEALNLDENYWKALYRREQCYLKLGRYEEALKDAKTLKEARQISSEEVQHIEQLKEREEERRKEEAITKLKEVGNSVLGYFGLSVDNFKLDKDPTTGSYNIRLEK 176          
BLAST of Ggra6732.t1 vs. uniprot
Match: A0A836C5E5 (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C5E5_9CHLO)

HSP 1 Score: 116 bits (291), Expect = 2.600e-28
Identity = 76/171 (44.44%), Postives = 105/171 (61.40%), Query Frame = 0
Query:   49 ARVLKEEGNALYKSGDFAKAIEKYSLASKSAHAS-QEDRAVYFANRAAAHLKLQDFEQVVKDASKALELKPGYVKALSRRQEAREALKEWHGALQDAQELKA-------SSSEIKRLQFLAQEKDKKDQAEALESLKGLGDSILSNFGMSLDDFAMDKDPETGSYSIRMKQ 211
            A  LK+EGN L+  G + +A  KY+ A   A AS    R+VYF+N  AA++K   F   V+  + ALEL+PGY KAL RR EA E L E   AL DA++L         + +++  LQ +  E+ +K +AE L  LK LG+SIL  FGMS+D+F  DKDP +GSYS+R ++
Sbjct:  103 AEALKKEGNELFGRGQWDEAAAKYNAALDEAPASCSAQRSVYFSNLGAANIKQGAFAAAVQHCTAALELEPGYQKALMRRCEAFERLDELDHALTDAKKLLELDPDSAWARAKVAALQPVVDERTEKLKAEMLGKLKDLGNSILGKFGMSVDNFKFDKDPNSGSYSVRFER 273          
BLAST of Ggra6732.t1 vs. uniprot
Match: I0YWQ6 (TPR protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YWQ6_COCSC)

HSP 1 Score: 114 bits (285), Expect = 3.630e-28
Identity = 73/171 (42.69%), Postives = 99/171 (57.89%), Query Frame = 0
Query:   49 ARVLKEEGNALYKSGDFAKAIEKYSLA-SKSAHASQEDRAVYFANRAAAHLKLQDFEQVVKDASKALELKPGYVKALSRRQEAREALKEWHGALQDAQELKA-------SSSEIKRLQFLAQEKDKKDQAEALESLKGLGDSILSNFGMSLDDFAMDKDPETGSYSIRMKQ 211
            A +LK+EGN LY   D   A+ KY  A  K+  AS + RAVY+AN AA HLK + FE  V+D++ ALEL P YVKAL RR  A E L +   +L               + + + RL  + +E+ +K + E L  LK LG+++L   G+SLD+F  +KDP TGSYSI   Q
Sbjct:   31 AELLKKEGNELYAINDIDGAVAKYEEALQKAPEASTKQRAVYYANLAACHLKCRQFEDAVQDSTAALELDPDYVKALMRRSAAYEELDDMEHSLXXXXXXXXXXXXNTLAKNTVLRLTPVVKERQEKMKDEMLGKLKDLGNTLLGKVGLSLDNFKAEKDPNTGSYSINFSQ 201          
The following BLAST results are available for this feature:
BLAST of Ggra6732.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGP07.450e-8266.19Tetratricopeptide repeat protein 1 n=1 Tax=Gracila... [more]
Q7XZ741.960e-5457.14Translocase (Fragment) n=1 Tax=Griffithsia japonic... [more]
A0A7S0WL984.040e-3244.12Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A150FY135.030e-3045.61Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A7I8KSR86.700e-3041.81Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]
A0A8B9AXH33.730e-2943.60LOW QUALITY PROTEIN: tetratricopeptide repeat prot... [more]
A0A0M0J4225.990e-2944.71Tetratricopeptide repeat protein 1-like protein n=... [more]
M2WQH71.870e-2841.72Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A836C5E52.600e-2844.44Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
I0YWQ63.630e-2842.69TPR protein n=1 Tax=Coccomyxa subellipsoidea (stra... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 127..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR46014TETRATRICOPEPTIDE REPEAT PROTEIN 1coord: 18..211
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 87..120
e-value: 0.002
score: 27.4
coord: 49..82
e-value: 3.1
score: 16.8
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 87..120
score: 8.1719
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 45..180
e-value: 2.1E-29
score: 103.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 49..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:316719..317354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6732.t1Ggra6732.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 316719..317354 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6732.t1 ID=Ggra6732.t1|Name=Ggra6732.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=212bp
MSSARDAEEEYMRMRMASTKLSDEDQSESQAPETKANPELDDTITADAAR
VLKEEGNALYKSGDFAKAIEKYSLASKSAHASQEDRAVYFANRAAAHLKL
QDFEQVVKDASKALELKPGYVKALSRRQEAREALKEWHGALQDAQELKAS
SSEIKRLQFLAQEKDKKDQAEALESLKGLGDSILSNFGMSLDDFAMDKDP
ETGSYSIRMKQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf