Ggra6721.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6721.t1
Unique NameGgra6721.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length104
Homology
BLAST of Ggra6721.t1 vs. uniprot
Match: A0A2V3IYF7 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYF7_9FLOR)

HSP 1 Score: 142 bits (357), Expect = 6.140e-42
Identity = 72/103 (69.90%), Postives = 87/103 (84.47%), Query Frame = 0
Query:    1 MAFITATPILARPTTALNTTSFSTRRAVAAAPVRRAAVRMVSEEPKFEKIPQGFTGFSEVLNGRAAMMGFLLAVITEAITGKGILGQVGSIFEIVNLSSALGN 103
            MAF++ TPI++R  TA+   S ++RR+VA  PVRRAA+RM  E P+ EKIPQGFT FSE+LNGRAAM+GF LAV+TE ITGKGILGQVGS+FEIVNL+SALGN
Sbjct:    1 MAFVSPTPIISRTNTAVGAASITSRRSVAVTPVRRAALRMAGEGPEMEKIPQGFTSFSELLNGRAAMLGFTLAVVTELITGKGILGQVGSVFEIVNLASALGN 103          
BLAST of Ggra6721.t1 vs. uniprot
Match: A0A2V3IYN0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYN0_9FLOR)

HSP 1 Score: 105 bits (262), Expect = 1.730e-27
Identity = 56/101 (55.45%), Postives = 80/101 (79.21%), Query Frame = 0
Query:    2 AFITATPILARPTTALNTTSFSTRRAVAAAPVRRAAVRMVSEEPKFEKIPQGFTGFSEVLNGRAAMMGFLLAVITEAITGKGILGQVGSIFEIVNLSSALG 102
            AF+ ATP+LAR   +++ TSF T R++ A P RR+A  M++++   E+IPQGFT FSEVLNGRAAM+G +LA++TEAITGKGI+GQV ++ +I +++ ALG
Sbjct:    5 AFVAATPVLARTIPSVSNTSF-TSRSIVALPARRSATIMMADK---ERIPQGFTAFSEVLNGRAAMLGIVLAIVTEAITGKGIVGQVAALGDIASITHALG 101          
BLAST of Ggra6721.t1 vs. uniprot
Match: A0A1X6NU51 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NU51_PORUM)

HSP 1 Score: 62.8 bits (151), Expect = 2.030e-10
Identity = 48/112 (42.86%), Postives = 61/112 (54.46%), Query Frame = 0
Query:    1 MAFI---TATPILARPTTAL---NTTSFSTRRAVAAAPVRR-AAVRMVSEEP---KFEKI--------------PQGFTGFSEVLNGRAAMMGFLLAVITEAITGKGILGQV 88
            MAF+    A P  ARP TA     T++F    ++AAAP  R AAV MV E+P   KF K+              PQG+T FSEV+NGR AM+GF   ++ E  TG+ I  QV
Sbjct:    1 MAFVGSAVALPTAARPATAAVSARTSTFVAPLSLAAAPAARGAAVMMVGEDPQNRKFNKVARDAEAKIEAQSNRPQGWTRFSEVVNGRGAMIGFAAGLVVELATGQSIYNQV 112          
BLAST of Ggra6721.t1 vs. uniprot
Match: B0BZB4 (High light inducible protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) TaxID=329726 RepID=B0BZB4_ACAM1)

HSP 1 Score: 56.2 bits (134), Expect = 1.180e-8
Identity = 27/41 (65.85%), Postives = 33/41 (80.49%), Query Frame = 0
Query:   53 GFTGFSEVLNGRAAMMGFLLAVITEAITGKGILGQVGSIFE 93
            GF+ FSE  NGR AM+GF LA+ITEA+TGKGILGQ+ + F 
Sbjct:    8 GFSAFSETWNGRLAMIGFTLAIITEALTGKGILGQLVAWFS 48          
BLAST of Ggra6721.t1 vs. uniprot
Match: K9S5A3 (CAB/ELIP/HLIP family protein n=1 Tax=Geitlerinema sp. PCC 7407 TaxID=1173025 RepID=K9S5A3_9CYAN)

HSP 1 Score: 55.8 bits (133), Expect = 1.590e-8
Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:   40 MVSEEPKFEKIPQGFTGFSEVLNGRAAMMGFLLAVITEAITGKGILGQVG 89
            M ++EPKF     GFT F+E  NGR AM+GF++ +ITE +TG+GIL Q+G
Sbjct:    1 MENQEPKF-----GFTNFAETWNGRLAMLGFVVGLITELVTGQGILSQLG 45          
BLAST of Ggra6721.t1 vs. uniprot
Match: A0A2V3IEM4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEM4_9FLOR)

HSP 1 Score: 57.8 bits (138), Expect = 1.630e-8
Identity = 37/86 (43.02%), Postives = 50/86 (58.14%), Query Frame = 0
Query:    8 PILARPTTALNTTSFSTRRAVAAAPVRRAAVRMVSEEPKFEKIPQGFTGFSEVLNGRAAMMGFLLAVITEAITGKGILGQVGSIFE 93
            P  A P  AL T S   +++   +     A R+ SE     + PQGFT ++E +NGR A MGFL+A+ITE ITGKGI  Q+  +F 
Sbjct:   33 PFSAAPRMALTTNSADKKKSTFTSIEDNRAARLDSEY----RGPQGFTPYAEKVNGRLAQMGFLIALITEIITGKGINEQILIMFS 114          
BLAST of Ggra6721.t1 vs. uniprot
Match: A0A4P7ZQM1 (Uncharacterized protein n=1 Tax=Synechococcus sp. CB0101 TaxID=232348 RepID=A0A4P7ZQM1_9SYNE)

HSP 1 Score: 55.5 bits (132), Expect = 2.520e-8
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:   40 MVSEEPKFEKIPQGFTGFSEVLNGRAAMMGFLLAVITEAITGKGILGQVG 89
            M S + K      GF  F+E LNGR AM+GF++A+ TEA++GKGILGQ+G
Sbjct:    1 MASSDFKIPYQRTGFVPFAESLNGRLAMLGFVIAIATEALSGKGILGQLG 50          
BLAST of Ggra6721.t1 vs. uniprot
Match: chlorophyll a/b-binding protein n=1 Tax=Acaryochloris sp. CCMEE 5410 TaxID=310037 RepID=UPI0002483FDE (chlorophyll a/b-binding protein n=1 Tax=Acaryochloris sp. CCMEE 5410 TaxID=310037 RepID=UPI0002483FDE)

HSP 1 Score: 54.7 bits (130), Expect = 4.840e-8
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 0
Query:   41 VSEEPKFEKIPQGFTGFSEVLNGRAAMMGFLLAVITEAITGKGILGQ 87
            ++ +P F     GF+ FSE  NGR AM+GF LA+ITEA+TGKGI+GQ
Sbjct:    1 MNSQPSFT----GFSAFSETWNGRLAMIGFTLALITEALTGKGIIGQ 43          
BLAST of Ggra6721.t1 vs. uniprot
Match: B0CA31 (High light inducible protein n=3 Tax=Acaryochloridaceae TaxID=1890429 RepID=B0CA31_ACAM1)

HSP 1 Score: 54.7 bits (130), Expect = 5.060e-8
Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 0
Query:   53 GFTGFSEVLNGRAAMMGFLLAVITEAITGKGILGQVGSIFEIVN 96
            GF  F+E  +GR AM GF +A++TEA+TGKGILGQ+ + F  VN
Sbjct:    9 GFNSFAETFSGRLAMWGFFVALVTEALTGKGILGQLTAFFFFVN 52          
BLAST of Ggra6721.t1 vs. uniprot
Match: A8ZP27 (Conserved domain protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) TaxID=329726 RepID=A8ZP27_ACAM1)

HSP 1 Score: 54.3 bits (129), Expect = 6.850e-8
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query:   53 GFTGFSEVLNGRAAMMGFLLAVITEAITGKGILGQVGSIF 92
            GF+ FSE  NGR AM+GF LA+ITEA+TG+GI+GQ+ S F
Sbjct:    9 GFSAFSETWNGRLAMIGFTLALITEALTGEGIIGQIISWF 48          
The following BLAST results are available for this feature:
BLAST of Ggra6721.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYF76.140e-4269.90Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IYN01.730e-2755.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NU512.030e-1042.86Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
B0BZB41.180e-865.85High light inducible protein n=1 Tax=Acaryochloris... [more]
K9S5A31.590e-854.00CAB/ELIP/HLIP family protein n=1 Tax=Geitlerinema ... [more]
A0A2V3IEM41.630e-843.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A4P7ZQM12.520e-854.00Uncharacterized protein n=1 Tax=Synechococcus sp. ... [more]
chlorophyll a/b-binding protein n=1 Tax=Acaryochloris sp. CCMEE 5410 TaxID=310037 RepID=UPI0002483FDE4.840e-857.45chlorophyll a/b-binding protein n=1 Tax=Acaryochlo... [more]
B0CA315.060e-856.82High light inducible protein n=3 Tax=Acaryochlorid... [more]
A8ZP276.850e-865.00Conserved domain protein n=1 Tax=Acaryochloris mar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 27..95
e-value: 4.9E-6
score: 28.5
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 52..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:288172..288483 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6721.t1Ggra6721.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 288172..288483 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6721.t1 ID=Ggra6721.t1|Name=Ggra6721.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=104bp
MAFITATPILARPTTALNTTSFSTRRAVAAAPVRRAAVRMVSEEPKFEKI
PQGFTGFSEVLNGRAAMMGFLLAVITEAITGKGILGQVGSIFEIVNLSSA
LGN*
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