Ggra2632.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2632.t1
Unique NameGgra2632.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length295
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:996933..997817 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2632Ggra2632Gracilaria gracilis GNS1m malegenetig00000005_pilon 996933..997817 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2632.t1.stop1Ggra2632.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000005_pilon 996933..996935 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2632.t1.CDS1Ggra2632.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000005_pilon 996933..997817 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2632.t1.exon1Ggra2632.t1.exon1Gracilaria gracilis GNS1m maleexontig00000005_pilon 996933..997817 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2632.t1.start1Ggra2632.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000005_pilon 997815..997817 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2632.t1Ggra2632.t1Gracilaria gracilis GNS1m malepolypeptidetig00000005_pilon 996933..997817 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2632.t1 ID=Ggra2632.t1|Name=Ggra2632.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=295bp
MPDVVPTDSSETAANGTESVSQVQTSEADAQPGKFEMSEIERIKAAHAAR
RSRRSRGASSLAVPSPAESKSQDAPKDEDPAVAKVRKEYEEQISKLTQDA
STMKLEMASLRRNHLQNIKQISQSRDMFAMQLAKEQTGGAKTSTAGTKKL
EDMEVQLRAARTRNNDLEAENNVLREEVKQLNFRVQASKTLDAASDGYEK
IVSELVETKVKCAQLEEEKEELLRMNKELSSTSHVLREANGELEKSRSHW
VVQCAEIEKQRTELESKLKEYENATNTTNEAPSDTGSLQDVKLN*
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spliced messenger RNA

>Ggra2632.t1 ID=Ggra2632.t1|Name=Ggra2632.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=885bp|location=Sequence derived from alignment at tig00000005_pilon:996933..997817- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGGACGTTGTACCTACAGACTCGTCAGAAACTGCAGCCAACGGTAC
CGAATCTGTTTCCCAAGTACAAACTTCTGAAGCTGATGCTCAGCCGGGCA
AATTTGAAATGTCTGAAATCGAGAGAATCAAAGCTGCCCATGCCGCTCGT
CGATCACGCCGCTCGCGCGGCGCTTCATCCCTCGCCGTCCCATCACCGGC
GGAATCGAAATCGCAAGACGCACCAAAAGATGAAGACCCCGCAGTTGCAA
AAGTTCGAAAAGAATATGAAGAGCAGATCTCAAAGCTCACTCAGGATGCG
AGCACCATGAAGCTGGAAATGGCCTCGTTGCGAAGAAACCACTTGCAGAA
CATCAAACAGATTTCTCAATCCCGCGATATGTTTGCCATGCAACTTGCGA
AGGAGCAGACTGGCGGTGCGAAAACCTCCACTGCGGGCACCAAAAAGCTG
GAGGACATGGAGGTGCAGCTTCGAGCAGCCAGGACCAGGAACAATGATCT
GGAGGCCGAAAACAATGTGTTACGAGAGGAGGTAAAACAACTAAACTTCA
GAGTGCAGGCCAGTAAGACTCTGGATGCTGCATCCGATGGATACGAGAAA
ATCGTTTCAGAGTTGGTAGAGACCAAGGTGAAATGTGCTCAGCTTGAAGA
GGAGAAAGAAGAGCTTCTGCGCATGAATAAGGAACTGTCTTCCACTTCAC
ATGTGCTGCGCGAAGCGAACGGTGAGCTCGAAAAGAGTAGGTCCCATTGG
GTTGTTCAGTGTGCTGAAATCGAGAAGCAAAGAACCGAGTTGGAATCAAA
GCTAAAGGAATACGAAAACGCGACGAATACCACCAACGAGGCACCATCGG
ACACTGGCTCGTTACAGGACGTCAAGCTCAACTAA
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protein sequence of Ggra2632.t1

>Ggra2632.t1 ID=Ggra2632.t1|Name=Ggra2632.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=295bp
MPDVVPTDSSETAANGTESVSQVQTSEADAQPGKFEMSEIERIKAAHAAR
RSRRSRGASSLAVPSPAESKSQDAPKDEDPAVAKVRKEYEEQISKLTQDA
STMKLEMASLRRNHLQNIKQISQSRDMFAMQLAKEQTGGAKTSTAGTKKL
EDMEVQLRAARTRNNDLEAENNVLREEVKQLNFRVQASKTLDAASDGYEK
IVSELVETKVKCAQLEEEKEELLRMNKELSSTSHVLREANGELEKSRSHW
VVQCAEIEKQRTELESKLKEYENATNTTNEAPSDTGSLQDVKLN*
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mRNA from alignment at tig00000005_pilon:996933..997817-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2632.t1 ID=Ggra2632.t1|Name=Ggra2632.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=885bp|location=Sequence derived from alignment at tig00000005_pilon:996933..997817- (Gracilaria gracilis GNS1m male)
ATGCCGGACGTTGTACCTACAGACTCGTCAGAAACTGCAGCCAACGGTAC
CGAATCTGTTTCCCAAGTACAAACTTCTGAAGCTGATGCTCAGCCGGGCA
AATTTGAAATGTCTGAAATCGAGAGAATCAAAGCTGCCCATGCCGCTCGT
CGATCACGCCGCTCGCGCGGCGCTTCATCCCTCGCCGTCCCATCACCGGC
GGAATCGAAATCGCAAGACGCACCAAAAGATGAAGACCCCGCAGTTGCAA
AAGTTCGAAAAGAATATGAAGAGCAGATCTCAAAGCTCACTCAGGATGCG
AGCACCATGAAGCTGGAAATGGCCTCGTTGCGAAGAAACCACTTGCAGAA
CATCAAACAGATTTCTCAATCCCGCGATATGTTTGCCATGCAACTTGCGA
AGGAGCAGACTGGCGGTGCGAAAACCTCCACTGCGGGCACCAAAAAGCTG
GAGGACATGGAGGTGCAGCTTCGAGCAGCCAGGACCAGGAACAATGATCT
GGAGGCCGAAAACAATGTGTTACGAGAGGAGGTAAAACAACTAAACTTCA
GAGTGCAGGCCAGTAAGACTCTGGATGCTGCATCCGATGGATACGAGAAA
ATCGTTTCAGAGTTGGTAGAGACCAAGGTGAAATGTGCTCAGCTTGAAGA
GGAGAAAGAAGAGCTTCTGCGCATGAATAAGGAACTGTCTTCCACTTCAC
ATGTGCTGCGCGAAGCGAACGGTGAGCTCGAAAAGAGTAGGTCCCATTGG
GTTGTTCAGTGTGCTGAAATCGAGAAGCAAAGAACCGAGTTGGAATCAAA
GCTAAAGGAATACGAAAACGCGACGAATACCACCAACGAGGCACCATCGG
ACACTGGCTCGTTACAGGACGTCAAGCTCAACTAA
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Coding sequence (CDS) from alignment at tig00000005_pilon:996933..997817-

>Ggra2632.t1 ID=Ggra2632.t1|Name=Ggra2632.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=885bp|location=Sequence derived from alignment at tig00000005_pilon:996933..997817- (Gracilaria gracilis GNS1m male)
ATGCCGGACGTTGTACCTACAGACTCGTCAGAAACTGCAGCCAACGGTAC
CGAATCTGTTTCCCAAGTACAAACTTCTGAAGCTGATGCTCAGCCGGGCA
AATTTGAAATGTCTGAAATCGAGAGAATCAAAGCTGCCCATGCCGCTCGT
CGATCACGCCGCTCGCGCGGCGCTTCATCCCTCGCCGTCCCATCACCGGC
GGAATCGAAATCGCAAGACGCACCAAAAGATGAAGACCCCGCAGTTGCAA
AAGTTCGAAAAGAATATGAAGAGCAGATCTCAAAGCTCACTCAGGATGCG
AGCACCATGAAGCTGGAAATGGCCTCGTTGCGAAGAAACCACTTGCAGAA
CATCAAACAGATTTCTCAATCCCGCGATATGTTTGCCATGCAACTTGCGA
AGGAGCAGACTGGCGGTGCGAAAACCTCCACTGCGGGCACCAAAAAGCTG
GAGGACATGGAGGTGCAGCTTCGAGCAGCCAGGACCAGGAACAATGATCT
GGAGGCCGAAAACAATGTGTTACGAGAGGAGGTAAAACAACTAAACTTCA
GAGTGCAGGCCAGTAAGACTCTGGATGCTGCATCCGATGGATACGAGAAA
ATCGTTTCAGAGTTGGTAGAGACCAAGGTGAAATGTGCTCAGCTTGAAGA
GGAGAAAGAAGAGCTTCTGCGCATGAATAAGGAACTGTCTTCCACTTCAC
ATGTGCTGCGCGAAGCGAACGGTGAGCTCGAAAAGAGTAGGTCCCATTGG
GTTGTTCAGTGTGCTGAAATCGAGAAGCAAAGAACCGAGTTGGAATCAAA
GCTAAAGGAATACGAAAACGCGACGAATACCACCAACGAGGCACCATCGG
ACACTGGCTCGTTACAGGACGTCAAGCTCAACTAA
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