Ggra6800.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6800.t1
Unique NameGgra6800.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length116
Homology
BLAST of Ggra6800.t1 vs. uniprot
Match: A0A2V3IPT5 (60S ribosomal protein L26-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPT5_9FLOR)

HSP 1 Score: 224 bits (570), Expect = 1.260e-73
Identity = 111/115 (96.52%), Postives = 114/115 (99.13%), Query Frame = 0
Query:    1 MSAPLSAELRQKYNVRSLPIRKHDEVRVVRGQYKGEGKVLTCYRKKYVVHIERITRERANQMPVPIGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVPMADVD 115
            MSAPLS+ELRQKYNVRSLPIRKHDEVRVVRG YKGEGKVLTCYRKKYVVHIERITRE+ANQMPVP+GIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVPMADVD
Sbjct:   30 MSAPLSSELRQKYNVRSLPIRKHDEVRVVRGHYKGEGKVLTCYRKKYVVHIERITREKANQMPVPVGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVPMADVD 144          
BLAST of Ggra6800.t1 vs. uniprot
Match: Q7XY99 (Ribosome protein L26 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XY99_GRIJA)

HSP 1 Score: 210 bits (535), Expect = 2.730e-68
Identity = 103/115 (89.57%), Postives = 110/115 (95.65%), Query Frame = 0
Query:    1 MSAPLSAELRQKYNVRSLPIRKHDEVRVVRGQYKGEGKVLTCYRKKYVVHIERITRERANQMPVPIGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVPMADVD 115
            MS+PLS ELRQKY VRSLPIRKHDEVRVVRGQYKGEGKV+TCYRKKYVVHIERITRERANQMPVP+GIHPSNCVITKI+MDKDRK+ILDRKNRE KQ+KGKFSE+DV V MADVD
Sbjct:   30 MSSPLSPELRQKYKVRSLPIRKHDEVRVVRGQYKGEGKVITCYRKKYVVHIERITRERANQMPVPVGIHPSNCVITKIRMDKDRKSILDRKNRETKQDKGKFSEADVGVAMADVD 144          
BLAST of Ggra6800.t1 vs. uniprot
Match: R7QKP4 (Ribosomal protein L26 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKP4_CHOCR)

HSP 1 Score: 198 bits (504), Expect = 1.450e-63
Identity = 96/115 (83.48%), Postives = 109/115 (94.78%), Query Frame = 0
Query:    1 MSAPLSAELRQKYNVRSLPIRKHDEVRVVRGQYKGEGKVLTCYRKKYVVHIERITRERANQMPVPIGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVPMADVD 115
            MSA LS+ELRQK+NVRSLP+RK DEV++VRG +KG+GKVLTCYRKKYVVH+ER T+E+ANQMPVP+GIHPSN VITKIKMDKDRKAILDRKNREAKQ+KGKFSE +VNVPMADVD
Sbjct:   30 MSAALSSELRQKHNVRSLPLRKGDEVKIVRGNFKGDGKVLTCYRKKYVVHVERCTKEKANQMPVPVGIHPSNMVITKIKMDKDRKAILDRKNREAKQDKGKFSEGEVNVPMADVD 144          
BLAST of Ggra6800.t1 vs. uniprot
Match: M2VUW9 (60S ribosomal protein L26e n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VUW9_GALSU)

HSP 1 Score: 158 bits (400), Expect = 4.290e-48
Identity = 83/118 (70.34%), Postives = 99/118 (83.90%), Query Frame = 0
Query:    1 MSAPLSAELRQKYNVRSLPIRKHDEVRVVRGQYKG-EGKVLTCYRKKYVVHIERITRERANQMPVPIGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGK--FSESDVNVPMADVD 115
            MSAPLS ELR KYNVRSLPIRK DEV +VRG YKG EGKV TCYRKKY +H+ER+TRE+AN M VP+GIHPSN VI+K+K+DKDRKA L+RKNR+   +KGK  F+E++V+  MADVD
Sbjct:    1 MSAPLSKELRTKYNVRSLPIRKEDEVIIVRGAYKGREGKVTTCYRKKYRIHVERVTREKANGMTVPVGIHPSNVVISKLKLDKDRKATLERKNRDRLMDKGKGKFTEAEVSA-MADVD 117          
BLAST of Ggra6800.t1 vs. uniprot
Match: A0A7S1TM20 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TM20_9RHOD)

HSP 1 Score: 155 bits (393), Expect = 1.350e-46
Identity = 84/120 (70.00%), Postives = 94/120 (78.33%), Query Frame = 0
Query:    1 MSAPLSAELRQKYNVRSLPIRKHDEVRVVRGQYKG-EGKVLTCYRKKYVVHIERITRERANQMPVPIGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVP----MADVD 115
            MSAPLS ELR KYNVRSLPIRK DEV V RGQYKG EGKV+TCYRKKYV++++R+ RE+ N   VPIGIHPSN  ITKIK+DKDRKAIL+RKNR A  EKGK   +D  V     MADVD
Sbjct:   30 MSAPLSQELRSKYNVRSLPIRKDDEVLVQRGQYKGREGKVVTCYRKKYVIYLDRVQREKVNGQTVPIGIHPSNVTITKIKLDKDRKAILERKNRSAALEKGKGKFTDAEVQGGAAMADVD 149          
BLAST of Ggra6800.t1 vs. uniprot
Match: A0A7S0HHD8 (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HHD8_9EUKA)

HSP 1 Score: 155 bits (392), Expect = 3.150e-46
Identity = 81/118 (68.64%), Postives = 98/118 (83.05%), Query Frame = 0
Query:    1 MSAPLSAELRQKYNVRSLPIRKHDEVRVVRGQYKG-EGKVLTCYRKKYVVHIERITRERANQMPVPIGIHPSNCVITKIKMDKDRKAILDRKNREAKQE--KGKFSESDVNVPMADVD 115
            MS+ LS+ELR KY+VRS+P+RK DEV VVRG YKG EGKV+ CYRKK+V+H+ERITRE+A+   V +GIHPS CVITK+K+DKDRK+ILDRKNR+ K +  KGKFSE D  V MADVD
Sbjct:   50 MSSALSSELRNKYHVRSMPVRKDDEVSVVRGTYKGREGKVIQCYRKKWVIHVERITREKASGATVQVGIHPSKCVITKLKLDKDRKSILDRKNRDTKSDAAKGKFSEKD--VAMADVD 165          
BLAST of Ggra6800.t1 vs. uniprot
Match: A0A7S1XEL1 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEL1_9RHOD)

HSP 1 Score: 151 bits (382), Expect = 5.810e-45
Identity = 79/118 (66.95%), Postives = 99/118 (83.90%), Query Frame = 0
Query:    1 MSAPLSAELRQKYNVRSLPIRKHDEVRVVRGQYKG-EGKVLTCYRKKYVVHIERITRERANQMPVPIGIHPSNCVITKIKMDKDRKAILDRKNREA--KQEKGKFSESDVNVPMADVD 115
            MSAPLS+ELRQK+NVRS+P+RK DEV++VRG +KG EGKV TCYRKK+V+HIER+TRE+ +   VP+GIHPSN VITK+K+DKDRKA+L+RKNR A  K  KGK++ S+V    ADVD
Sbjct:   30 MSAPLSSELRQKHNVRSIPVRKDDEVQIVRGTFKGREGKVSTCYRKKFVIHIERLTREKVSGATVPVGIHPSNVVITKLKLDKDRKALLERKNRSAADKGGKGKYTVSEVTA-NADVD 146          
BLAST of Ggra6800.t1 vs. uniprot
Match: A0A7S3B8W9 (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B8W9_9EUKA)

HSP 1 Score: 149 bits (377), Expect = 3.780e-44
Identity = 76/116 (65.52%), Postives = 95/116 (81.90%), Query Frame = 0
Query:    1 MSAPLSAELRQKYNVRSLPIRKHDEVRVVRGQYKG-EGKVLTCYRKKYVVHIERITRERANQMPVPIGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVPMADVD 115
            MSA LS+ELR KY+VRS+P+RK DEV VVRG YKG EGKV+ CYRKK+V+H+ERITRE+A+   V +GI+ S CVITK+K+DKDRKAIL+RKN+E K +KGK   ++  V MADVD
Sbjct:   35 MSAALSSELRNKYHVRSMPVRKDDEVSVVRGTYKGREGKVIQCYRKKWVIHVERITREKASGATVQVGINTSKCVITKLKLDKDRKAILERKNKENKSDKGKGKFTEQEVAMADVD 150          
BLAST of Ggra6800.t1 vs. uniprot
Match: A0A0M0JHZ3 (60s ribosomal protein l26-1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JHZ3_9EUKA)

HSP 1 Score: 157 bits (397), Expect = 6.810e-43
Identity = 80/116 (68.97%), Postives = 96/116 (82.76%), Query Frame = 0
Query:    1 MSAPLSAELRQKYNVRSLPIRKHDEVRVVRGQYKG-EGKVLTCYRKKYVVHIERITRERANQMPVPIGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGKFSESDVNVPMADVD 115
            MSA LS+ELR KY+VRS+P+RK DEV VVRG YKG EGKV+ CYRKK+V+HIERITRE+A+   V +GIHPS CVITK+K+DKDRKAILDRKN E K +KGK   ++ +V MADVD
Sbjct:  502 MSAALSSELRNKYHVRSMPVRKDDEVNVVRGTYKGREGKVIQCYRKKWVIHIERITREKASGATVQVGIHPSKCVITKLKLDKDRKAILDRKNSETKTDKGKGKFTEKDVAMADVD 617          
BLAST of Ggra6800.t1 vs. uniprot
Match: A0A5J4Z1K4 (60S ribosomal protein L26 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1K4_PORPP)

HSP 1 Score: 143 bits (361), Expect = 1.020e-41
Identity = 75/110 (68.18%), Postives = 90/110 (81.82%), Query Frame = 0
Query:    1 MSAPLSAELRQKYNVRSLPIRKHDEVRVVRGQYKG-EGKVLTCYRKKYVVHIERITRERANQMPVPIGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKGK--FSESDV 107
            MSAPLS ELR KYNVRSLPIRK DEV + RG  KG +GKV TCYRKK+V++I+R+ RE+ N   +PIG+HPSN VITKIK+DKDRKAIL+RKNR A  EKGK  F+E++V
Sbjct:   30 MSAPLSRELRTKYNVRSLPIRKDDEVMIQRGALKGRDGKVTTCYRKKFVIYIDRVLREKKNGQTMPIGVHPSNVVITKIKLDKDRKAILERKNRSAAIEKGKGKFTEAEV 139          
The following BLAST results are available for this feature:
BLAST of Ggra6800.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPT51.260e-7396.5260S ribosomal protein L26-1 n=1 Tax=Gracilariopsis... [more]
Q7XY992.730e-6889.57Ribosome protein L26 n=1 Tax=Griffithsia japonica ... [more]
R7QKP41.450e-6383.48Ribosomal protein L26 n=1 Tax=Chondrus crispus Tax... [more]
M2VUW94.290e-4870.3460S ribosomal protein L26e n=1 Tax=Galdieria sulph... [more]
A0A7S1TM201.350e-4670.00Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S0HHD83.150e-4668.64Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S1XEL15.810e-4566.95Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S3B8W93.780e-4465.52Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A0M0JHZ36.810e-4368.9760s ribosomal protein l26-1 n=1 Tax=Chrysochromuli... [more]
A0A5J4Z1K41.020e-4168.1860S ribosomal protein L26 n=1 Tax=Porphyridium pur... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 78..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..115
NoneNo IPR availablePANTHERPTHR11143:SF1060S RIBOSOMAL PROTEIN L26-LIKE 1coord: 1..106
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 1..110
e-value: 1.4E-40
score: 140.5
IPR005756Ribosomal protein L26/L24, eukaryotic/archaealTIGRFAMTIGR01080TIGR01080coord: 1..91
e-value: 5.4E-34
score: 115.0
IPR005756Ribosomal protein L26/L24, eukaryotic/archaealPFAMPF16906Ribosomal_L26coord: 1..91
e-value: 4.3E-26
score: 91.2
IPR005756Ribosomal protein L26/L24, eukaryotic/archaealPANTHERPTHR1114360S RIBOSOMAL PROTEIN L26 FAMILY MEMBERcoord: 1..106
IPR041988Ribosomal protein L26/L24, KOW domainCDDcd06089KOW_RPL26coord: 24..75
e-value: 3.20675E-12
score: 55.2134
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 1..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:545436..545783 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6800.t1Ggra6800.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 545436..545783 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6800.t1 ID=Ggra6800.t1|Name=Ggra6800.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=116bp
MSAPLSAELRQKYNVRSLPIRKHDEVRVVRGQYKGEGKVLTCYRKKYVVH
IERITRERANQMPVPIGIHPSNCVITKIKMDKDRKAILDRKNREAKQEKG
KFSESDVNVPMADVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014722Rib_L2_dom2
IPR005756Ribosomal_L26/L24P_euk/arc
IPR041988KOW_RPL26/RPL24
IPR008991Translation_prot_SH3-like_sf