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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 1173022.Cri9333_4308 |
| PFAMs | GDE_C,GDE_N |
| Max annot lvl | 1117|Cyanobacteria |
| Evalue | 8.16e-204 |
| EggNOG OGs | COG3408@1|root,COG3408@2|Bacteria,1G2AS@1117|Cyanobacteria,1H7MX@1150|Oscillatoriales |
| Description | Glycogen debranching enzyme |
| COG category | G |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra6742.t1.stop1 | Ggra6742.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000056_pilon 329338..329340 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra6742.t1.start1 | Ggra6742.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000056_pilon 331998..332000 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra6742.t1 ID=Ggra6742.t1|Name=Ggra6742.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=776bp MLNCDLPTDVVYVGREVCGELPMAEAREVLVTNGIGGYGSMTLAGSLSRS YHGLLVAALRPPLDRTLLLSKLCETVFYHGKDYHLSTDRRKKNVLKRQAV IARSPSGHRSTPSSNGGVTRADRFDSVPPVWRNDGISTTLSKLRDDEVVT PAGFELMDSFRLEGTVPVFSYSLGDAVLEKRIWMKHGQNTVYVTYYLRRA TEAIELRMQALVNHRNHHDRTSGLRPNFNYSANVGRNGSTVSVLFTTREH HETTLTMMVSRGTADLTNEWMRGFVLSEERMRGLPHVDDNLHAATFIVEL PPGGVATFVATAESNASQLSLDGEAELAMQHAYERSLLQKFDDARYKAFQ RRMETEDRIPCSESSPYSDSSRSAYMKRRRRRRSVEPSIKQLVLAADQFI ISRGGGRSVVAGFHWFTDWARDTMISLPGLTIVTGRYDVARSILQTFSKY VSLGMLPNRFPDDGSAPTETDYDNADGTLWYFEAIRAYYMASGDLELLLE LFPILQDIVRHHCNGTRFGIVQDKDGLLHAGSPGLALTWMDAKTDVVYTQ RDGKAVELAALWYNALNCMAFFASELEKEDDSDVFTGMADITEQSFQEKF WNAELGYCYDVIEGGEDRTNMDCSLRPNQLIAASLNWSPLTEEQRFLVLG ACSTHLLTSHAVRTLSPKEKKYQGVYLGDVFARDNAYHQGIGWAWLLGPF VLSHLRVFGNRELAREFLLPVLRSHLNDAGVGQVSELFDGDAPHRARGCI AQAWSVAELLRAWMATEPEDFFEDE* back to topspliced messenger RNA >Ggra6742.t1 ID=Ggra6742.t1|Name=Ggra6742.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2328bp|location=Sequence derived from alignment at tig00000056_pilon:329338..332000- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCTGAACTGTGATTTACCTACAGATGTTGTTTATGTCGGCCGCGAAGT TTGCGGGGAGTTACCTATGGCAGAGGCTCGAGAGGTACTTGTTACGAACG GAATAGGAGGTTATGGGTCGATGACGCTGGCGGGGTCTCTCAGTCGTTCA TATCACGGGCTTCTAGTAGCGGCACTTCGACCACCCTTGGATCGAACACT CCTGCTGTCCAAGCTTTGCGAGACTGTCTTCTATCATGGCAAAGATTACC ACCTCTCCACAGATCGCCGAAAGAAGAACGTACTGAAGCGACAAGCTGTA ATTGCGCGATCTCCTAGTGGTCACAGAAGTACACCTTCAAGCAACGGAGG TGTAACACGGGCTGATCGATTCGATTCAGTTCCACCCGTTTGGCGCAATG ACGGTATATCCACAACTCTTTCAAAGCTCCGCGATGATGAAGTAGTGACG CCAGCAGGTTTCGAGCTCATGGACTCATTTCGCTTGGAGGGTACGGTGCC AGTCTTTTCATATTCCCTTGGAGACGCCGTGTTAGAAAAGCGCATATGGA TGAAGCATGGTCAAAATACGGTATACGTTACTTATTATCTTCGTCGTGCT ACAGAAGCGATTGAGCTCCGAATGCAAGCTTTAGTCAATCACCGGAACCA TCATGACAGAACCTCTGGCTTGAGACCCAATTTTAACTACTCTGCAAATG TCGGTAGAAATGGGTCAACGGTATCTGTGCTGTTTACCACTCGTGAGCAT CACGAAACTACGCTCACTATGATGGTTAGCCGGGGTACGGCGGACCTAAC CAATGAGTGGATGCGCGGGTTTGTTCTTTCCGAAGAGCGTATGCGAGGAC TTCCGCATGTTGATGACAACTTGCACGCGGCGACCTTCATAGTTGAACTG CCACCAGGAGGAGTAGCGACTTTTGTAGCGACAGCTGAGAGTAATGCTTC ACAACTGAGTTTGGATGGAGAGGCGGAACTGGCGATGCAACACGCTTACG AAAGATCACTTTTGCAGAAGTTCGACGACGCGCGATACAAGGCGTTCCAA AGAAGAATGGAAACAGAGGATAGAATTCCATGTTCGGAGTCATCTCCGTA CTCTGATTCTTCTCGTTCGGCTTATATGAAGCGAAGGCGAAGACGAAGAA GTGTTGAACCTAGCATCAAACAACTCGTGCTTGCCGCGGATCAGTTCATC ATCTCAAGAGGAGGAGGAAGGTCTGTTGTAGCCGGGTTTCATTGGTTCAC AGACTGGGCCAGGGATACAATGATATCTCTGCCAGGGTTAACGATTGTGA CCGGGCGATATGACGTTGCACGTTCGATTCTACAAACTTTCTCAAAGTAC GTGAGCCTGGGTATGTTACCGAACAGATTTCCAGATGACGGTTCAGCCCC AACGGAAACCGATTATGATAACGCAGATGGAACGCTATGGTATTTTGAGG CAATCCGCGCTTACTACATGGCATCCGGAGATTTGGAGCTTCTGTTGGAG CTGTTCCCCATCCTTCAAGACATTGTTCGTCATCACTGCAATGGAACAAG ATTTGGAATTGTACAAGATAAAGACGGATTACTCCATGCAGGATCACCGG GTTTAGCTCTGACCTGGATGGACGCGAAAACCGATGTTGTGTACACTCAA AGAGATGGCAAGGCTGTTGAGCTGGCCGCTCTGTGGTACAATGCTCTGAA TTGCATGGCCTTTTTCGCAAGCGAGCTTGAAAAGGAAGACGATAGCGATG TTTTCACTGGTATGGCCGACATTACCGAACAATCATTTCAGGAGAAGTTT TGGAATGCTGAGCTGGGATATTGTTATGATGTTATCGAAGGTGGTGAAGA TCGAACAAACATGGATTGCTCACTTCGACCCAATCAGCTTATTGCAGCTT CTCTAAACTGGAGTCCATTGACCGAAGAGCAACGATTCTTAGTGCTGGGT GCGTGTTCTACTCACTTACTAACGTCACACGCGGTAAGAACGCTTTCACC GAAAGAAAAAAAGTACCAAGGTGTTTATCTCGGTGACGTATTTGCCAGAG ATAACGCTTACCATCAGGGAATCGGATGGGCATGGCTGCTCGGTCCCTTT GTTCTTTCACATTTAAGGGTGTTTGGTAACCGCGAATTGGCGAGAGAATT CCTTCTACCTGTATTAAGATCACACCTTAATGACGCTGGCGTGGGCCAAG TTAGCGAGCTTTTCGATGGTGATGCTCCGCACAGGGCGCGTGGGTGTATT GCACAGGCATGGTCGGTTGCGGAACTGTTGAGAGCATGGATGGCAACCGA ACCGGAAGACTTTTTCGAGGACGAGTAG back to topprotein sequence of Ggra6742.t1 >Ggra6742.t1 ID=Ggra6742.t1|Name=Ggra6742.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=776bp
MLNCDLPTDVVYVGREVCGELPMAEAREVLVTNGIGGYGSMTLAGSLSRS YHGLLVAALRPPLDRTLLLSKLCETVFYHGKDYHLSTDRRKKNVLKRQAV IARSPSGHRSTPSSNGGVTRADRFDSVPPVWRNDGISTTLSKLRDDEVVT PAGFELMDSFRLEGTVPVFSYSLGDAVLEKRIWMKHGQNTVYVTYYLRRA TEAIELRMQALVNHRNHHDRTSGLRPNFNYSANVGRNGSTVSVLFTTREH HETTLTMMVSRGTADLTNEWMRGFVLSEERMRGLPHVDDNLHAATFIVEL PPGGVATFVATAESNASQLSLDGEAELAMQHAYERSLLQKFDDARYKAFQ RRMETEDRIPCSESSPYSDSSRSAYMKRRRRRRSVEPSIKQLVLAADQFI ISRGGGRSVVAGFHWFTDWARDTMISLPGLTIVTGRYDVARSILQTFSKY VSLGMLPNRFPDDGSAPTETDYDNADGTLWYFEAIRAYYMASGDLELLLE LFPILQDIVRHHCNGTRFGIVQDKDGLLHAGSPGLALTWMDAKTDVVYTQ RDGKAVELAALWYNALNCMAFFASELEKEDDSDVFTGMADITEQSFQEKF WNAELGYCYDVIEGGEDRTNMDCSLRPNQLIAASLNWSPLTEEQRFLVLG ACSTHLLTSHAVRTLSPKEKKYQGVYLGDVFARDNAYHQGIGWAWLLGPF VLSHLRVFGNRELAREFLLPVLRSHLNDAGVGQVSELFDGDAPHRARGCI AQAWSVAELLRAWMATEPEDFFEDE* back to topmRNA from alignment at tig00000056_pilon:329338..332000- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra6742.t1 ID=Ggra6742.t1|Name=Ggra6742.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2663bp|location=Sequence derived from alignment at tig00000056_pilon:329338..332000- (Gracilaria gracilis GNS1m male) ATGCTGAACTGTGATTTACCTACAGATGTTGTTTATGTCGGCCGCGAAGT
TTGCGGGGAGTTACCTATGGCAGAGGCTCGAGAGGTACTTGTTACGAACG
GAATAGGAGGTTATGGGTCGATGACGCTGGCGGGGTCTCTCAGTCGTTCA
TATCACGGGCTTCTAGTAGCGGCACTTCGACCACCCTTGGATCGAACACT
CCTGCTGTCCAAGCTTTGCGAGACTGTCTTCTATCATGGCAAAGATTACC
ACCTCTCCACAGATCGCCGAAAGAAGAACGTACTGAAGCGACAAGCTGTA
ATTGCGCGATCTCCTAGTGGTCACAGAAGTACACCTTCAAGCAACGGAGG
TGTAACACGGGCTGATCGATTCGATTCAGTTCCACCCGTTTGGCGCAATG
ACGGTATATCCACAACTCTTTCAAAGCTCCGCGATGATGAAGTAGTGACG
CCAGCAGGTTTCGAGCTCATGGACTCATTTCGCTTGGAGGGTACGGTGCC
AGTCTTTTCATATTCCCTTGGAGACGCCGTGTTAGAAAAGCGCATATGGA
TGAAGCATGGTCAAAATACGGTATACGTTACTTATTATCTTCGTCGTGCT
ACAGAAGCGATTGAGCTCCGAATGCAAGCTTTAGTCAATCACCGGAACCA
TCATGACAGAACCTCTGGCTTGAGACCCAATTTTAACTACTCTGCAAATG
TCGGTAGAAATGGGTCAACGGTATCTGTGCTGTTTACCACTCGTGAGCAT
CACGAAACTACGCTCACTATGATGGTTAGCCGGGGTACGGCGGACCTAAC
CAATGAGTGGATGCGCGGGTTTGTTCTTTCCGAAGAGCGTATGCGAGGAC
TTCCGCATGTTGATGACAACTTGCACGCGGCGACCTTCATAGTTGAACTG
CCACCAGGAGGAGTAGCGACTTTTGTAGCGACAGCTGAGAGTAATGCTTC
ACAACTGAGTTTGGATGGAGAGGCGGAACTGGCGATGCAACACGCTTACG
AAAGATCACTTTTGCAGAAGTTCGACGACGCGCGATACAAGGCGTTCCAA
AGAAGAATGGAAACAGAGGATAGAATTCCATGTTCGGAGTCATCTCCGTA
CTCTGATTCTTCTCGTTCGGCTTATATGAAGCGAAGGCGAAGACGAAGAA
GTGTTGAACCTAGCATCAAACAACTCGTGCTTGCCGCGGATCAGTTCATC
ATCTCAAGAGGAGGAGGAAGGTCTGTTGTAGCCGGGTTTCATTGGTTCAC
AGACTGGGCCAGGGATGTGCGTATTATTCGTCGTAAACATGACTTGCGAT
TCATATTTCGGAGCAAACTGCAGTTTTCTGACGCACTATTGTTATTCTTG
TTTATGTCTCTATCGTTTCAACAATGAAGACAATGATATCTCTGCCAGGG
TTAACGATTGTGACCGGGCGATATGACGTTGCACGTTCGATTCTACAAAC
TTTCTCAAAGTACGGTAAGTTTATCGCTCAAACTCCGATGATTTCCAAAA
CCCGGCATGTTGGGTAGATATGACGAAATCCGAGACGGTTCGGACTTCTA
ACTCCAAGAAATTGATGCAATGCTTGTATCGCGATTTATATTGAAGTGAG
CCTGGGTATGTTACCGAACAGATTTCCAGATGACGGTTCAGCCCCAACGG
AAACCGATTATGATAACGCAGATGGAACGGTACGGTCTTCCTTCCACATC
TCTTGCGAGAAAAAATGCTTCCCATGGTAGCAGAATGTTCTAACACCAAT
ACACTTTGTGACTACACAGCTATGGTATTTTGAGGCAATCCGCGCTTACT
ACATGGCATCCGGAGATTTGGAGCTTCTGTTGGAGCTGTTCCCCATCCTT
CAAGACATTGTTCGTCATCACTGCAATGGAACAAGATTTGGAATTGTACA
AGATAAAGACGGATTACTCCATGCAGGATCACCGGGTTTAGCTCTGACCT
GGATGGACGCGAAAACCGATGTTGTGTACACTCAAAGAGATGGCAAGGCT
GTTGAGCTGGCCGCTCTGTGGTACAATGCTCTGAATTGCATGGCCTTTTT
CGCAAGCGAGCTTGAAAAGGAAGACGATAGCGATGTTTTCACTGGTATGG
CCGACATTACCGAACAATCATTTCAGGAGAAGTTTTGGAATGCTGAGCTG
GGATATTGTTATGATGTTATCGAAGGTGGTGAAGATCGAACAAACATGGA
TTGCTCACTTCGACCCAATCAGCTTATTGCAGCTTCTCTAAACTGGAGTC
CATTGACCGAAGAGCAACGATTCTTAGTGCTGGGTGCGTGTTCTACTCAC
TTACTAACGTCACACGCGGTAAGAACGCTTTCACCGAAAGAAAAAAAGTA
CCAAGGTGTTTATCTCGGTGACGTATTTGCCAGAGATAACGCTTACCATC
AGGGAATCGGATGGGCATGGCTGCTCGGTCCCTTTGTTCTTTCACATTTA
AGGGTGTTTGGTAACCGCGAATTGGCGAGAGAATTCCTTCTACCTGTATT
AAGATCACACCTTAATGACGCTGGCGTGGGCCAAGTTAGCGAGCTTTTCG
ATGGTGATGCTCCGCACAGGGCGCGTGGGTGTATTGCACAGGCATGGTCG
GTTGCGGAACTGTTGAGAGCATGGATGGCAACCGAACCGGAAGACTTTTT
CGAGGACGAGTAG back to topCoding sequence (CDS) from alignment at tig00000056_pilon:329338..332000- >Ggra6742.t1 ID=Ggra6742.t1|Name=Ggra6742.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2328bp|location=Sequence derived from alignment at tig00000056_pilon:329338..332000- (Gracilaria gracilis GNS1m male) ATGCTGAACTGTGATTTACCTACAGATGTTGTTTATGTCGGCCGCGAAGT TTGCGGGGAGTTACCTATGGCAGAGGCTCGAGAGGTACTTGTTACGAACG GAATAGGAGGTTATGGGTCGATGACGCTGGCGGGGTCTCTCAGTCGTTCA TATCACGGGCTTCTAGTAGCGGCACTTCGACCACCCTTGGATCGAACACT CCTGCTGTCCAAGCTTTGCGAGACTGTCTTCTATCATGGCAAAGATTACC ACCTCTCCACAGATCGCCGAAAGAAGAACGTACTGAAGCGACAAGCTGTA ATTGCGCGATCTCCTAGTGGTCACAGAAGTACACCTTCAAGCAACGGAGG TGTAACACGGGCTGATCGATTCGATTCAGTTCCACCCGTTTGGCGCAATG ACGGTATATCCACAACTCTTTCAAAGCTCCGCGATGATGAAGTAGTGACG CCAGCAGGTTTCGAGCTCATGGACTCATTTCGCTTGGAGGGTACGGTGCC AGTCTTTTCATATTCCCTTGGAGACGCCGTGTTAGAAAAGCGCATATGGA TGAAGCATGGTCAAAATACGGTATACGTTACTTATTATCTTCGTCGTGCT ACAGAAGCGATTGAGCTCCGAATGCAAGCTTTAGTCAATCACCGGAACCA TCATGACAGAACCTCTGGCTTGAGACCCAATTTTAACTACTCTGCAAATG TCGGTAGAAATGGGTCAACGGTATCTGTGCTGTTTACCACTCGTGAGCAT CACGAAACTACGCTCACTATGATGGTTAGCCGGGGTACGGCGGACCTAAC CAATGAGTGGATGCGCGGGTTTGTTCTTTCCGAAGAGCGTATGCGAGGAC TTCCGCATGTTGATGACAACTTGCACGCGGCGACCTTCATAGTTGAACTG CCACCAGGAGGAGTAGCGACTTTTGTAGCGACAGCTGAGAGTAATGCTTC ACAACTGAGTTTGGATGGAGAGGCGGAACTGGCGATGCAACACGCTTACG AAAGATCACTTTTGCAGAAGTTCGACGACGCGCGATACAAGGCGTTCCAA AGAAGAATGGAAACAGAGGATAGAATTCCATGTTCGGAGTCATCTCCGTA CTCTGATTCTTCTCGTTCGGCTTATATGAAGCGAAGGCGAAGACGAAGAA GTGTTGAACCTAGCATCAAACAACTCGTGCTTGCCGCGGATCAGTTCATC ATCTCAAGAGGAGGAGGAAGGTCTGTTGTAGCCGGGTTTCATTGGTTCAC AGACTGGGCCAGGGATACAATGATATCTCTGCCAGGGTTAACGATTGTGA CCGGGCGATATGACGTTGCACGTTCGATTCTACAAACTTTCTCAAAGTAC GTGAGCCTGGGTATGTTACCGAACAGATTTCCAGATGACGGTTCAGCCCC AACGGAAACCGATTATGATAACGCAGATGGAACGCTATGGTATTTTGAGG CAATCCGCGCTTACTACATGGCATCCGGAGATTTGGAGCTTCTGTTGGAG CTGTTCCCCATCCTTCAAGACATTGTTCGTCATCACTGCAATGGAACAAG ATTTGGAATTGTACAAGATAAAGACGGATTACTCCATGCAGGATCACCGG GTTTAGCTCTGACCTGGATGGACGCGAAAACCGATGTTGTGTACACTCAA AGAGATGGCAAGGCTGTTGAGCTGGCCGCTCTGTGGTACAATGCTCTGAA TTGCATGGCCTTTTTCGCAAGCGAGCTTGAAAAGGAAGACGATAGCGATG TTTTCACTGGTATGGCCGACATTACCGAACAATCATTTCAGGAGAAGTTT TGGAATGCTGAGCTGGGATATTGTTATGATGTTATCGAAGGTGGTGAAGA TCGAACAAACATGGATTGCTCACTTCGACCCAATCAGCTTATTGCAGCTT CTCTAAACTGGAGTCCATTGACCGAAGAGCAACGATTCTTAGTGCTGGGT GCGTGTTCTACTCACTTACTAACGTCACACGCGGTAAGAACGCTTTCACC GAAAGAAAAAAAGTACCAAGGTGTTTATCTCGGTGACGTATTTGCCAGAG ATAACGCTTACCATCAGGGAATCGGATGGGCATGGCTGCTCGGTCCCTTT GTTCTTTCACATTTAAGGGTGTTTGGTAACCGCGAATTGGCGAGAGAATT CCTTCTACCTGTATTAAGATCACACCTTAATGACGCTGGCGTGGGCCAAG TTAGCGAGCTTTTCGATGGTGATGCTCCGCACAGGGCGCGTGGGTGTATT GCACAGGCATGGTCGGTTGCGGAACTGTTGAGAGCATGGATGGCAACCGA ACCGGAAGACTTTTTCGAGGACGAGTAG back to top
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