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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 45157.CMO270CT |
| PFAMs | DNA_pol_A,DNA_pol_A_exo1 |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC02795 |
| KEGG ko | ko:K02335 |
| KEGG Reaction | R00375,R00376,R00377,R00378 |
| KEGG Pathway | ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 |
| GOs | GO:0000002,GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006264,GO:0006725,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009507,GO:0009536,GO:0009657,GO:0009987,GO:0016043,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0032042,GO:0033258,GO:0033259,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0071897,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576 |
| Evalue | 5.48e-214 |
| EggNOG OGs | COG0749@1|root,KOG0950@2759|Eukaryota |
| EC | 2.7.7.7 |
| Description | plastid DNA replication |
| COG category | L |
| BRITE | ko00000,ko00001,ko01000,ko03032,ko03400 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra6715.t1.stop1 | Ggra6715.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000056_pilon 274740..274742 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra6715.t1.start1 | Ggra6715.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000056_pilon 277095..277097 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra6715.t1 ID=Ggra6715.t1|Name=Ggra6715.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=786bp MPGLALPLRLGTRLPSRRLTHAQSAATLPISPPRYTPYVTPHAPPPPEHV TVVQDLRTAARVVSKLFALPHDTFVAWDTETTGVDPSKQTPVGNGRVLCA TAYAGHHVDFGTGPRLFVDCMKPGVLHALRPYFESENTPKVWHNYSFDRH VLGNHGITPRGFAGDTMHMARLVDSSLQKYSLEHLCKHFLESDMRKVSMS ERFGLLDGKKAALNTLSIHDSPEMRDEWIDYASMDAELTHRLCHRLKNEL QNMDIHGSNSVPEIVERYNSLYELYTSLLVPFGELLTDMESMGFKVDTDW LKEAAVHARGEQLAYEDRFRSWAQKHSPDAKYMNVHSDLQKQQLFFAPCT NKFDKKESMPRRKSFNLELTGELRERYLKELQQSESERGQELFKIYTEPN TKKKVKCDVVLHGLGKKPDEYTAKGWPSVSAKAMKKLAKKMSKKDVSDNN ELVEAIEDLTNATSVSSLMSSFILPLQQWPGKDGRIHASLNLNTETGRLS SRRPNLQNQPALEKDRYKIRKAFVPENGKSLIVADYGQLELRLLAHITNC KSMIEAFEAGGDFHSRTALTMFDNVKAAVARGDCILEREEGDENSSDIPL LKDMFPTERRKAKTLNFSIAYGKTIVGLARDWNTTEEEAAETLNLWYKER QEVRTWQRQCKKFLQQHHFVETMLGRRRRLPDIVSVKPHERFHAQRAAIN APLQGSAADLVMGAMLKLHRDRILRALGWKIILQVHDEIILEGPEESADI ALPIVVKKMRNPLDINLRVELTVDAKCAKSWYEAK* back to topspliced messenger RNA >Ggra6715.t1 ID=Ggra6715.t1|Name=Ggra6715.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2358bp|location=Sequence derived from alignment at tig00000056_pilon:274740..277097- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCCCGGTCTTGCTCTCCCGCTGCGCCTTGGAACTCGTCTGCCTTCTCG CCGTCTCACGCACGCGCAGTCGGCCGCTACGCTCCCTATATCTCCGCCGC GATATACGCCGTACGTCACACCACACGCACCACCACCACCAGAGCATGTA ACTGTTGTGCAGGATCTGCGGACAGCGGCTAGAGTTGTCTCTAAACTCTT CGCGCTCCCGCATGATACCTTTGTAGCGTGGGATACTGAAACTACGGGAG TTGACCCCTCGAAGCAGACCCCTGTTGGCAATGGGCGTGTTCTGTGTGCC ACGGCGTATGCAGGTCATCATGTTGATTTTGGAACGGGGCCAAGACTGTT TGTTGATTGTATGAAACCAGGAGTGCTCCATGCGCTGCGTCCTTATTTTG AAAGTGAGAACACACCGAAAGTGTGGCATAATTACTCTTTCGACAGACAC GTTTTGGGTAATCATGGAATTACTCCTCGTGGCTTTGCTGGCGATACCAT GCACATGGCCAGACTTGTTGACTCTTCACTTCAAAAGTACTCATTGGAGC ACCTGTGCAAGCATTTCCTGGAATCTGATATGCGGAAGGTCAGCATGTCC GAACGTTTTGGCTTGCTTGATGGCAAGAAAGCTGCACTGAACACTCTCAG CATACATGACAGTCCGGAAATGAGAGATGAATGGATCGACTATGCGTCGA TGGACGCAGAGCTCACGCACCGCTTGTGTCATCGACTGAAGAACGAGCTG CAGAACATGGATATTCATGGCAGCAATAGCGTCCCGGAAATCGTGGAACG GTATAACAGTCTTTATGAATTGTATACTAGCTTGCTTGTTCCATTTGGCG AGCTTCTTACAGATATGGAAAGTATGGGGTTCAAAGTTGACACTGACTGG TTGAAAGAGGCCGCAGTTCATGCGCGGGGTGAACAGCTGGCGTATGAAGA CAGGTTTAGAAGCTGGGCACAAAAGCATTCCCCAGATGCGAAGTACATGA ATGTTCATTCTGACCTTCAGAAGCAACAGCTCTTCTTTGCCCCATGCACG AACAAATTTGACAAGAAAGAAAGCATGCCGCGTCGGAAGTCGTTCAATCT GGAATTGACGGGGGAACTGAGAGAAAGGTACCTAAAAGAACTGCAGCAAA GCGAGTCTGAGAGGGGACAAGAGCTGTTCAAGATCTATACAGAACCAAAC ACAAAGAAGAAAGTGAAGTGTGATGTTGTATTGCATGGCTTGGGGAAGAA GCCGGATGAATATACTGCTAAGGGATGGCCAAGCGTTTCTGCAAAGGCAA TGAAGAAGTTGGCAAAGAAGATGTCCAAGAAAGATGTTAGCGATAATAAC GAGCTCGTCGAAGCCATTGAAGACCTGACCAATGCCACTTCAGTTTCAAG CCTAATGTCAAGTTTTATACTCCCACTTCAACAGTGGCCCGGGAAAGATG GGCGAATCCACGCGTCTCTGAACTTGAATACCGAGACAGGGCGACTTTCC TCACGGCGACCGAATTTGCAGAACCAGCCTGCGTTAGAAAAGGATCGGTA CAAAATTCGCAAAGCCTTTGTCCCCGAAAACGGAAAATCTCTTATTGTGG CCGATTATGGTCAACTAGAGTTACGTTTGCTAGCTCATATCACTAACTGC AAGTCCATGATTGAAGCGTTCGAAGCTGGTGGAGACTTTCATTCTCGAAC TGCGTTGACCATGTTCGACAACGTAAAGGCGGCAGTCGCACGCGGGGATT GTATCCTCGAACGAGAAGAAGGTGATGAGAACAGCAGTGATATACCTCTG CTAAAGGATATGTTTCCCACTGAAAGAAGAAAAGCAAAGACATTGAACTT TTCAATTGCGTATGGAAAGACAATTGTTGGCCTTGCGAGGGATTGGAATA CAACTGAAGAGGAAGCAGCGGAAACACTGAACTTATGGTACAAAGAGCGT CAGGAGGTACGAACGTGGCAGCGGCAGTGTAAGAAATTTCTCCAGCAACA CCACTTTGTCGAAACAATGCTTGGCAGGAGGAGACGTCTACCAGACATAG TGTCCGTAAAACCACATGAGCGATTCCACGCGCAACGAGCTGCAATTAAT GCCCCGCTGCAGGGGTCTGCGGCGGATCTGGTTATGGGTGCGATGCTTAA ACTGCATCGAGATCGAATTCTAAGAGCTTTGGGTTGGAAGATAATTCTTC AAGTTCATGACGAAATTATTCTTGAAGGTCCGGAAGAATCAGCTGACATC GCTCTGCCAATCGTAGTTAAGAAAATGAGGAACCCTTTGGATATTAATCT TCGAGTTGAGTTGACTGTGGATGCAAAATGTGCAAAGTCTTGGTACGAAG CAAAATGA back to topprotein sequence of Ggra6715.t1 >Ggra6715.t1 ID=Ggra6715.t1|Name=Ggra6715.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=786bp
MPGLALPLRLGTRLPSRRLTHAQSAATLPISPPRYTPYVTPHAPPPPEHV TVVQDLRTAARVVSKLFALPHDTFVAWDTETTGVDPSKQTPVGNGRVLCA TAYAGHHVDFGTGPRLFVDCMKPGVLHALRPYFESENTPKVWHNYSFDRH VLGNHGITPRGFAGDTMHMARLVDSSLQKYSLEHLCKHFLESDMRKVSMS ERFGLLDGKKAALNTLSIHDSPEMRDEWIDYASMDAELTHRLCHRLKNEL QNMDIHGSNSVPEIVERYNSLYELYTSLLVPFGELLTDMESMGFKVDTDW LKEAAVHARGEQLAYEDRFRSWAQKHSPDAKYMNVHSDLQKQQLFFAPCT NKFDKKESMPRRKSFNLELTGELRERYLKELQQSESERGQELFKIYTEPN TKKKVKCDVVLHGLGKKPDEYTAKGWPSVSAKAMKKLAKKMSKKDVSDNN ELVEAIEDLTNATSVSSLMSSFILPLQQWPGKDGRIHASLNLNTETGRLS SRRPNLQNQPALEKDRYKIRKAFVPENGKSLIVADYGQLELRLLAHITNC KSMIEAFEAGGDFHSRTALTMFDNVKAAVARGDCILEREEGDENSSDIPL LKDMFPTERRKAKTLNFSIAYGKTIVGLARDWNTTEEEAAETLNLWYKER QEVRTWQRQCKKFLQQHHFVETMLGRRRRLPDIVSVKPHERFHAQRAAIN APLQGSAADLVMGAMLKLHRDRILRALGWKIILQVHDEIILEGPEESADI ALPIVVKKMRNPLDINLRVELTVDAKCAKSWYEAK* back to topmRNA from alignment at tig00000056_pilon:274740..277097- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra6715.t1 ID=Ggra6715.t1|Name=Ggra6715.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2358bp|location=Sequence derived from alignment at tig00000056_pilon:274740..277097- (Gracilaria gracilis GNS1m male) ATGCCCGGTCTTGCTCTCCCGCTGCGCCTTGGAACTCGTCTGCCTTCTCG
CCGTCTCACGCACGCGCAGTCGGCCGCTACGCTCCCTATATCTCCGCCGC
GATATACGCCGTACGTCACACCACACGCACCACCACCACCAGAGCATGTA
ACTGTTGTGCAGGATCTGCGGACAGCGGCTAGAGTTGTCTCTAAACTCTT
CGCGCTCCCGCATGATACCTTTGTAGCGTGGGATACTGAAACTACGGGAG
TTGACCCCTCGAAGCAGACCCCTGTTGGCAATGGGCGTGTTCTGTGTGCC
ACGGCGTATGCAGGTCATCATGTTGATTTTGGAACGGGGCCAAGACTGTT
TGTTGATTGTATGAAACCAGGAGTGCTCCATGCGCTGCGTCCTTATTTTG
AAAGTGAGAACACACCGAAAGTGTGGCATAATTACTCTTTCGACAGACAC
GTTTTGGGTAATCATGGAATTACTCCTCGTGGCTTTGCTGGCGATACCAT
GCACATGGCCAGACTTGTTGACTCTTCACTTCAAAAGTACTCATTGGAGC
ACCTGTGCAAGCATTTCCTGGAATCTGATATGCGGAAGGTCAGCATGTCC
GAACGTTTTGGCTTGCTTGATGGCAAGAAAGCTGCACTGAACACTCTCAG
CATACATGACAGTCCGGAAATGAGAGATGAATGGATCGACTATGCGTCGA
TGGACGCAGAGCTCACGCACCGCTTGTGTCATCGACTGAAGAACGAGCTG
CAGAACATGGATATTCATGGCAGCAATAGCGTCCCGGAAATCGTGGAACG
GTATAACAGTCTTTATGAATTGTATACTAGCTTGCTTGTTCCATTTGGCG
AGCTTCTTACAGATATGGAAAGTATGGGGTTCAAAGTTGACACTGACTGG
TTGAAAGAGGCCGCAGTTCATGCGCGGGGTGAACAGCTGGCGTATGAAGA
CAGGTTTAGAAGCTGGGCACAAAAGCATTCCCCAGATGCGAAGTACATGA
ATGTTCATTCTGACCTTCAGAAGCAACAGCTCTTCTTTGCCCCATGCACG
AACAAATTTGACAAGAAAGAAAGCATGCCGCGTCGGAAGTCGTTCAATCT
GGAATTGACGGGGGAACTGAGAGAAAGGTACCTAAAAGAACTGCAGCAAA
GCGAGTCTGAGAGGGGACAAGAGCTGTTCAAGATCTATACAGAACCAAAC
ACAAAGAAGAAAGTGAAGTGTGATGTTGTATTGCATGGCTTGGGGAAGAA
GCCGGATGAATATACTGCTAAGGGATGGCCAAGCGTTTCTGCAAAGGCAA
TGAAGAAGTTGGCAAAGAAGATGTCCAAGAAAGATGTTAGCGATAATAAC
GAGCTCGTCGAAGCCATTGAAGACCTGACCAATGCCACTTCAGTTTCAAG
CCTAATGTCAAGTTTTATACTCCCACTTCAACAGTGGCCCGGGAAAGATG
GGCGAATCCACGCGTCTCTGAACTTGAATACCGAGACAGGGCGACTTTCC
TCACGGCGACCGAATTTGCAGAACCAGCCTGCGTTAGAAAAGGATCGGTA
CAAAATTCGCAAAGCCTTTGTCCCCGAAAACGGAAAATCTCTTATTGTGG
CCGATTATGGTCAACTAGAGTTACGTTTGCTAGCTCATATCACTAACTGC
AAGTCCATGATTGAAGCGTTCGAAGCTGGTGGAGACTTTCATTCTCGAAC
TGCGTTGACCATGTTCGACAACGTAAAGGCGGCAGTCGCACGCGGGGATT
GTATCCTCGAACGAGAAGAAGGTGATGAGAACAGCAGTGATATACCTCTG
CTAAAGGATATGTTTCCCACTGAAAGAAGAAAAGCAAAGACATTGAACTT
TTCAATTGCGTATGGAAAGACAATTGTTGGCCTTGCGAGGGATTGGAATA
CAACTGAAGAGGAAGCAGCGGAAACACTGAACTTATGGTACAAAGAGCGT
CAGGAGGTACGAACGTGGCAGCGGCAGTGTAAGAAATTTCTCCAGCAACA
CCACTTTGTCGAAACAATGCTTGGCAGGAGGAGACGTCTACCAGACATAG
TGTCCGTAAAACCACATGAGCGATTCCACGCGCAACGAGCTGCAATTAAT
GCCCCGCTGCAGGGGTCTGCGGCGGATCTGGTTATGGGTGCGATGCTTAA
ACTGCATCGAGATCGAATTCTAAGAGCTTTGGGTTGGAAGATAATTCTTC
AAGTTCATGACGAAATTATTCTTGAAGGTCCGGAAGAATCAGCTGACATC
GCTCTGCCAATCGTAGTTAAGAAAATGAGGAACCCTTTGGATATTAATCT
TCGAGTTGAGTTGACTGTGGATGCAAAATGTGCAAAGTCTTGGTACGAAG
CAAAATGA back to topCoding sequence (CDS) from alignment at tig00000056_pilon:274740..277097- >Ggra6715.t1 ID=Ggra6715.t1|Name=Ggra6715.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2358bp|location=Sequence derived from alignment at tig00000056_pilon:274740..277097- (Gracilaria gracilis GNS1m male) ATGCCCGGTCTTGCTCTCCCGCTGCGCCTTGGAACTCGTCTGCCTTCTCG CCGTCTCACGCACGCGCAGTCGGCCGCTACGCTCCCTATATCTCCGCCGC GATATACGCCGTACGTCACACCACACGCACCACCACCACCAGAGCATGTA ACTGTTGTGCAGGATCTGCGGACAGCGGCTAGAGTTGTCTCTAAACTCTT CGCGCTCCCGCATGATACCTTTGTAGCGTGGGATACTGAAACTACGGGAG TTGACCCCTCGAAGCAGACCCCTGTTGGCAATGGGCGTGTTCTGTGTGCC ACGGCGTATGCAGGTCATCATGTTGATTTTGGAACGGGGCCAAGACTGTT TGTTGATTGTATGAAACCAGGAGTGCTCCATGCGCTGCGTCCTTATTTTG AAAGTGAGAACACACCGAAAGTGTGGCATAATTACTCTTTCGACAGACAC GTTTTGGGTAATCATGGAATTACTCCTCGTGGCTTTGCTGGCGATACCAT GCACATGGCCAGACTTGTTGACTCTTCACTTCAAAAGTACTCATTGGAGC ACCTGTGCAAGCATTTCCTGGAATCTGATATGCGGAAGGTCAGCATGTCC GAACGTTTTGGCTTGCTTGATGGCAAGAAAGCTGCACTGAACACTCTCAG CATACATGACAGTCCGGAAATGAGAGATGAATGGATCGACTATGCGTCGA TGGACGCAGAGCTCACGCACCGCTTGTGTCATCGACTGAAGAACGAGCTG CAGAACATGGATATTCATGGCAGCAATAGCGTCCCGGAAATCGTGGAACG GTATAACAGTCTTTATGAATTGTATACTAGCTTGCTTGTTCCATTTGGCG AGCTTCTTACAGATATGGAAAGTATGGGGTTCAAAGTTGACACTGACTGG TTGAAAGAGGCCGCAGTTCATGCGCGGGGTGAACAGCTGGCGTATGAAGA CAGGTTTAGAAGCTGGGCACAAAAGCATTCCCCAGATGCGAAGTACATGA ATGTTCATTCTGACCTTCAGAAGCAACAGCTCTTCTTTGCCCCATGCACG AACAAATTTGACAAGAAAGAAAGCATGCCGCGTCGGAAGTCGTTCAATCT GGAATTGACGGGGGAACTGAGAGAAAGGTACCTAAAAGAACTGCAGCAAA GCGAGTCTGAGAGGGGACAAGAGCTGTTCAAGATCTATACAGAACCAAAC ACAAAGAAGAAAGTGAAGTGTGATGTTGTATTGCATGGCTTGGGGAAGAA GCCGGATGAATATACTGCTAAGGGATGGCCAAGCGTTTCTGCAAAGGCAA TGAAGAAGTTGGCAAAGAAGATGTCCAAGAAAGATGTTAGCGATAATAAC GAGCTCGTCGAAGCCATTGAAGACCTGACCAATGCCACTTCAGTTTCAAG CCTAATGTCAAGTTTTATACTCCCACTTCAACAGTGGCCCGGGAAAGATG GGCGAATCCACGCGTCTCTGAACTTGAATACCGAGACAGGGCGACTTTCC TCACGGCGACCGAATTTGCAGAACCAGCCTGCGTTAGAAAAGGATCGGTA CAAAATTCGCAAAGCCTTTGTCCCCGAAAACGGAAAATCTCTTATTGTGG CCGATTATGGTCAACTAGAGTTACGTTTGCTAGCTCATATCACTAACTGC AAGTCCATGATTGAAGCGTTCGAAGCTGGTGGAGACTTTCATTCTCGAAC TGCGTTGACCATGTTCGACAACGTAAAGGCGGCAGTCGCACGCGGGGATT GTATCCTCGAACGAGAAGAAGGTGATGAGAACAGCAGTGATATACCTCTG CTAAAGGATATGTTTCCCACTGAAAGAAGAAAAGCAAAGACATTGAACTT TTCAATTGCGTATGGAAAGACAATTGTTGGCCTTGCGAGGGATTGGAATA CAACTGAAGAGGAAGCAGCGGAAACACTGAACTTATGGTACAAAGAGCGT CAGGAGGTACGAACGTGGCAGCGGCAGTGTAAGAAATTTCTCCAGCAACA CCACTTTGTCGAAACAATGCTTGGCAGGAGGAGACGTCTACCAGACATAG TGTCCGTAAAACCACATGAGCGATTCCACGCGCAACGAGCTGCAATTAAT GCCCCGCTGCAGGGGTCTGCGGCGGATCTGGTTATGGGTGCGATGCTTAA ACTGCATCGAGATCGAATTCTAAGAGCTTTGGGTTGGAAGATAATTCTTC AAGTTCATGACGAAATTATTCTTGAAGGTCCGGAAGAATCAGCTGACATC GCTCTGCCAATCGTAGTTAAGAAAATGAGGAACCCTTTGGATATTAATCT TCGAGTTGAGTTGACTGTGGATGCAAAATGTGCAAAGTCTTGGTACGAAG CAAAATGA back to top
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