Ggra6897.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra6897.t1
Unique Name	Ggra6897.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	545

Homology

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BLAST of Ggra6897.t1 vs. uniprot
Match: A0A2V3IRM1 (T-complex protein 1 subunit alpha n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRM1_9FLOR)

HSP 1 Score: 999 bits (2583), Expect = 0.000e+0
Identity = 523/544 (96.14%), Postives = 537/544 (98.71%), Query Frame = 0

Query:    1 MSSLVIKGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPRRVAPAKIACLDVDLRRAKMKMGVSVLIENPEELNKAQEKELDITRDRINAVLKAGANVVLTTKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVAMADLGGEESFDHSLLGYADEVYEERIRDDSILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNEDSKAKLSTFGLDLDAGSLRDNLAEGVVEPAVSKKKIIQFATEAALTIIRIDDMVKIDKKEDDGSVPY 544
            MSSLVIKGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKL RETLINAA+TSLSSKILGSAES+KFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPRRVAPAKIACLDVDLRR KMKMGVSVLIENPEELNKAQEKELDITRDRI+AVLKAGANVVLTTKGIDDAALKYFVEAGAIAVRRVSERD+ERIAKATGATVQV+MADLGGEESFD+SLLGYADEVYEERIRDD ILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVV GGGA EAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQN+DSK+KLS+FGLDLD G+LRDNLAEGV+EP +SKKKIIQFATEAALTIIRIDD++KIDKKEDDGSVPY
Sbjct:    1 MSSLVIKGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLGRETLINAARTSLSSKILGSAESVKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPRRVAPAKIACLDVDLRRTKMKMGVSVLIENPEELNKAQEKELDITRDRISAVLKAGANVVLTTKGIDDAALKYFVEAGAIAVRRVSERDIERIAKATGATVQVSMADLGGEESFDNSLLGYADEVYEERIRDDDILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVVGGGAAEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNDDSKSKLSSFGLDLDVGALRDNLAEGVIEPTISKKKIIQFATEAALTIIRIDDLIKIDKKEDDGSVPY 544

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BLAST of Ggra6897.t1 vs. uniprot
Match: R7QQU1 (T-complex protein 1 subunit alpha n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQU1_CHOCR)

HSP 1 Score: 923 bits (2386), Expect = 0.000e+0
Identity = 479/544 (88.05%), Postives = 514/544 (94.49%), Query Frame = 0

Query:    1 MSSLVIKGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPRRVAPAKIACLDVDLRRAKMKMGVSVLIENPEELNKAQEKELDITRDRINAVLKAGANVVLTTKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVAMADLGGEESFDHSLLGYADEVYEERIRDDSILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNEDSKAKLSTFGLDLDAGSLRDNLAEGVVEPAVSKKKIIQFATEAALTIIRIDDMVKIDKKEDDGSVPY 544
            MS LVI GQRESGQDVRTGNVTACVAV+NIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRR NELVRSRIHPTNI+ GYR AMREGCKYL+D LA PVDKL +E L+NAAKTSLSSKILGSAES  FA MAVDAV+AVKTPT+ GKYKYPI+AIHVLKAQGKSA+ESELLPGYALN  RSSQLMP+R+APA+IACLD+DLRRAKMKMGVS+LIE+PEELNKAQEKELDITRDRINAVLKAGANV+LTTKGIDDAALKYFVEAGAIAVRRVSERD+ RIAKATGATV+VAMADL GEE+FD SLLG A+E+YEERIRDD++LI+K CKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESN VVAGGGAVEAALSIHLENFA M+GSREQLAIA+FAEALLVIPKTLA+NAA DSTDLVAKLKAVHHAAQN+DSKA  STFGLDL AG+LRDNLA+GV+EPA+SKKKIIQFATEAALTIIRIDD++ I K E+DGS PY
Sbjct:    1 MSGLVIDGQRESGQDVRTGNVTACVAVSNIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRGNELVRSRIHPTNIVAGYRWAMREGCKYLKDNLATPVDKLGKECLVNAAKTSLSSKILGSAESEMFANMAVDAVLAVKTPTTGGKYKYPIDAIHVLKAQGKSARESELLPGYALNKARSSQLMPQRIAPARIACLDIDLRRAKMKMGVSILIEDPEELNKAQEKELDITRDRINAVLKAGANVILTTKGIDDAALKYFVEAGAIAVRRVSERDINRIAKATGATVEVAMADLSGEETFDPSLLGSAEEIYEERIRDDNVLILKKCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNYVVAGGGAVEAALSIHLENFAKMLGSREQLAIAQFAEALLVIPKTLAINAAKDSTDLVAKLKAVHHAAQNDDSKANFSTFGLDLQAGTLRDNLAKGVIEPAMSKKKIIQFATEAALTIIRIDDLITIRKNENDGSSPY 544

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BLAST of Ggra6897.t1 vs. uniprot
Match: A0A1X6NV05 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NV05_PORUM)

HSP 1 Score: 744 bits (1922), Expect = 6.940e-266
Identity = 388/543 (71.45%), Postives = 461/543 (84.90%), Query Frame = 0

Query:    1 MSSLVIKGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGK----YKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPRRVAPAKIACLDVDLRRAKMKMGVSVLIENPEELNKAQEKELDITRDRINAVLKAGANVVLTTKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVAMADLGGEESFDHSLLGYADEVYEERIRDDSILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNEDSKAKLSTFGLDLDAGSLRDNLAEGVVEPAVSKKKIIQFATEAALTIIRIDDMVKIDKKEDD 539
            MSSL I G RESGQDVRT NVTACVAVANI++SSLGP GLDKMLVDEVGDVTVTNDGATI+ LLEVEHPAA+VLTELA QQD+EVGDGTTSVVILAAELL+RAN+LV +RIHPTNII GYRLAMRE CKY+RDK+A PV+KL RE L+NAA+TSLSSKILGSAES  FA +AVDAV++VKT    GK      YPI+++HVLK QG+SA+ESELLPG A+N  R+++ MP RVAPA++ACLDVDLRR KMKMG+ V I++   LN AQEKELDITRDR+ A+L +GANV+LTTKGIDDAALKYFVEAGAIA+RRV   D++R+AKATGA VQ ++ADL G ES D S LG A+E  E RIRDD++ +++ C+STAACSVLLRGPNEYMCDEM RSFHDA+CVVKRT+ES +VV GGGAVEAALS++L+NFATM+GSREQLAIA+FA++LL IPKTLA+NAA D+TDLVA+L+A H+ AQ E+ KA L+  GLDL  G +R++   GVVEPA+SK K IQFA EAA+TI+RIDD V + +K+ D
Sbjct:    1 MSSLAISGTRESGQDVRTANVTACVAVANILRSSLGPQGLDKMLVDEVGDVTVTNDGATIVGLLEVEHPAARVLTELAQQQDQEVGDGTTSVVILAAELLKRANDLVAARIHPTNIIAGYRLAMREACKYIRDKMATPVEKLGRELLVNAARTSLSSKILGSAESTHFANVAVDAVLSVKT--GGGKDGVPASYPIKSVHVLKCQGRSARESELLPGVAINSGRAAKGMPSRVAPARVACLDVDLRRTKMKMGIQVQIDDASALNAAQEKELDITRDRVKAILASGANVILTTKGIDDAALKYFVEAGAIALRRVPLADVKRVAKATGAVVQGSLADLSGAESLDASQLGTAEEAAERRIRDDTVTVLRGCRSTAACSVLLRGPNEYMCDEMGRSFHDAICVVKRTVESGTVVPGGGAVEAALSVYLDNFATMLGSREQLAIAQFADSLLAIPKTLAVNAALDATDLVARLRAAHYVAQTEEGKAGLAHTGLDLSRGVVRNSSRAGVVEPALSKIKSIQFAAEAAITILRIDDSVDVARKDAD 541

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BLAST of Ggra6897.t1 vs. uniprot
Match: A0A1X6P646 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P646_PORUM)

HSP 1 Score: 732 bits (1890), Expect = 5.080e-261
Identity = 380/541 (70.24%), Postives = 453/541 (83.73%), Query Frame = 0

Query:    1 MSSLVIKGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSG--KYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPRRVAPAKIACLDVDLRRAKMKMGVSVLIENPEELNKAQEKELDITRDRINAVLKAGANVVLTTKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVAMADLGGEESFDHSLLGYADEVYEERIRDDSILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNEDSKAKLSTFGLDLDAGSLRDNLAEGVVEPAVSKKKIIQFATEAALTIIRIDDMVKIDKKEDD 539
            M+SL I G RESGQDVRT NVTACVAVANI++SSLGP GLDKMLVDEVGDVTVTNDGATI+ LLEVEHPAA++LTELA QQD+EVGDGTTSVVILAAELL+RAN+LV  +IHPTNII GYRLA+RE CKY+RD +A PV+ L RE L+NAA TSLSSKILGSAES  FA MAVDAV++VKT    G     YPI+A+HVLK QG+SA+ESELLPG ALN  R+++ MP RV+PA++ACLDVDLRR KMKMGV V I++   LN AQEKELDITRDR+ A+L +GANV+LTTKGIDDAALKYFVEAGAIA+RRV   D+ R+AKATGA VQ ++ADL G ES D S LG A+E  E RIRDD++ +++ C+STAACSVLLRGPNEYMCDEM RSFHDAVCVVKRTLES +VV GGGAVEAALS+HL+ +AT +G+RE LA+A+ A+ALLVIPKTLA+NAA D+TDLVA+L+A H+ +QNE  K +L+  GLDL  G +R++   GVVEPA+SK K IQFA EAA+TI+RIDD + +++K+ D
Sbjct:    1 MTSLAISGHRESGQDVRTANVTACVAVANILRSSLGPQGLDKMLVDEVGDVTVTNDGATIVGLLEVEHPAARILTELAQQQDQEVGDGTTSVVILAAELLKRANDLVADKIHPTNIIAGYRLAIREACKYVRDHMATPVEALGRELLVNAAATSLSSKILGSAESNHFANMAVDAVLSVKTGGVKGGPPASYPIKAVHVLKCQGQSARESELLPGVALNCGRAAKGMPSRVSPARVACLDVDLRRTKMKMGVQVQIDDASALNAAQEKELDITRDRVQAILASGANVILTTKGIDDAALKYFVEAGAIALRRVPMEDVRRVAKATGAVVQGSLADLDGNESLDSSQLGAAEEAAEMRIRDDTVTVLRGCQSTAACSVLLRGPNEYMCDEMGRSFHDAVCVVKRTLESGTVVPGGGAVEAALSVHLDQYATTLGTREMLAVAQVADALLVIPKTLAVNAAMDATDLVARLRAAHYMSQNEKGKEELALTGLDLKTGVVRNSSKAGVVEPALSKIKSIQFAAEAAITILRIDDSINVERKDAD 541

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BLAST of Ggra6897.t1 vs. uniprot
Match: M2Y3C0 (T-complex protein 1 subunit alpha n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y3C0_GALSU)

HSP 1 Score: 719 bits (1856), Expect = 7.220e-256
Identity = 368/544 (67.65%), Postives = 454/544 (83.46%), Query Frame = 0

Query:    1 MSSLVIKGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPRRVAPAKIACLDVDLRRAKMKMGVSVLIENPEELNKAQEKELDITRDRINAVLKAGANVVLTTKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVAMADLGGEESFDHSLLGYADEVYEERIRDDSILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNEDSKAKLSTFGLDLDAGSLRDNLAEGVVEPAVSKKKIIQFATEAALTIIRIDDMVKIDKKEDDGSVPY 544
            MSSL I G+R+SG+DVRT N+TAC+A+ANI++SSLGPVGLDKMLVD++GDV VTNDGATIL+ LEVEHPAAKVL ELA QQDEEVGDGTTSVV+LAAELL+RA++LVR  IHPTNII GYRLAMRE C++LRD  A  V+KL +  L+N A+T++SSKI+GS E   FA +AV+AV+AVK  T  GKYKYPI+AI++LK  GK A++S+LL G  LN+TR+SQ MP RV+PAKIACLD DLRR+KMKMGV VL+E+P+EL + QEKE ++T+ RI A+LKAGAN + TTKGIDDAALKYFVE  AIAVRRV++ D++R+AKATGA+VQ+ MADLGGEESFD S LG A+EV EE I DD  + ++ CK+ A+ +++LRGPNEYMCDEMSRS HD +C V+R LESN VV GGG VEA+LSI LENFAT +G REQLAIAEF++ALLVIPKTLA NAA D+TD++AKL+AVH+AAQ + +K  LS  GLDL+ G LRDNL  G++EPA+SK K IQ ATEAA+TI+RIDD++K+ KK++D S  Y
Sbjct:    1 MSSLAIYGERQSGEDVRTQNITACIAIANILRSSLGPVGLDKMLVDDMGDVIVTNDGATILKQLEVEHPAAKVLVELAQQQDEEVGDGTTSVVLLAAELLKRADDLVRRGIHPTNIIAGYRLAMRESCRFLRDTFAVSVEKLGKSCLLNTARTAISSKIIGS-EIDFFANLAVEAVLAVKRKTEVGKYKYPIKAINILKKSGKGARDSQLLKGIGLNVTRASQGMPLRVSPAKIACLDFDLRRSKMKMGVQVLVEDPKELERIQEKEYEVTKSRIEAILKAGANAIFTTKGIDDAALKYFVEKNAIAVRRVAKDDMKRLAKATGASVQLTMADLGGEESFDPSFLGSAEEVVEETISDDKFIFVRGCKNLASGTIVLRGPNEYMCDEMSRSLHDCLCAVQRALESNYVVPGGGCVEASLSIFLENFATTLGGREQLAIAEFSDALLVIPKTLAANAALDATDMIAKLRAVHNAAQLDSNKGNLSHMGLDLENGHLRDNLEAGILEPAMSKIKSIQLATEAAITILRIDDLIKLKKKQEDESGEY 543

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BLAST of Ggra6897.t1 vs. uniprot
Match: A0A3B6SBA3 (T-complex protein 1 subunit alpha n=92 Tax=Poaceae TaxID=4479 RepID=A0A3B6SBA3_WHEAT)

HSP 1 Score: 711 bits (1835), Expect = 1.210e-252
Identity = 364/532 (68.42%), Postives = 448/532 (84.21%), Query Frame = 0

Query:    6 IKGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPRRVAPAKIACLDVDLRRAKMKMGVSVLIENPEELNKAQEKELDITRDRINAVLKAGANVVLTTKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVAMADLGGEESFDHSLLGYADEVYEERIRDDSILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNEDSKAKLSTFGLDLDAGSLRDNLAEGVVEPAVSKKKIIQFATEAALTIIRIDDMVKIDKKE 537
            I G+R+SGQDVRT NV+AC AVANIVKSSLGPVGLDKMLVD++GDVT+TNDGATILR+LEVEHPAAKVL ELA  QD EVGDGTTSVVI+AAELL+RANELVR++IHPT+II+GYRLAMRE CKY+ +KL+  VDKL +++LIN AKTS+SSK++ + ++  FA + V+AV AVKT  S G+ KYPI++I++LKA GKSAKES LL GYALN  R++Q MP RV PA+IACLD +L++ KM+MGV VL+ +P EL K +E+E DIT++RI  VLKAGANVV TTKGIDD +LKYFVEAGAIAVRRV + DL  +AKATGAT+    AD+ GEE+FD S LG+ADEV EERI DD I+++K  K+T+A S++LRG N++M DE+ RS HDA+C+VKRTLESN+VVAGGGAVEAALS++LEN AT +GSREQLAIAEFAE+LL+IPK LA+NAA D+TDLVAKL++ HH AQ    K  LS+ GLDL  G +R+NL  GV+EPA+SK KIIQFATEAA+TI+RIDDM+K+DK+E
Sbjct:   10 IMGERQSGQDVRTQNVSACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRANELVRNKIHPTSIISGYRLAMREACKYVEEKLSVKVDKLGKDSLINCAKTSMSSKLITTDDNF-FANLVVEAVQAVKTTNSKGEVKYPIKSINILKAHGKSAKESYLLNGYALNTGRAAQGMPTRVTPARIACLDFNLQKTKMQMGVQVLVSDPRELEKIRERESDITKERIEKVLKAGANVVFTTKGIDDMSLKYFVEAGAIAVRRVRKEDLRHVAKATGATMVTTFADMEGEETFDPSFLGHADEVVEERISDDEIILVKGTKNTSAVSIILRGANDFMLDEIERSLHDALCIVKRTLESNTVVAGGGAVEAALSVYLENLATTLGSREQLAIAEFAESLLIIPKVLAVNAAKDATDLVAKLRSYHHKAQTNADKQHLSSMGLDLTKGVIRNNLEHGVIEPAMSKVKIIQFATEAAITIVRIDDMIKLDKEE 540

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BLAST of Ggra6897.t1 vs. uniprot
Match: A0A6I9R2Z1 (T-complex protein 1 subunit alpha n=4 Tax=Magnoliopsida TaxID=3398 RepID=A0A6I9R2Z1_ELAGV)

HSP 1 Score: 701 bits (1810), Expect = 7.870e-249
Identity = 362/535 (67.66%), Postives = 447/535 (83.55%), Query Frame = 0

Query:    3 SLVIKGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPRRVAPAKIACLDVDLRRAKMKMGVSVLIENPEELNKAQEKELDITRDRINAVLKAGANVVLTTKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVAMADLGGEESFDHSLLGYADEVYEERIRDDSILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNEDSKAKLSTFGLDLDAGSLRDNLAEGVVEPAVSKKKIIQFATEAALTIIRIDDMVKIDKKE 537
            +L I G+R+SGQDVRT NV AC AVANIVKSSLGPVGLDKMLVD++GDVT+TNDGATIL++LEVEHPAAKVL ELA  QD EVGDGTTSVVI+AAELL+RAN+LVR++IHPT+II+GYRLAMRE CKY+ +KLA  V+KL +++LIN AKTS+SSK++GS +S  FA + VDAV AVKT  + G+ KYPI+ I++LKA GKSAK+S LL GYALN  R++Q MP RVAPA+IACLD +L++ KM+MG+ VL+ +P EL K +++E DIT++RI  + KAGANVVLTTKGIDD +LKYFVEAGAIAVRRV + DL  +AKATGATV    AD+ GEE+FD S LGYADEV EERI DD ++++K  K+T+A S++LRG N++M DEM RS HDA+ +VKRTLESN VVAGGGAVEAALS++LE  AT +GSREQLAIAEFAE+LL+IPK LA+NAA D+T+LVAKL+A HH AQ +  K  LS+ GLDL  G++R+NL  GV+EPA+SK KIIQFATEAA+TI+RIDDM+K+ K E
Sbjct:    7 TLDILGERQSGQDVRTQNVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVEEKLAVKVEKLGKDSLINCAKTSMSSKLIGS-DSDFFANLVVDAVQAVKTTNARGEVKYPIKGINILKAHGKSAKDSYLLNGYALNTGRAAQGMPTRVAPARIACLDFNLQKTKMQMGIQVLVTDPRELEKIRQREADITKERIEKIRKAGANVVLTTKGIDDMSLKYFVEAGAIAVRRVRKEDLRHVAKATGATVVSTFADMEGEETFDSSFLGYADEVVEERIADDDVILVKGTKNTSAVSLILRGANDFMLDEMDRSLHDALSIVKRTLESNMVVAGGGAVEAALSVYLEYLATTLGSREQLAIAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKQHLSSMGLDLSKGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDE 540

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BLAST of Ggra6897.t1 vs. uniprot
Match: A0A0K9PUT7 (T-complex protein 1 subunit alpha n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PUT7_ZOSMR)

HSP 1 Score: 701 bits (1808), Expect = 1.470e-248
Identity = 360/535 (67.29%), Postives = 450/535 (84.11%), Query Frame = 0

Query:    6 IKGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPRRVAPAKIACLDVDLRRAKMKMGVSVLIENPEELNKAQEKELDITRDRINAVLKAGANVVLTTKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVAMADLGGEESFDHSLLGYADEVYEERIRDDSILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNEDSKAKLSTFGLDLDAGSLRDNLAEGVVEPAVSKKKIIQFATEAALTIIRIDDMVKIDKKEDDG 540
            I G+R+SGQDVRT NV AC AVANIVKSSLGPVGLDKMLVD++GDVT+TNDGATIL++LEVEHPAAKVL ELA  QD EVGDGTTSVVI+AAELL+RAN LVR++IHPT+II+G+RL+M+E CKY+ DKLA  V+KL +  LIN AKTS+SSK++ S +S  FA +AVDAV ++KT  + G+ KYPI+ I+++KA GKSA++S LL GYALN++R++Q MP +V+PAKIACLD +L++ KM+MGV VL+ +P EL K +++E DIT++RI  +LKAGANV+LTTKGIDD ALKYFVEAGAIAVRRV + DL  +AKATGAT     AD+ GEE+FD S LGYADEV EERI DD I+++K  K+T+A S++LRG N+YM DEM R+ HDA+C+VKRTLESN+VVAGGGAVEAALS++LE+ AT +GSREQLAIAEFAE+LL+IPK LA+NAA D+T+LVA+L+A HHAAQ ++ K  LS+ GLDL  G +RDNL  GV+EPA+SK KIIQFATEAA+TI+RIDDM+K+  KED G
Sbjct:   10 ILGERQSGQDVRTQNVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANGLVRNKIHPTSIISGFRLSMKEACKYVDDKLAIKVEKLGKAPLINCAKTSMSSKLI-SGDSDFFANLAVDAVQSIKTTNTKGEVKYPIKGINIIKAHGKSARDSYLLKGYALNISRAAQGMPLKVSPAKIACLDFNLQKTKMQMGVQVLVTDPRELEKIRQREADITKERIEKILKAGANVILTTKGIDDMALKYFVEAGAIAVRRVKKEDLRHVAKATGATSVSTFADMEGEETFDSSFLGYADEVVEERISDDEIILVKGTKNTSAVSLILRGANDYMLDEMERALHDALCIVKRTLESNTVVAGGGAVEAALSVYLEHLATTLGSREQLAIAEFAESLLIIPKVLAVNAAKDATELVAQLRACHHAAQMKEDKRHLSSMGLDLSKGIIRDNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKL-AKEDQG 542

[Close]

BLAST of Ggra6897.t1 vs. uniprot
Match: A0A0U9HIA8 (T-complex protein 1 subunit alpha n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HIA8_KLENI)

HSP 1 Score: 699 bits (1804), Expect = 5.560e-248
Identity = 359/540 (66.48%), Postives = 449/540 (83.15%), Query Frame = 0

Query:    1 MSSLVIKGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPRRVAPAKIACLDVDLRRAKMKMGVSVLIENPEELNKAQEKELDITRDRINAVLKAGANVVLTTKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVAMADLGGEESFDHSLLGYADEVYEERIRDDSILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNEDSKAKLSTFGLDLDAGSLRDNLAEGVVEPAVSKKKIIQFATEAALTIIRIDDMVKIDKKEDDG 540
            M  L I G R+SGQDVRT N TA  A++N+VKSSLGPVGLDKMLVD++GDVT+TNDGATIL++LEVEHPAAKVL ELA  QD EVGDGTTSVVI+AAELL+RAN+LVR++IHPT+II+GYRLAMRE  KY+ +KLA  VDKL +ETL+NAAKTS+SSKI+G+ ES  FA +AVDAV ++K+    G  +YPI++I++LKA GKSAKES+LL GYA+N TR++Q M + V+PAKIACLD +L++ KM+MG+ VL+ +P EL K +++E D+T++RI  +LKAGANV+LTTKGIDD ALKYFVEAGAIA RRVS+ DL  IAKATGAT  +  AD+ G E+FD S LG A+EV EER+ DD +L++K  K++ A S+LLRG N+YM DEM RS HD++C+VKRTLESN+VVAGGGAVEAALS+HLEN AT +GSREQLAIAEFAEALLVIPKTLA+NAA D+T+LVAKL+A HH AQ    KA LS  GLDL  G +R+N+  GV+EPA+SK K++QFATEAA+TI+RIDDM+K+ K+E++ 
Sbjct:    1 MEGLEISGDRQSGQDVRTQNATAVQAISNVVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAVKYVDEKLAIKVDKLPKETLLNAAKTSMSSKIIGT-ESDYFAKIAVDAVQSIKSTNDRGDVRYPIKSINILKAHGKSAKESQLLKGYAINTTRAAQGMVKSVSPAKIACLDFNLQKTKMQMGIQVLVNDPRELEKIRDRESDVTKERIQKLLKAGANVILTTKGIDDMALKYFVEAGAIAARRVSKEDLRHIAKATGATPMLTFADMEGGETFDASFLGTAEEVAEERVADDELLVIKGPKNSRAVSILLRGANDYMLDEMERSLHDSLCIVKRTLESNTVVAGGGAVEAALSVHLENLATTLGSREQLAIAEFAEALLVIPKTLAVNAAKDATELVAKLRAYHHKAQTSPDKAHLSGTGLDLVNGVVRNNIEAGVIEPALSKTKVLQFATEAAITILRIDDMIKLHKEEEEA 539

[Close]

BLAST of Ggra6897.t1 vs. uniprot
Match: A0A835S053 (T-complex protein 1 subunit alpha n=3 Tax=Petrosaviidae TaxID=1437197 RepID=A0A835S053_VANPL)

HSP 1 Score: 698 bits (1802), Expect = 1.250e-247
Identity = 361/535 (67.48%), Postives = 446/535 (83.36%), Query Frame = 0

Query:    6 IKGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGDVTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELLRRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINAAKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKAQGKSAKESELLPGYALNMTRSSQLMPRRVAPAKIACLDVDLRRAKMKMGVSVLIENPEELNKAQEKELDITRDRINAVLKAGANVVLTTKGIDDAALKYFVEAGAIAVRRVSERDLERIAKATGATVQVAMADLGGEESFDHSLLGYADEVYEERIRDDSILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVKRTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPKTLAMNAAHDSTDLVAKLKAVHHAAQNEDSKAKLSTFGLDLDAGSLRDNLAEGVVEPAVSKKKIIQFATEAALTIIRIDDMVKIDKKEDDG 540
            I G+R+SGQDVRT NV AC AVANIVKSSLGPVGLDKMLVD++GDVT+TNDGATIL++LEVEHPAAKVL ELA  QD EVGDGTTSVVI+AAELL+RAN+LVR++IHPT+II+GYRLAMRE CKY+ +KLA  V+KL +E+LIN AKTS+SSK++G  +S  FA + VDAV AVKT  + G+ KYPI+ I++LKA GKSA++S LL GYALN  R++Q MP RVAPA+IACLD +L++ K++MGV VL+ +P EL K +++E DIT++RI  +LKAGANVVLTTKGIDD +LKYFVEAGAIAVRRV + DL  IAKATGATV    AD+ GEE+FD S LG ADE  EERI DD ++++K  K+++A SV+LRG N++M DEM RS HDA+ +VKRTLESN VVAGGGAVEAALS++LEN AT +GSREQLAIAEFAE+LL+IPK L++NAA D+T+LVAKL+A HHAAQ +  K  LS+ GLDL  GS+R+NL  GV+EP++SK KIIQFATEAA+TI+RIDDM+K+ K E + 
Sbjct:   10 ILGERQSGQDVRTQNVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVDEKLAVKVEKLGKESLINCAKTSMSSKLIG-VDSDFFANLVVDAVQAVKTTNARGEVKYPIKGINILKAHGKSARDSYLLNGYALNTGRAAQGMPSRVAPARIACLDFNLQKTKLQMGVQVLVSDPRELEKIRQRESDITKERIEKLLKAGANVVLTTKGIDDMSLKYFVEAGAIAVRRVRKEDLRHIAKATGATVVTTFADMEGEETFDSSFLGQADEAVEERIADDDVIMVKGTKTSSAVSVILRGANDFMLDEMERSLHDALSIVKRTLESNMVVAGGGAVEAALSVYLENLATTLGSREQLAIAEFAESLLIIPKVLSVNAAKDATELVAKLRAYHHAAQTKADKQHLSSMGLDLSKGSIRNNLEAGVIEPSMSKVKIIQFATEAAITILRIDDMIKLIKDEQEA 543

The following BLAST results are available for this feature:

BLAST of Ggra6897.t1 vs. uniprot

BLAST of Ggra6897.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3IRM1	0.000e+0	96.14	T-complex protein 1 subunit alpha n=1 Tax=Gracilar...	[more]
R7QQU1	0.000e+0	88.05	T-complex protein 1 subunit alpha n=1 Tax=Chondrus...	[more]
A0A1X6NV05	6.940e-266	71.45	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]
A0A1X6P646	5.080e-261	70.24	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]
M2Y3C0	7.220e-256	67.65	T-complex protein 1 subunit alpha n=1 Tax=Galdieri...	[more]
A0A3B6SBA3	1.210e-252	68.42	T-complex protein 1 subunit alpha n=92 Tax=Poaceae...	[more]
A0A6I9R2Z1	7.870e-249	67.66	T-complex protein 1 subunit alpha n=4 Tax=Magnolio...	[more]
A0A0K9PUT7	1.470e-248	67.29	T-complex protein 1 subunit alpha n=1 Tax=Zostera ...	[more]
A0A0U9HIA8	5.560e-248	66.48	T-complex protein 1 subunit alpha n=1 Tax=Klebsorm...	[more]
A0A835S053	1.250e-247	67.48	T-complex protein 1 subunit alpha n=3 Tax=Petrosav...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PRINTS	PR00304	TCOMPLEXTCP1	coord: 408..420 score: 45.13 coord: 81..100 score: 50.67 coord: 51..69 score: 44.18 coord: 374..396 score: 27.18 coord: 29..45 score: 44.47
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PANTHER	PTHR11353	CHAPERONIN	coord: 3..538
IPR002423	Chaperonin Cpn60/GroEL/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 27..532 e-value: 6.0E-153 score: 510.0
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 24..531 e-value: 8.1E-171 score: 571.2
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 9..532
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10	GroEL	coord: 212..370 e-value: 8.1E-171 score: 571.2
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 207..379
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	GENE3D	3.30.260.10		coord: 137..406 e-value: 8.1E-171 score: 571.2
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	SUPERFAMILY	54849	GroEL-intermediate domain like	coord: 139..405
IPR012715	T-complex protein 1, alpha subunit	TIGRFAM	TIGR02340	TIGR02340	coord: 5..538 e-value: 1.6E-247 score: 820.4
IPR012715	T-complex protein 1, alpha subunit	CDD	cd03335	TCP1_alpha	coord: 8..535 e-value: 0.0 score: 866.984
None	No IPR available	PANTHER	PTHR11353:SF84	T-COMPLEX PROTEIN 1 SUBUNIT ALPHA	coord: 3..538
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00995	TCP1_3	coord: 81..89
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00750	TCP1_1	coord: 32..44
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00751	TCP1_2	coord: 53..69

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000056_pilon	contig	tig00000056_pilon:928061..929695 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra6897.t1	Ggra6897.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000056_pilon 928061..929695 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra6897.t1 ID=Ggra6897.t1|Name=Ggra6897.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=545bp
MSSLVIKGQRESGQDVRTGNVTACVAVANIVKSSLGPVGLDKMLVDEVGD
VTVTNDGATILRLLEVEHPAAKVLTELAAQQDEEVGDGTTSVVILAAELL
RRANELVRSRIHPTNIITGYRLAMREGCKYLRDKLAKPVDKLARETLINA
AKTSLSSKILGSAESLKFATMAVDAVMAVKTPTSSGKYKYPIEAIHVLKA
QGKSAKESELLPGYALNMTRSSQLMPRRVAPAKIACLDVDLRRAKMKMGV
SVLIENPEELNKAQEKELDITRDRINAVLKAGANVVLTTKGIDDAALKYF
VEAGAIAVRRVSERDLERIAKATGATVQVAMADLGGEESFDHSLLGYADE
VYEERIRDDSILIMKNCKSTAACSVLLRGPNEYMCDEMSRSFHDAVCVVK
RTLESNSVVAGGGAVEAALSIHLENFATMIGSREQLAIAEFAEALLVIPK
TLAMNAAHDSTDLVAKLKAVHHAAQNEDSKAKLSTFGLDLDAGSLRDNLA
EGVVEPAVSKKKIIQFATEAALTIIRIDDMVKIDKKEDDGSVPY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017998	Chaperone_TCP-1
IPR002423	Cpn60/GroEL/TCP-1
IPR027413	GROEL-like_equatorial_sf
IPR027409	GroEL-like_apical_dom_sf
IPR027410	TCP-1-like_intermed_sf
IPR012715	Chap_CCT_alpha
IPR002194	Chaperonin_TCP-1_CS