Ggra6681.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6681.t1
Unique NameGgra6681.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length186
Homology
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BLAST of Ggra6681.t1 vs. uniprot
Match: A0A2V3IXW8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXW8_9FLOR)

HSP 1 Score: 212 bits (539), Expect = 4.390e-67
Identity = 98/180 (54.44%), Postives = 130/180 (72.22%), Query Frame = 0 
Query:    7 LLAVAPILCAVTHGAFDTKCENNQLTGTACCPSACIRCDDS-QCPSNREAASAVGSPCCPALIDKSGRVCTQFKPPCTLRDDGPVAEQVADICISTTPKNAAWCFCFLVLTNRVVVRQRMFYREWCLSMQTLRGFYEERAVCEAFGLGGRQLDNGKLL-DVFAIVDQKVSLCGGCPRAML 184
            +LAV   L +      D  C    L+GTACCPS+C+RC+D+ QCP +  AA+A GSPCCP++I+ SGR C+ FKPPCTL + GP A+ V D+C++T PKNAAWCFC+L LTN+V V +  F+R+WCLSM+T +GF +E+ VCE FGLG R +D  +L  +V  IV+QKV  CGGCPRA +
Sbjct:    9 ILAVLTTLFSSAAADLDPTCSRGLLSGTACCPSSCLRCEDATQCPRDLAAATAPGSPCCPSVINSSGRFCSSFKPPCTLNETGPKAKDVPDLCVATNPKNAAWCFCYLTLTNKVRVTESRFFRDWCLSMKTRQGFIDEKFVCEEFGLGQR-IDIERLRQEVLPIVNQKVVQCGGCPRAQI 187
The following BLAST results are available for this feature:
BLAST of Ggra6681.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IXW84.390e-6754.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..185
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:173464..174021 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6681.t1Ggra6681.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 173464..174021 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6681.t1 ID=Ggra6681.t1|Name=Ggra6681.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=186bp
MKHMYVLLAVAPILCAVTHGAFDTKCENNQLTGTACCPSACIRCDDSQCP
SNREAASAVGSPCCPALIDKSGRVCTQFKPPCTLRDDGPVAEQVADICIS
TTPKNAAWCFCFLVLTNRVVVRQRMFYREWCLSMQTLRGFYEERAVCEAF
GLGGRQLDNGKLLDVFAIVDQKVSLCGGCPRAMLA*
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