Ggra6795.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6795.t1
Unique NameGgra6795.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length374
Homology
BLAST of Ggra6795.t1 vs. uniprot
Match: A0A2V3IG45 (Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG45_9FLOR)

HSP 1 Score: 540 bits (1392), Expect = 4.400e-191
Identity = 270/369 (73.17%), Postives = 308/369 (83.47%), Query Frame = 0
Query:    1 MAFISPIPINLRPRPAALSSSPSVTHDAPHKRCIARMTTDNGLSAQVQSPLRTQIYGPEEDTCTYGEECNLSEDIVKESPALNNLISKYVFPMRDQNTQVFFDNSISDDHTIMIVFAEDRHGLVLDVVSVLKALCVRVHRTASGESDALQFMLHRIEGELRSVQELGISLNNCVAFWITDESTGEKIFDDGCRLDQLTTCIKLELNTPYPRPRPATEDAWHRVSVQKNRADRYTVVSVQTADRPRLLTELTDAFASISIDVASATINTFAERVENTFFVTKRGFKEPLSEHDIKRALKNVAKALLKVGQREPSESLWYQVRDGTAVVIAEAIFIDEVNNRELAMFRFSQFETPNFRGRLPDVPYCPILL 369
            MAF++ IP  L PRP +   SP      P++ C       N +       L TQIYGPE+D CT+G+EC LSED+VK SPAL++L+ KYVFPMR+ NTQVFFDNS+ D HT+MIVFAEDRHGLVLDVVSVLKAL VRVHRT SGE+DAL+FML RIEGELRSV  LG+SL+NCVAFWITDESTGEKIFDDG RLDQLTTC+KLELNTPYPRPRPA E +WHR+S+QKNR DRY+V SVQT DRPRLL ELTDAFA+I+ID+ASATI TF ERVENTFFVTKRGFKEPL + DIK A++ V  ALLKVG ++P+E+LWYQVRDGTAV+IAEAIFIDEVNNRELAMFRFSQFETPNFRGRLPD PY PI++
Sbjct:    1 MAFVTAIP--LLPRPLSSRVSPR----RPYRMC-----AQNSIDKVPTPTLSTQIYGPEDDICTFGDECALSEDVVKSSPALDHLVQKYVFPMREHNTQVFFDNSLHDQHTLMIVFAEDRHGLVLDVVSVLKALSVRVHRTTSGENDALRFMLCRIEGELRSVAALGLSLSNCVAFWITDESTGEKIFDDGVRLDQLTTCVKLELNTPYPRPRPAREHSWHRLSIQKNRNDRYSVFSVQTTDRPRLLAELTDAFAAINIDIASATIKTFTERVENTFFVTKRGFKEPLQDTDIKLAMERVLAALLKVGDKQPTETLWYQVRDGTAVIIAEAIFIDEVNNRELAMFRFSQFETPNFRGRLPDAPYRPIIV 358          
BLAST of Ggra6795.t1 vs. uniprot
Match: A0A1X6P4U7 (ACT domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4U7_PORUM)

HSP 1 Score: 274 bits (701), Expect = 6.730e-86
Identity = 155/335 (46.27%), Postives = 214/335 (63.88%), Query Frame = 0
Query:   38 TTDNGLSAQVQSPLRTQIYGPEEDTCTYGEECNLSEDIVKESPALNNLISKYVFPMRDQNTQVFFDNSISDDHTIMIVFAEDRHGLVLDVVSVLKALCVRVHRTASGESDALQFMLHRIEGELRSVQELGISLNNCVAFWITDESTGEKIFDDGCRLDQLTTCIKLELNTPYPRPRPATEDAWHRVSVQKNRADRYTVVSVQTADRPRLLTELTDAFASISIDVASATINTFAERVENTFFVTKRGFKEPLSEHDIKRALKNVAKALLKVGQREPS--ESLWYQVRDGTAVVIAEAIFIDEVNNRELAMFRFSQFETPNFRGRLPDVPYCPILLD 370
            +T N  S  V S   T    P       G+E   S  + K  P     ++KYVFPMRD NT VFFD++ S   T+M+VF  DRHGL+LD+VSVLKAL +R HR  + E D+L  ++ R+EGEL S++ LG+  +N VA  ITDE TG K+ D+  +L+Q+ TCI+LEL +PYPRP   T D +HRV  ++ RA RY++++VQT DRPRLL   +   + I +DV+SATI T   RVEN+F+V     K PLS+  + RA++ V +AL      +    ESLW+Q R+G  +V+ EA+FID V+N EL  F  S++ETPNFRGRLP+ PY  + ++
Sbjct:   57 STKNAASGAVTSTDPTPSPAP----TVSGKELLSSAALEKALP-----LNKYVFPMRDTNTTVFFDHNASAKTTVMLVFTHDRHGLILDLVSVLKALDIRCHRYLTTEDDSLALIMARLEGELLSIKGLGLKTSNTVALHITDELTGLKVQDEA-KLEQIRTCIRLELKSPYPRPPVGTLD-FHRVVAERVRAGRYSILTVQTTDRPRLLARTSGYLSLIGVDVSSATIRTLGSRVENSFYVVDSNTKGPLSDEALDRAVEAVLRALRVCCPDDECVVESLWFQRREGHCLVVTEAVFIDMVDNAELQAF--SKYETPNFRGRLPNAPYMEVTVE 378          
BLAST of Ggra6795.t1 vs. uniprot
Match: A0A6T6CDN1 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CDN1_9RHOD)

HSP 1 Score: 190 bits (482), Expect = 7.520e-54
Identity = 120/294 (40.82%), Postives = 172/294 (58.50%), Query Frame = 0
Query:   76 VKESPALNNLISKYVFPMRDQNTQVFFDNSISDDHTIMIVFAEDRHGLVLDVVSVLKALCVRVHRTASGESDALQFMLHRIEGELRSVQELGISLNNCVAFWITDESTGEKIFDDGCRLDQLTTCIKLELNTPYPRPRPATEDAWHRVSVQKNRADRYTVVSVQTADRPRLLTELTDAFASISIDVASATINTFAERVENTFFVTKRGFKEPLSEHDI----KRALKNVAKALLKVGQREPSESLWYQVRDGTAVVIAEAIFID-EVNNRELAMFRFSQFETPNFRGRLPDVPY 364
            V  +PA+    SKYV P+RD N++VFFD+    + ++M+V   DRHGLVLDVVSVL  L +RV R    E+D L  +  R+E EL  + +LGIS  N +AF+IT+E  G K+ +   RL  + T IK EL+  YPRP+ A E+ WHRV V +NR    + VS   A   +L +   D FA   ++V  +++ +   R ENT+FVT+ G  +PLSE  +     +A  +V   L    QR     +WYQ R    + +AEAI +D  +   +  +  + ++ETPNFRGRLPD+PY
Sbjct:   50 VLANPAVTGERSKYVLPLRDYNSEVFFDHGRDPNASVMMVLCRDRHGLVLDVVSVLIGLGLRVVRVCDAEADCLPLLFQRMETELVELAQLGISTENVLAFFITEED-GSKV-ECPDRLAWIETMIKRELSDKYPRPQVANEN-WHRVWVHQNRGRGMSSVSFSNAVVFQLDSLALDMFARAGVEVMGSSVKSGDARTENTYFVTQNG--KPLSEDRLFEVATQATTSVLSPLSTSYQR-----VWYQARVFPHMAVAEAIVLDGSIIRTDSRLVNWEKYETPNFRGRLPDLPY 333          
BLAST of Ggra6795.t1 vs. uniprot
Match: R7QAE7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAE7_CHOCR)

HSP 1 Score: 172 bits (437), Expect = 6.040e-50
Identity = 81/120 (67.50%), Postives = 101/120 (84.17%), Query Frame = 0
Query:  250 LTDAFASISIDVASATINTFAERVENTFFVTKRGFKEPLSEHDIKRALKNVAKALLKVGQREPSESLWYQVRDGTAVVIAEAIFIDEVNNRELAMFRFSQFETPNFRGRLPDVPYCPILL 369
            ++ AFA + IDVASAT+ TFA+RVEN FFVTK+GFKEPL   DI++AL++V K LL VG+  P+E+LWYQ RDGT ++IAEAIFIDEVNN+ELA F+FSQFETPNFRGRLP+ PY P+ +
Sbjct:    1 MSKAFADVQIDVASATVKTFAKRVENHFFVTKQGFKEPLKAEDIEKALESVMKGLLSVGRPAPNETLWYQTRDGTEMMIAEAIFIDEVNNQELACFKFSQFETPNFRGRLPEAPYRPVSM 120          
BLAST of Ggra6795.t1 vs. uniprot
Match: A0A527ZB65 (ACT domain-containing protein (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A527ZB65_9HYPH)

HSP 1 Score: 58.5 bits (140), Expect = 3.550e-7
Identity = 26/59 (44.07%), Postives = 43/59 (72.88%), Query Frame = 0
Query:  222 RVSVQKNRADRYTVVSVQTADRPRLLTELTDAFASISIDVASATINTFAERVENTFFVT 280
            R  ++   ++R++V+ V+  DRP LL+E+T A + +S+D+ASA I TF E+V +TF+VT
Sbjct:    4 RAEIRNTLSNRFSVIEVEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVT 62          
BLAST of Ggra6795.t1 vs. uniprot
Match: A0A529I1E8 (ACT domain-containing protein (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A529I1E8_9HYPH)

HSP 1 Score: 58.2 bits (139), Expect = 5.850e-7
Identity = 25/59 (42.37%), Postives = 43/59 (72.88%), Query Frame = 0
Query:  222 RVSVQKNRADRYTVVSVQTADRPRLLTELTDAFASISIDVASATINTFAERVENTFFVT 280
            R  ++   ++R++V+ ++  DRP LL+E+T A + +S+D+ASA I TF E+V +TF+VT
Sbjct:   22 RAEIRNTLSNRFSVIEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVT 80          
BLAST of Ggra6795.t1 vs. uniprot
Match: A0A522RCP1 (ACT domain-containing protein (Fragment) n=1 Tax=Rhizobiaceae bacterium TaxID=1913961 RepID=A0A522RCP1_9HYPH)

HSP 1 Score: 57.8 bits (138), Expect = 6.790e-7
Identity = 25/59 (42.37%), Postives = 45/59 (76.27%), Query Frame = 0
Query:  222 RVSVQKNRADRYTVVSVQTADRPRLLTELTDAFASISIDVASATINTFAERVENTFFVT 280
            +V+++   ++R++V+ V+  DRP LL+++T A + +S+D+ASA I TF E+V +TF+VT
Sbjct:   13 QVAIRNTLSNRFSVIEVECLDRPGLLSDVTGAISDLSLDIASAHITTFGEKVIDTFYVT 71          
BLAST of Ggra6795.t1 vs. uniprot
Match: A0A833LG38 (ACT domain-containing protein n=1 Tax=Bauldia sp. TaxID=2575872 RepID=A0A833LG38_9HYPH)

HSP 1 Score: 58.5 bits (140), Expect = 1.010e-6
Identity = 27/59 (45.76%), Postives = 43/59 (72.88%), Query Frame = 0
Query:  222 RVSVQKNRADRYTVVSVQTADRPRLLTELTDAFASISIDVASATINTFAERVENTFFVT 280
            R  ++   ++R++VV V+  DRP LL+E+T A + +S+D+ASA I TF E+V +TF+VT
Sbjct:   64 RAEIRNTLSNRFSVVEVKGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVT 122          
BLAST of Ggra6795.t1 vs. uniprot
Match: A0A434MV30 (ACT domain-containing protein (Fragment) n=1 Tax=Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1 TaxID=2496772 RepID=A0A434MV30_9HYPH)

HSP 1 Score: 58.5 bits (140), Expect = 1.130e-6
Identity = 26/59 (44.07%), Postives = 43/59 (72.88%), Query Frame = 0
Query:  222 RVSVQKNRADRYTVVSVQTADRPRLLTELTDAFASISIDVASATINTFAERVENTFFVT 280
            R  ++   ++R++V+ V+  DRP LL+E+T A + +S+D+ASA I TF E+V +TF+VT
Sbjct:   70 RAEIRNTLSNRFSVIEVEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVT 128          
BLAST of Ggra6795.t1 vs. uniprot
Match: A0A526YHB8 (ACT domain-containing protein (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A526YHB8_9HYPH)

HSP 1 Score: 58.5 bits (140), Expect = 1.330e-6
Identity = 26/59 (44.07%), Postives = 43/59 (72.88%), Query Frame = 0
Query:  222 RVSVQKNRADRYTVVSVQTADRPRLLTELTDAFASISIDVASATINTFAERVENTFFVT 280
            R  ++   ++R++V+ V+  DRP LL+E+T A + +S+D+ASA I TF E+V +TF+VT
Sbjct:   79 RAEIRNTLSNRFSVIEVEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVT 137          
The following BLAST results are available for this feature:
BLAST of Ggra6795.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IG454.400e-19173.17Bifunctional uridylyltransferase/uridylyl-removing... [more]
A0A1X6P4U76.730e-8646.27ACT domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A6T6CDN17.520e-5440.82Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
R7QAE76.040e-5067.50Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A527ZB653.550e-744.07ACT domain-containing protein (Fragment) n=1 Tax=M... [more]
A0A529I1E85.850e-742.37ACT domain-containing protein (Fragment) n=1 Tax=M... [more]
A0A522RCP16.790e-742.37ACT domain-containing protein (Fragment) n=1 Tax=R... [more]
A0A833LG381.010e-645.76ACT domain-containing protein n=1 Tax=Bauldia sp. ... [more]
A0A434MV301.130e-644.07ACT domain-containing protein (Fragment) n=1 Tax=M... [more]
A0A526YHB81.330e-644.07ACT domain-containing protein (Fragment) n=1 Tax=M... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010043Bifunctional uridylyltransferase/uridylyl-removing enzymePANTHERPTHR47320BIFUNCTIONAL URIDYLYLTRANSFERASE/URIDYLYL-REMOVING ENZYMEcoord: 96..140
coord: 219..300
IPR002912ACT domainPROSITEPS51671ACTcoord: 235..312
score: 12.979361
IPR045865ACT-like domainSUPERFAMILY55021ACT-likecoord: 231..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:534614..535735 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6795.t1Ggra6795.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 534614..535735 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6795.t1 ID=Ggra6795.t1|Name=Ggra6795.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=374bp
MAFISPIPINLRPRPAALSSSPSVTHDAPHKRCIARMTTDNGLSAQVQSP
LRTQIYGPEEDTCTYGEECNLSEDIVKESPALNNLISKYVFPMRDQNTQV
FFDNSISDDHTIMIVFAEDRHGLVLDVVSVLKALCVRVHRTASGESDALQ
FMLHRIEGELRSVQELGISLNNCVAFWITDESTGEKIFDDGCRLDQLTTC
IKLELNTPYPRPRPATEDAWHRVSVQKNRADRYTVVSVQTADRPRLLTEL
TDAFASISIDVASATINTFAERVENTFFVTKRGFKEPLSEHDIKRALKNV
AKALLKVGQREPSESLWYQVRDGTAVVIAEAIFIDEVNNRELAMFRFSQF
ETPNFRGRLPDVPYCPILLDGEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010043UTase/UR
IPR002912ACT_dom
IPR045865ACT-like_dom_sf