Ggra1775.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1775.t1
Unique NameGgra1775.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length220
Homology
BLAST of Ggra1775.t1 vs. uniprot
Match: A0A2V3ILU4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILU4_9FLOR)

HSP 1 Score: 293 bits (751), Expect = 2.170e-97
Identity = 131/219 (59.82%), Postives = 167/219 (76.26%), Query Frame = 0
Query:    1 MSLTRIHTSALLHRKVWIIPFDEMWQLGLTDGPGDECPLALRALAEHVLSGETVETAASNLAHRIGKHRRITALHRLGKPFILTQGTDREVVYVFALPIRGVFHRKRRMLVSQVVKPVDFVQHVSILLRSSRDEVDPRLREHLCSRERAEWMVRAIAYALRQFHIKGMVPRSNPMDNAAFNDTMCCKKDVDISRDLKMCGISCDQEGLYNILSYFPQTR 219
            +SL R HTS LLHRKVW++P DEMWQLGL+D   + CP A+ A   HVLSGE+  + AS LAH I + R +T LH LGKPF+L  G++RE+V+ FALP++GVF RK +   +QV+KPVDFVQH + LL S+ ++    L  H CS+E AEWM+R +AYALR FH++ ++P+SNPMDN AFNDT+CCK DV +S DL+MCGI CDQ GLYNI+SYFPQTR
Sbjct:   62 LSLARAHTSGLLHRKVWVVPLDEMWQLGLSDASQEGCPQAMGAFTRHVLSGESTASTASELAHDIRRGRGVTELHALGKPFLLVHGSNREIVHAFALPVQGVFPRKGKKWFTQVIKPVDFVQHTTTLLMSNSEQAGDLLLRHFCSKEHAEWMLRMVAYALRLFHVRRLIPKSNPMDNVAFNDTLCCKADVRVSHDLRMCGIPCDQNGLYNIISYFPQTR 280          
BLAST of Ggra1775.t1 vs. uniprot
Match: R7QLS9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLS9_CHOCR)

HSP 1 Score: 207 bits (527), Expect = 1.900e-63
Identity = 98/219 (44.75%), Postives = 154/219 (70.32%), Query Frame = 0
Query:    2 SLTRIHTSALLHRKVWIIPFDEMWQLGLTD-GPGDECPLALRALAEHVLSGETVETAASNLAHRIGKHRRITALHRLGKPFILTQGTDREVVYVFALPIRGVFHRKRRML-VSQVVKPVDFVQHVSILLRSSRDEVDPRLREHLCSRERAEWMVRAIAYALRQFHIKGMVPRSNPMDNAAFNDTMCCKKDVDISRDLKMCGISCDQEGLYNILSYFPQT 218
            SLT ++   LLH KVWI+PFD+MW +GL++    D C  +L A+  HV SG ++ +  S +A R+ +  R+  L  LG+PF+L +G+++EVV+VFAL ++ VF R+++    +QV+KPV  +Q  S    +S +E   +++++ CS ERA W+ RA++YA+R+F++KG+VP+SNPM++A  ND +CC++D+D + DL  C + CD EGLYNI+S FPQT
Sbjct:   63 SLTHVYQDNLLHHKVWIVPFDDMWHIGLSELAWRDSCRGSLGAVESHVTSGASIASVVSEVAGRMRRMSRVGPLIPLGRPFLLKRGSEQEVVHVFALIVQDVFSRRQQQSSFTQVIKPVQLMQDTSTPAHTS-EEWSKQMQQNYCSAERARWLGRAVSYAMRRFNLKGLVPKSNPMEDARHNDALCCRRDIDETEDLLHCALPCDGEGLYNIISRFPQT 280          
The following BLAST results are available for this feature:
BLAST of Ggra1775.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ILU42.170e-9759.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QLS91.900e-6344.75Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:594810..595469 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1775.t1Ggra1775.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 594810..595469 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1775.t1 ID=Ggra1775.t1|Name=Ggra1775.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=220bp
MSLTRIHTSALLHRKVWIIPFDEMWQLGLTDGPGDECPLALRALAEHVLS
GETVETAASNLAHRIGKHRRITALHRLGKPFILTQGTDREVVYVFALPIR
GVFHRKRRMLVSQVVKPVDFVQHVSILLRSSRDEVDPRLREHLCSRERAE
WMVRAIAYALRQFHIKGMVPRSNPMDNAAFNDTMCCKKDVDISRDLKMCG
ISCDQEGLYNILSYFPQTR*
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