Ggra1764.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1764.t1
Unique NameGgra1764.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length273
Homology
The following BLAST results are available for this feature:
BLAST of Ggra1764.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 20..66
e-value: 4.2E-5
score: 23.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 17..68
score: 9.787932
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 17..90
e-value: 6.4E-10
score: 41.0
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 18..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:570078..570896 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1764.t1Ggra1764.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 570078..570896 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1764.t1 ID=Ggra1764.t1|Name=Ggra1764.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=273bp
MERSRSQATPLRGAVSRPKRLHREVEQKRRMRVAEQITLLRRALCDTQAE
KSDTVSVLQRAVHFVSVAQSTIATLQAENEALRRERARVVGVEWSGAPIG
SAASVADGLQRDVVSNDPCFPTAQSSTVMQSAHDCCFPSSSRTATPWTHA
QNGVTYDRGAHFAPPPSSSHASLPHFDMVRQYPQQPTHHAQQQRFVPGRA
PLPYTTSPEVVTHAAHMPPSAAQRTVAPVETRQSQPPPHSSPPLSRTQPL
NVPSRSYDVKPVVSTPRDLSNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR036638HLH_DNA-bd_sf