Ggra1803.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1803.t1
Unique NameGgra1803.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length314
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:670075..671016 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1803Ggra1803Gracilaria gracilis GNS1m malegenetig00000050_pilon 670075..671016 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1803.t1.stop1Ggra1803.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000050_pilon 670075..670077 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1803.t1.CDS1Ggra1803.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000050_pilon 670075..671016 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1803.t1.exon1Ggra1803.t1.exon1Gracilaria gracilis GNS1m maleexontig00000050_pilon 670075..671016 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1803.t1.start1Ggra1803.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000050_pilon 671014..671016 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1803.t1Ggra1803.t1Gracilaria gracilis GNS1m malepolypeptidetig00000050_pilon 670075..671016 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1803.t1 ID=Ggra1803.t1|Name=Ggra1803.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=314bp
MKDVFEVNYEKDFEEINLHGRGDHEMPQGEYMAFRGLRASLRNKISSGIR
STGRKVSHALRKIGRKGRSIKEKIKMCVRVTLCHSGSGPEEETLGIYDLL
VPLSGTNSSRAGNPVTKEPEMKAGETIPQPCSVIEKGVLPALSLTEDQSR
ARDMATEGAQPSTVEAEREIDAPRMLNVLSSWAALLGREYLIKQTSADKA
GYQADPESLKETRATNEIEGCIHCGMEEVPLATRENSHVSFSSSMCEISS
NDQRETESLLGLRSILQEENKPCLISIEDPSDITSTSVTEKYNDEIDAIV
NSIIGMVLESMKP*
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spliced messenger RNA

>Ggra1803.t1 ID=Ggra1803.t1|Name=Ggra1803.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=942bp|location=Sequence derived from alignment at tig00000050_pilon:670075..671016- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAAGATGTTTTCGAAGTCAACTACGAGAAGGATTTCGAGGAGATCAA
CCTTCACGGTCGAGGTGATCACGAAATGCCACAAGGAGAATATATGGCTT
TTAGGGGGTTGAGGGCGAGCCTGCGAAACAAAATCTCTTCGGGGATAAGA
TCGACAGGGAGAAAGGTTTCCCATGCTTTGAGAAAGATTGGCCGTAAAGG
CAGGTCTATCAAGGAGAAGATCAAGATGTGCGTTCGAGTCACGTTGTGTC
ATAGTGGAAGCGGTCCTGAGGAGGAAACTCTTGGGATCTATGATTTATTG
GTTCCTCTATCAGGAACGAACAGTTCTAGAGCTGGGAACCCGGTCACCAA
AGAACCGGAAATGAAGGCAGGGGAAACCATTCCTCAGCCGTGCAGCGTGA
TTGAGAAAGGTGTGCTACCCGCTCTGTCCCTCACTGAAGACCAGAGCAGA
GCTCGAGATATGGCTACTGAGGGGGCTCAACCGTCAACGGTTGAAGCAGA
AAGGGAAATTGACGCGCCCCGAATGCTCAACGTCCTCAGTTCTTGGGCGG
CACTGCTGGGCAGAGAATACTTAATCAAGCAGACTTCTGCTGACAAAGCA
GGCTACCAGGCTGATCCTGAAAGCCTCAAAGAAACCAGAGCCACGAATGA
AATAGAAGGTTGTATTCATTGTGGAATGGAGGAGGTACCGCTCGCTACTA
GGGAGAATAGTCACGTCTCCTTTTCTAGTTCAATGTGTGAGATTAGCAGC
AATGATCAAAGGGAAACCGAGAGTTTATTGGGTTTGCGCAGTATATTGCA
GGAAGAAAACAAGCCTTGTTTGATATCTATCGAAGATCCATCCGACATTA
CAAGCACGTCTGTGACTGAGAAATATAATGACGAAATCGATGCGATCGTC
AACTCTATAATTGGAATGGTTTTGGAGTCCATGAAACCATGA
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protein sequence of Ggra1803.t1

>Ggra1803.t1 ID=Ggra1803.t1|Name=Ggra1803.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=314bp
MKDVFEVNYEKDFEEINLHGRGDHEMPQGEYMAFRGLRASLRNKISSGIR
STGRKVSHALRKIGRKGRSIKEKIKMCVRVTLCHSGSGPEEETLGIYDLL
VPLSGTNSSRAGNPVTKEPEMKAGETIPQPCSVIEKGVLPALSLTEDQSR
ARDMATEGAQPSTVEAEREIDAPRMLNVLSSWAALLGREYLIKQTSADKA
GYQADPESLKETRATNEIEGCIHCGMEEVPLATRENSHVSFSSSMCEISS
NDQRETESLLGLRSILQEENKPCLISIEDPSDITSTSVTEKYNDEIDAIV
NSIIGMVLESMKP*
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mRNA from alignment at tig00000050_pilon:670075..671016-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1803.t1 ID=Ggra1803.t1|Name=Ggra1803.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=942bp|location=Sequence derived from alignment at tig00000050_pilon:670075..671016- (Gracilaria gracilis GNS1m male)
ATGAAAGATGTTTTCGAAGTCAACTACGAGAAGGATTTCGAGGAGATCAA
CCTTCACGGTCGAGGTGATCACGAAATGCCACAAGGAGAATATATGGCTT
TTAGGGGGTTGAGGGCGAGCCTGCGAAACAAAATCTCTTCGGGGATAAGA
TCGACAGGGAGAAAGGTTTCCCATGCTTTGAGAAAGATTGGCCGTAAAGG
CAGGTCTATCAAGGAGAAGATCAAGATGTGCGTTCGAGTCACGTTGTGTC
ATAGTGGAAGCGGTCCTGAGGAGGAAACTCTTGGGATCTATGATTTATTG
GTTCCTCTATCAGGAACGAACAGTTCTAGAGCTGGGAACCCGGTCACCAA
AGAACCGGAAATGAAGGCAGGGGAAACCATTCCTCAGCCGTGCAGCGTGA
TTGAGAAAGGTGTGCTACCCGCTCTGTCCCTCACTGAAGACCAGAGCAGA
GCTCGAGATATGGCTACTGAGGGGGCTCAACCGTCAACGGTTGAAGCAGA
AAGGGAAATTGACGCGCCCCGAATGCTCAACGTCCTCAGTTCTTGGGCGG
CACTGCTGGGCAGAGAATACTTAATCAAGCAGACTTCTGCTGACAAAGCA
GGCTACCAGGCTGATCCTGAAAGCCTCAAAGAAACCAGAGCCACGAATGA
AATAGAAGGTTGTATTCATTGTGGAATGGAGGAGGTACCGCTCGCTACTA
GGGAGAATAGTCACGTCTCCTTTTCTAGTTCAATGTGTGAGATTAGCAGC
AATGATCAAAGGGAAACCGAGAGTTTATTGGGTTTGCGCAGTATATTGCA
GGAAGAAAACAAGCCTTGTTTGATATCTATCGAAGATCCATCCGACATTA
CAAGCACGTCTGTGACTGAGAAATATAATGACGAAATCGATGCGATCGTC
AACTCTATAATTGGAATGGTTTTGGAGTCCATGAAACCATGA
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Coding sequence (CDS) from alignment at tig00000050_pilon:670075..671016-

>Ggra1803.t1 ID=Ggra1803.t1|Name=Ggra1803.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=942bp|location=Sequence derived from alignment at tig00000050_pilon:670075..671016- (Gracilaria gracilis GNS1m male)
ATGAAAGATGTTTTCGAAGTCAACTACGAGAAGGATTTCGAGGAGATCAA
CCTTCACGGTCGAGGTGATCACGAAATGCCACAAGGAGAATATATGGCTT
TTAGGGGGTTGAGGGCGAGCCTGCGAAACAAAATCTCTTCGGGGATAAGA
TCGACAGGGAGAAAGGTTTCCCATGCTTTGAGAAAGATTGGCCGTAAAGG
CAGGTCTATCAAGGAGAAGATCAAGATGTGCGTTCGAGTCACGTTGTGTC
ATAGTGGAAGCGGTCCTGAGGAGGAAACTCTTGGGATCTATGATTTATTG
GTTCCTCTATCAGGAACGAACAGTTCTAGAGCTGGGAACCCGGTCACCAA
AGAACCGGAAATGAAGGCAGGGGAAACCATTCCTCAGCCGTGCAGCGTGA
TTGAGAAAGGTGTGCTACCCGCTCTGTCCCTCACTGAAGACCAGAGCAGA
GCTCGAGATATGGCTACTGAGGGGGCTCAACCGTCAACGGTTGAAGCAGA
AAGGGAAATTGACGCGCCCCGAATGCTCAACGTCCTCAGTTCTTGGGCGG
CACTGCTGGGCAGAGAATACTTAATCAAGCAGACTTCTGCTGACAAAGCA
GGCTACCAGGCTGATCCTGAAAGCCTCAAAGAAACCAGAGCCACGAATGA
AATAGAAGGTTGTATTCATTGTGGAATGGAGGAGGTACCGCTCGCTACTA
GGGAGAATAGTCACGTCTCCTTTTCTAGTTCAATGTGTGAGATTAGCAGC
AATGATCAAAGGGAAACCGAGAGTTTATTGGGTTTGCGCAGTATATTGCA
GGAAGAAAACAAGCCTTGTTTGATATCTATCGAAGATCCATCCGACATTA
CAAGCACGTCTGTGACTGAGAAATATAATGACGAAATCGATGCGATCGTC
AACTCTATAATTGGAATGGTTTTGGAGTCCATGAAACCATGA
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