Ggra1781.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1781.t1
Unique Name	Ggra1781.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	541

Homology

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BLAST of Ggra1781.t1 vs. uniprot
Match: A0A2V3IJ20 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ20_9FLOR)

HSP 1 Score: 378 bits (970), Expect = 7.360e-122
Identity = 271/554 (48.92%), Postives = 344/554 (62.09%), Query Frame = 0

Query:    1 MSSSFPTSWEPYGSSQQNAALAWRRSATLPSQQPPPLTTRWQSTQDASQASPLPSLDPSQR---ELSAFQANDRDQKSVARFESLREEMQQVTAQLRQLNANIESIRNGQAQPFPALIAEVGRLSQLIGELVQRPGVHGRQSNLEFAVASSEKRVTDTILAITDIVTSVQTSCAAFIPRLDSGLGSVERLIHAATSSVAADVPKWFELAFQQMATHHVAPMLAASEARLKAQFEKSYANMITSVEKHVSMAVGNGVAQVLNRISLEQTLGTQPTSVFPSQTGANLFS-PNDVG-DTKPQDKPTSVLNKDTNVKQSPKTSPVEKSVKDNTGLPGPPPLTTNSPTAKRVSGGEDLRFATDSNIVHETIASLGTAANPKAVAV-PNGSTKGHSSIGPGT-------KPQ-PLTTTQNEVIILESKEAAKQMPSRKEEEPAVEELDLFEENEAHGKGKSSKSKKKEVAQRRNGKRXXXXXXXXXXDYTEPNAVSGTDSSESKEPSEEXXXXESEWECGESDAGSQSSGASHGGEGFHRPGAKRTKRSFARRSKRRRQA 540
            MSSSFPTSWEPYGSSQQNAALAWRRSATLPSQQPPPL+ RWQ+  DA Q SPLPSLD +QR   +LSAFQANDRD KS+ RFE+LRE++QQ+  Q+RQL+AN+E +R+ QAQPFPALIAEV RLSQL+ EL+QRP  H  QS L+F VA+SEKR+TDT+L+I + V +VQ +CA+   +LDSG+ S+E+LI A T +V +DVPKWFE AF+QM  HHV P ++ SE R+  +        +  +EKHV+MAVG+GVAQ LNRISLE+TLG QP+ +F SQ   N+F  P+ V  +T     P  + N     +  P+ SP EK V+          +TT +   K           + +N V+ T          + +++  NG  K   S    T       KPQ P ++   E    +SK         K+    VEE+D+F + E  G    S+ K +E         XXXXXXXXX  YT+PN  S TDSSESKE    XXXX        S + S SS  SH G+   +PGAKR KRSF RRSKRRR+A
Sbjct:    1 MSSSFPTSWEPYGSSQQNAALAWRRSATLPSQQPPPLSNRWQTPPDAPQPSPLPSLDHTQRVAPDLSAFQANDRDHKSIVRFEALREQIQQIAGQIRQLDANLEMLRSSQAQPFPALIAEVSRLSQLVAELLQRPARHPAQSELDFTVAASEKRLTDTVLSINNAVAAVQNACASLPSQLDSGIASLEQLIRATTDNVCSDVPKWFEAAFKQMVQHHVVPAISQSETRITNKLHNMSRTTVADIEKHVTMAVGHGVAQALNRISLERTLGPQPSQLFDSQP-TNIFPRPDKVQPNTATTLSPPEIQNGHAVDRAKPR-SPAEK-VEQKPMPVSSLAVTTAASNVKCKPTKASEAVDSQTNSVNRTKPDTSDPVVGQPLSILSNGDKKTLISAASNTTAASLPKKPQDPKSSALAETQTQDSKHTQD-----KDNHSDVEEVDIFSDKEETGNDPRSE-KDREGKXXXXXXXXXXXXXXXXQLYTKPNVQSDTDSSESKELXXXXXXXXXXXXXXXSGSESHSSAESHDGKKSPKPGAKRGKRSFVRRSKRRRRA 545

The following BLAST results are available for this feature:

BLAST of Ggra1781.t1 vs. uniprot

BLAST of Ggra1781.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IJ20	7.360e-122	48.92	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 79..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..320
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 411..441
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 372..540
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 524..540
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 442..460
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 485..500
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 378..404

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000050_pilon	contig	tig00000050_pilon:608661..610283 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1781.t1	Ggra1781.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000050_pilon 608661..610283 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1781.t1 ID=Ggra1781.t1|Name=Ggra1781.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=541bp
MSSSFPTSWEPYGSSQQNAALAWRRSATLPSQQPPPLTTRWQSTQDASQA
SPLPSLDPSQRELSAFQANDRDQKSVARFESLREEMQQVTAQLRQLNANI
ESIRNGQAQPFPALIAEVGRLSQLIGELVQRPGVHGRQSNLEFAVASSEK
RVTDTILAITDIVTSVQTSCAAFIPRLDSGLGSVERLIHAATSSVAADVP
KWFELAFQQMATHHVAPMLAASEARLKAQFEKSYANMITSVEKHVSMAVG
NGVAQVLNRISLEQTLGTQPTSVFPSQTGANLFSPNDVGDTKPQDKPTSV
LNKDTNVKQSPKTSPVEKSVKDNTGLPGPPPLTTNSPTAKRVSGGEDLRF
ATDSNIVHETIASLGTAANPKAVAVPNGSTKGHSSIGPGTKPQPLTTTQN
EVIILESKEAAKQMPSRKEEEPAVEELDLFEENEAHGKGKSSKSKKKEVA
QRRNGKRGVRQVRQRKQDYTEPNAVSGTDSSESKEPSEEEGEEESEWECG
ESDAGSQSSGASHGGEGFHRPGAKRTKRSFARRSKRRRQA*