Ggra1743.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1743.t1
Unique NameGgra1743.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length364
Homology
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BLAST of Ggra1743.t1 vs. uniprot
Match: A0A2V3IMQ5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMQ5_9FLOR)

HSP 1 Score: 301 bits (771), Expect = 2.280e-97
Identity = 159/263 (60.46%), Postives = 196/263 (74.52%), Query Frame = 0 
Query:    1 MAGIKHATKKKFNRSTTRKKTIQSGISSEFSTLRSQLTAISTSVRSLVKTIGTARDSWLSVAKEEKVFAETLSAAFHDESDVKSHAKEVETAVHQMQQKLLANEGPEAPHNKVIAVLQGYLKQIEDIEKDCADVETSYTEVLRYQKKVDXXXXXPGKRQKQLQRNLEXXSVAXXXXXXXXXXXXXXXXXXXXXXXVVFQCAHHAFWIAQDRYFTTVNQITQSVRWESVSVQERLMNVDFHATEKLEPIPRAVALLPPVTASEV 263
            MAGIKHATKKKF +STTRKKTIQSGIS+EF+ LR QL+++ T+V+SL+  IGTARDSWL+++KE+  FAET+ AA   E +V+SHAKEV+ A+HQ+QQKLLA EG  +PH KV AVL GYLK ++D+E D + V+ SY+EVLRYQKKVD     PGKRQ QLQRNLE  +VA                       VV QCAHHAFWIAQ  YFT V+++T+ VRWESVSVQER+M+VD +   KL  IPRA+A++PPVTASEV
Sbjct:    1 MAGIKHATKKKFAKSTTRKKTIQSGISAEFTNLRKQLSSVGTAVKSLIANIGTARDSWLAISKEQTNFAETIYAAVSTEGEVRSHAKEVQAALHQLQQKLLATEGANSPHRKVTAVLDGYLKNVQDVEADGSHVQDSYSEVLRYQKKVDRLQKKPGKRQSQLQRNLEKLTVARNAYQAKLDENVARMKEVFEKHEVVLQCAHHAFWIAQQGYFTAVDEVTREVRWESVSVQERVMDVDINRNAKLALIPRALAIMPPVTASEV 263
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BLAST of Ggra1743.t1 vs. uniprot
Match: R7QL81 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL81_CHOCR)

HSP 1 Score: 212 bits (540), Expect = 1.640e-61
Identity = 113/263 (42.97%), Postives = 165/263 (62.74%), Query Frame = 0 
Query:    1 MAGIKHATKKKFNRSTTRKKTIQSGISSEFSTLRSQLTAISTSVRSLVKTIGTARDSWLSVAKEEKVFAETLSAAFHDESDVKSHAKEVETAVHQMQQKLLANEGPEAPHNKVIAVLQGYLKQIEDIEKDCADVETSYTEVLRYQKKVDXXXXXPGKRQKQLQRNLEXXSVAXXXXXXXXXXXXXXXXXXXXXXXVVFQCAHHAFWIAQDRYFTTVNQITQSVRWESVSVQERLMNVDFHATEKLEPIPRAVALLPPVTASEV 263
            M GIKHATKK F ++ TR +TI+SGI++E++  RS+L A  T+++SL+K I      W ++AK +  FA  L AA  ++  V+SHA+EVE  V Q+Q+ +L ++G   PH +V AVL+ YLK +E +++  A VE SYTEVLRY+KKVD       KR+  L RN+   + A                        VFQCAHHAFW+AQ++Y   +N  T+S+RWES++V+E L+N+D + + KL P+PR   L+PP  A+E+
Sbjct:    1 MPGIKHATKKHFAKAKTRSRTIKSGINAEYTDYRSKLEATQTAIKSLIKKIQATPQVWSAIAKHQSSFASALHAAIANDGVVRSHAREVEGTVRQLQRLILEDDGAATPHRRVTAVLEAYLKSVETVQEGYAQVEMSYTEVLRYEKKVDKLNKKQKKRE-ILDRNVSKLAAARVEHDNKLAAIMERMKTTYNKHEAVFQCAHHAFWLAQEKYSAVINDTTKSIRWESMAVREHLVNIDVNNSPKLPPLPRVQMLMPPTEATEI 262
The following BLAST results are available for this feature:
BLAST of Ggra1743.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IMQ52.280e-9760.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QL811.640e-6142.97Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 173..193
NoneNo IPR availableCOILSCoilCoilcoord: 117..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 278..300
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60Arfaptin homology (AH) domain/BAR domaincoord: 19..227
e-value: 1.0E-45
score: 157.8
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 27..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:527573..528664 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1743.t1Ggra1743.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 527573..528664 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1743.t1 ID=Ggra1743.t1|Name=Ggra1743.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=364bp
MAGIKHATKKKFNRSTTRKKTIQSGISSEFSTLRSQLTAISTSVRSLVKT
IGTARDSWLSVAKEEKVFAETLSAAFHDESDVKSHAKEVETAVHQMQQKL
LANEGPEAPHNKVIAVLQGYLKQIEDIEKDCADVETSYTEVLRYQKKVDK
MQKKPGKRQKQLQRNLEKLSVARGEHQTKLDDMIKRMKTAQEKHQVVFQC
AHHAFWIAQDRYFTTVNQITQSVRWESVSVQERLMNVDFHATEKLEPIPR
AVALLPPVTASEVTPPQILPPTPSKDKEAVKLPIEKQEGSKPEENKIPET
PLKIPETPPKIPETPLKIPETPPKIPETPLKIPETPPKIPETPLSTPQKA
VESEPVTPEVKAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf