Ggra1851.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1851.t1
Unique Name	Ggra1851.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	300

Homology

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BLAST of Ggra1851.t1 vs. uniprot
Match: A0A2V3IPW8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPW8_9FLOR)

HSP 1 Score: 256 bits (654), Expect = 1.730e-77
Identity = 116/199 (58.29%), Postives = 152/199 (76.38%), Query Frame = 0

Query:    1 MPFLRCPEEYEYQGLVRSLVTRMLANDTVPDPNGNPLGMLLLQPPYDKLYSLNRRCSGDNAATEARVRAGLGGFMFGWHNLEFFDIALSEREHLYVKIPQNWADVDAPRSLSVITPPVLSYYSDDVLSDTPISERIMRIAYAGWALYTLMAFLQAATDGVKVFTRTKDPRLNYSRGFPGSSGSQEPPGLGRLFLLPYGL 199
            MPFLRCPEEY+ Q  ++ L+ RM  +   P  + NPL +++   PYD++Y LNR   GDN ATEAR+R+   G+MF WHN+EFFD++ ++RE LYV+ PQNW + D  R LSVITPPVL+YYS +VL D+ +SER+MRIA A WA+  LMAFLQ+ ++GV+VFTRT+DPR+N+ RGFPG   ++EPPGLGRLF LPYGL
Sbjct:  200 MPFLRCPEEYQCQARMQDLIGRMATDVDFPSADSNPLQLVMFSRPYDRMYWLNRCRWGDNIATEARLRSNRDGYMFCWHNIEFFDVSPADREKLYVRAPQNWGEFDVTRDLSVITPPVLAYYSGEVLRDSALSERVMRIAIAEWAVCALMAFLQSVSEGVRVFTRTEDPRVNFFRGFPGQPNTREPPGLGRLFPLPYGL 398

[Close]

BLAST of Ggra1851.t1 vs. uniprot
Match: A0A2V3IV02 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV02_9FLOR)

HSP 1 Score: 253 bits (647), Expect = 1.080e-74
Identity = 116/199 (58.29%), Postives = 151/199 (75.88%), Query Frame = 0

Query:    1 MPFLRCPEEYEYQGLVRSLVTRMLANDTVPDPNGNPLGMLLLQPPYDKLYSLNRRCSGDNAATEARVRAGLGGFMFGWHNLEFFDIALSEREHLYVKIPQNWADVDAPRSLSVITPPVLSYYSDDVLSDTPISERIMRIAYAGWALYTLMAFLQAATDGVKVFTRTKDPRLNYSRGFPGSSGSQEPPGLGRLFLLPYGL 199
            MPFLRCPEEY+ Q  +R L+ RM  +   P  + NPL +++   PYD++Y LNRR  GDN ATEAR+R+   G+MF W N+EFFD++ ++RE LYV+ PQNW + D  R LSVI PPVL+YYS +VL ++ +SER+MRIA A WA+  LMAFLQAA++GV+VFTRT+DPR+N+ RGFP    ++EPPGLGRLF LPYGL
Sbjct:  200 MPFLRCPEEYQCQARMRDLIGRMATDVDFPSADSNPLQLVMFSRPYDRMYWLNRRRWGDNIATEARLRSNRDGYMFCWQNIEFFDVSPADREKLYVRAPQNWGEFDVTRDLSVIIPPVLAYYSGEVLRESALSERVMRIAIAEWAVCALMAFLQAASEGVRVFTRTEDPRVNFFRGFPRQPNTREPPGLGRLFPLPYGL 398

The following BLAST results are available for this feature:

BLAST of Ggra1851.t1 vs. uniprot

BLAST of Ggra1851.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IPW8	1.730e-77	58.29	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3IV02	1.080e-74	58.29	Uncharacterized protein n=3 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..276

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000050_pilon	contig	tig00000050_pilon:936552..937601 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1851.t1	Ggra1851.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000050_pilon 936552..937601 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1851.t1 ID=Ggra1851.t1|Name=Ggra1851.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=300bp
MPFLRCPEEYEYQGLVRSLVTRMLANDTVPDPNGNPLGMLLLQPPYDKLY
SLNRRCSGDNAATEARVRAGLGGFMFGWHNLEFFDIALSEREHLYVKIPQ
NWADVDAPRSLSVITPPVLSYYSDDVLSDTPISERIMRIAYAGWALYTLM
AFLQAATDGVKVFTRTKDPRLNYSRGFPGSSGSQEPPGLGRLFLLPYGLF
PAMSVGGAGMPAVAHRLVPQFARPSLEFPGVEGYYPLGFMDPSKQPDDED
AVMHPSRNQKTTRALPSPTSKEVGIQTPSGGVEEQEAFQRLRERCLAAH*