Ggra1766.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1766.t1
Unique NameGgra1766.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length420
Homology
BLAST of Ggra1766.t1 vs. uniprot
Match: A0A2V3IMQ6 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMQ6_9FLOR)

HSP 1 Score: 643 bits (1658), Expect = 8.100e-230
Identity = 327/419 (78.04%), Postives = 358/419 (85.44%), Query Frame = 0
Query:    1 MGSASMENTICENDWAVLQSTDGRKVLGNVTKTSTARIGKRKRKISALLGKQWGDTFAVAPDDSLQPVPDVLEETPDETDMDTGRTNQYLQDDNENQRLRQAAIQKLKEEGVHGEQLVQTVVKHSSTFENKTPFSQQKYLQRKRAKFDIRVRVLKPTALTLCETYFEKSPEKTLHLRPDALGIVLGYSGVRSGARVLLYENCTGLLTGAVAERLGGIGRVLNVFTGNTPPAIEIVRMLNLGPSGMRTIVHTPIELFSKLDVQEKEDDQPLKYGAKE--EDGDSTPPETTHQPSAKRAEAIAQRSRRGMVKGWLREGCDCLIVATRYDVVQVFDTLLKHVAPSGCFAAYCTHLQDAADLQYALQLSKMAIRVELMEVNLVNHQILPGRSHPAMTDSATGGYVVTGIRIVSPNEEQSEDYS 417
            MGS    +TICENDW VLQS+DG+KVLGNVT  S+ RIGKRKRKI ALLGK WGDTFAV   D LQPV D+ EETPDE DM T R NQ+LQDDN NQ LRQ+AI KLKE GVHGE LVQTVVKHSSTF +KTPFSQ KYLQRKRAKFDIRVRV KPTALT+CETYFEKSPEKT+ LR DALG+VLGYSGVRSGARVLLYENCTGLLT AVAERLGG G V+NVFTG+TPP IEI+RMLNLG + M+TI HTP+EL S +  +E EDDQPLKYG +E  E G +      H PSAKRAEAIAQR +RG VK W+R GCDCLIVATR+DVV+VFD LLKHVAPSGCFAAYCTHLQDAADLQYALQLSKMAIRVELMEVN+VNHQILPGRSHPAMTDSATGGY+V+GIRI+SPNEE+ E+ S
Sbjct:    1 MGSEPERDTICENDWVVLQSSDGKKVLGNVTNNSSVRIGKRKRKIGALLGKHWGDTFAVTAQDFLQPVADIPEETPDEKDMGTARNNQHLQDDNANQTLRQSAILKLKEAGVHGESLVQTVVKHSSTFHSKTPFSQHKYLQRKRAKFDIRVRVFKPTALTVCETYFEKSPEKTMSLRADALGMVLGYSGVRSGARVLLYENCTGLLTAAVAERLGGNGTVINVFTGHTPPGIEIIRMLNLGETRMKTIAHTPVELLSHVHEREVEDDQPLKYGPREGQEAGGTANGNNEHVPSAKRAEAIAQRPKRGEVKRWIRRGCDCLIVATRFDVVKVFDVLLKHVAPSGCFAAYCTHLQDAADLQYALQLSKMAIRVELMEVNMVNHQILPGRSHPAMTDSATGGYIVSGIRILSPNEEEPEEQS 419          
BLAST of Ggra1766.t1 vs. uniprot
Match: R7QJI5 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJI5_CHOCR)

HSP 1 Score: 543 bits (1398), Expect = 2.760e-190
Identity = 269/412 (65.29%), Postives = 332/412 (80.58%), Query Frame = 0
Query:    5 SMENTICENDWAVLQSTDGRKVLGNVTKTSTARIGKRKRKISALLGKQWGDTFAVAPDDSLQPVPDVLE-ETPDETDMDTGRTNQYLQDDNENQRLRQAAIQKLKEEGVHGEQLVQTVVKHSSTFENKTPFSQQKYLQRKRAKFDIRVRVLKPTALTLCETYFEKSPEKTLHLRPDALGIVLGYSGVRSGARVLLYENCTGLLTGAVAERLGGIGRVLNVFTGNTPPAIEIVRMLNLGPSGMRTIVHTPIELFSKLDVQEKEDDQPLKYGAKEEDGDSTPPETTHQPSAKRAEAIAQRSRRGMVKGWLREGCDCLIVATRYDVVQVFDTLLKHVAPSGCFAAYCTHLQDAADLQYALQLSKMAIRVELMEVNLVNHQILPGRSHPAMTDSATGGYVVTGIRIVSPNEEQSED 415
            S +  I E++W VL +TDG+KVLG+V++ S+ARIGKRKRKI ALLG +WGD FAV   D L+PV +        ET+M T R NQYL+D NENQ+L Q+ I  +KE+G+ GEQLV+TVV++S TF  KT FSQ+KY++RKRAKFD++VRVL+PTALTLCETYFE+SPEKT+HLRPD L I+LGY+GVRSG R L+YENCTGL+T AVAER+ G+G+V+N+F+G TPP  E++RMLNL     + IVHTPIEL   +DV + ED+ PL+Y    ED  +    T H PSA+RAEAIA R++RG VK W+R+GCDCLIVATR+DVVQVFD LLKH+APSGCFAAYC HLQDAADLQYALQLSKMA+RVEL+EV+LVNHQ+LPGRSHPAMTDSATGGY+V+G+RI  P+   S D
Sbjct:    2 SPDEQIQEDNWVVLSATDGKKVLGHVSRNSSARIGKRKRKIGALLGARWGDLFAVRSGDRLEPVEEEQSFNVTAETEMGTERNNQYLEDTNENQKLEQSTILAMKEQGIEGEQLVRTVVENSLTFRGKTAFSQEKYIKRKRAKFDLKVRVLRPTALTLCETYFERSPEKTMHLRPDGLAILLGYAGVRSGCRALVYENCTGLVTAAVAERIDGVGKVINIFSGTTPPGTEVIRMLNLDSLHTKAIVHTPIELLGMVDVSQSEDNDPLRY-VTVEDAITEKTGTKHVPSARRAEAIAMRAKRGDVKSWIRDGCDCLIVATRFDVVQVFDVLLKHLAPSGCFAAYCMHLQDAADLQYALQLSKMAMRVELLEVSLVNHQVLPGRSHPAMTDSATGGYIVSGVRIAMPSAMASSD 412          
BLAST of Ggra1766.t1 vs. uniprot
Match: A0A6T6DBP7 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6DBP7_9RHOD)

HSP 1 Score: 241 bits (614), Expect = 9.500e-73
Identity = 128/327 (39.14%), Postives = 200/327 (61.16%), Query Frame = 0
Query:   96 NQRLRQAAIQKLKEEGVH-GEQLVQTVVKHSSTFENKTPFSQQKYLQRKRAKFDIRVRVLKPTALTLCETYFEKSPEKTLHLRPDALGIVLGYSGVRSGARVLLYENCTGLLTGAVAERLGGIGRVLNVFTGNTPPAIEIVRMLNLGPSGMRTIVHTPIELFSKLDVQEKE-DDQPLKY----------GAKEEDGDSTPPETTHQPS----AKRAEAIAQRSRRGMVKGWLREGCDCLIVATRYDVVQVFDTLLKHVAPSGCFAAYCTHLQDAADLQYAL-QLSKMAIRVELMEVNLVNHQILPGRSHPAMTDSATGGYVVTGIRI 405
            NQ+LR   +++LK    H G  +V+ +   S+TF   T F++ KYL+RK  K  + VR  +P+   +  +Y  ++PEKT+HLRPD LG +L Y+GVR+G   +++EN  GL+ GAVA+R+ G G VLN F+G++PP I+  +M++L P    ++VH P+ +   + + E + D  PL+Y            K++D +     + HQP+    ++ +  +  R  RG  K W+R+GCD LI+ATR+DV  V + LL H+AP G  A + + +Q  A+L + L Q   +  RVEL+E+NL  HQILPGRSHP MTD   GGY+++ +++
Sbjct:   25 NQKLRAEDVKRLKR--THDGALVVRALAAASTTFSGMTEFARCKYLRRKSEKHAVTVRACRPSPAKIAHSYLMRAPEKTMHLRPDLLGALLTYAGVRAGTISMVFENTNGLVCGAVADRIQGHGVVLNGFSGSSPPGIDCAKMMDLDPMAFASVVHFPLSILDVIHIDEPQVDSMPLRYEQLNPDRESIDQKDQDAEKHTAPSEHQPAPDDNSRLSYLLETRPSRGQFKSWVRKGCDSLIIATRHDVFDVMERLLPHLAPGGSIAVFSSSIQRLAELHHTLCQRGDLVKRVELIELNLTEHQILPGRSHPNMTDYGAGGYILSAMKV 349          
BLAST of Ggra1766.t1 vs. uniprot
Match: A0A5J4YQR8 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQR8_PORPP)

HSP 1 Score: 214 bits (544), Expect = 2.200e-61
Identity = 124/429 (28.90%), Postives = 222/429 (51.75%), Query Frame = 0
Query:    2 GSASMENTICENDWAVLQSTDGRKVLGNVTKTSTARIGKRKRKISALLGKQWGDTFA--------------VAPDDSLQPVPDVLEETPDETDMDTGRTNQYLQDDNENQRLRQAAIQKLKEEGVHGEQLVQTVVKHSSTFENKTPFSQQKYLQRKRAKFDIRVRVLKPTALTLCETYFEKSPEKTLHLRPDALGIVLGYSGVRSGARVLLYENCTGLLTGAVAERLGGIGRVLNVFTGNTPPAIEIVRMLNLGPSGMRTIVHTPIELFSKLDVQEKEDDQPLKYG-AKEEDGDSTPPETTHQPSAKRAEAI--------AQRSRRGMVKGWLREGCDCLIVATRYDVVQVFDTLLKHVAPSGCFAAYCTHLQDAADLQYALQLSKMAIRVELMEVNLVNHQILPGRSHPAMTDSATGGYVVTGIRIVS 407
            G+   ++ + + D+ V  ++D R     V + +   +  ++ K+ A++G +WG  F+              V+ D  L  + + L    +  +          + D E + +R+    +  +  +    L++  V+ +  FE K+  +++K++ RK A+  +RVR+LKPT  TLC  Y +++P   L +R D   +VL  + VR+    ++ ++  GLL G+VA+R+ G G+V +VF G+TP  +E++R  NL      +I H PI     +     +DD PL +  A+ + G +T  E   +   KRA  +          R     +K WLR GC+ LI+A R+D + +   +L  +A SG    +  + Q  A+LQYAL  ++   R++L E +LV+HQ+LPGRSHP M++ A+GGYV++  ++ +
Sbjct:    4 GADGTDSVVRDGDYVVFHTSDDRWNFAQVKRGNRVSLNSKRLKVDAVIGCEWGSVFSLGRNKAELIREIETVSFDTELHQLSEELHTVSNGAEARDENEGAEAEIDEELEVVREDRHDEAGKVSLKSADLIELAVRSNVNFEGKSLHARKKFIMRKHARLLLRVRILKPTGRTLCNVYCDRNPHGILGMRLDTFSLVLTLANVRADGHYMVMDHALGLLVGSVAQRMRGHGKVFSVFQGSTPACVEMIRSFNLSAEETNSIRHVPIHFLPSVFQDAPDDDLPLNFATARRDPGSATDQE--QRSDVKRARLLDGSHPSRLTGRPTARRMKYWLRAGCESLIIAARHDALPLVHAMLPFLASSGNLVVFGNNFQPMAELQYALSCTRSFARIQLHETSLVHHQVLPGRSHPKMSELASGGYVLSATKLTA 430          
BLAST of Ggra1766.t1 vs. uniprot
Match: A0A6J1KL25 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1KL25_CUCMA)

HSP 1 Score: 209 bits (532), Expect = 1.780e-59
Identity = 139/415 (33.49%), Postives = 220/415 (53.01%), Query Frame = 0
Query:   17 VLQSTDG-RKVLGNVTKTSTARIGKRKRKISALLGKQWGDTFAVAPDDSLQPVPDVLEETPDETD--------MDTGRTNQYLQDDNENQRLRQAAIQKLKEEGVHGEQLVQTVVKHSSTFENKTPFSQQKYLQRKRAKFDIRVRVLKPTALTLCETYFEKSPEKTLHLRPDALGIVLGYSGVRSGARVLLYENCTGLLTGAVAERLGGIGRVLNVFTGNTPPAIEIVRMLNLGPSGMRTIVHTPIELFSKLDVQEKEDDQPLKY---GAKEEDGDSTPPETTHQPSAKRAEAIAQ-------------RSRRGMVKGWLREGCDCLIVAT-RYDVVQVFDTLLKHVAPSGCFAAYCTHLQDAADLQYALQLSKMAIRVELMEVNLVNHQILPGRSHPAMTDSATGGYVVTGIRI 405
            +L   DG R V   ++  ST +IG +   +  L+G+ +G  F +   D+ Q +  V     +ET+         D  R N+ L D+N+ Q L    I  ++ +G  G+++V+ ++ +S+TFE KT FSQ+KY  +K+ K+  RV + +P   ++CE YF+K P +   LR DAL ++L ++ V S + VL+++   GL+TGAVAERLGG G V N + G+ P  +EIVRM N        I+ +P+   +   V   E +  +K     ++  + D  PP +T Q S   +E+I               ++   +VK W   G   LI+A  + D   +   LL  VA S  FA Y  +LQ  A   + LQL KMAI +++ E  L  +Q+LP R+HP M  +A GGY+++G +I
Sbjct:   24 LLDINDGDRLVFARLSPASTLKIGNKSYSLKPLIGRPFGSLFQIESGDNGQHLACVTPSREEETEEMKEEQVVKDELRDNRALVDNNKAQSLSSEDIDAMRSQGATGDEIVEALIANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEAYFKKFPARIGFLRVDALSLLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKGSVCNAYLGSNPNPMEIVRMFNFDDEICARIMRSPLTDLASSQVSNGEHEVNIKAQDEASEPVNMDEGPPPSTDQSSGLNSESIVSPLTKVLKCAKAGDKAPPEVVKSWKENGFTSLIIAAPQSDAWGLVKDLLPLVANSAPFAIYHQYLQPLATCMHKLQLEKMAISLQISEPWLREYQVLPSRTHPFMQMNAFGGYILSGTKI 438          
BLAST of Ggra1766.t1 vs. uniprot
Match: I0Z706 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z706_COCSC)

HSP 1 Score: 207 bits (528), Expect = 1.330e-58
Identity = 149/467 (31.91%), Postives = 230/467 (49.25%), Query Frame = 0
Query:   10 ICENDWAVLQSTDGRKVLGNVTKTSTARIGKRKRKISALLGKQWGDTFAVAPDDSLQPVPDVLEETPDETDMDTGRTNQYLQDDNE--------NQRLRQAAIQKLKEEGVHGEQLVQTVVKHSSTFENKTPFSQQKYLQRKRAKFDIRVRVLKPTALTLCETYFEKSPEKTLHLRPDALGIVLGYSGVRSGARVLLYENCTGLLTGAVAERLGGIGRVLNVFTGNTPPAIEIVRMLNLGPSGMRTIVHTPIELF-----------------------SKLDVQEKEDDQPLKYGAKEE---------DGDSTPPE--------------TTHQPSAKRAEAIAQRSRRG-------------MVKGWLREGCDCLIVAT-RYDVVQVFDTLLKHVAPSGCFAAYCTHLQDAADLQYALQLSKMAIRVELMEVNLVNHQILPGRSHPAMTDSATGGYVVTGIRIVSP 408
            I E D AVL   +  K+   V   S  +IGK    +  L+G+ +G  FA+A D           E  D T  D    N  +  +N         +Q L+ A I+ ++E G+ GE +V+ ++ +S T+E+KT F+Q KY +RK  K+  +  +++PTA ++ E YF KSP+K   LR D+L ++L  + + S ARVL+ E C GL+TGAVAERLGG G V++ +TG   P+++IVR  N   S   ++V  PI                          ++   ++ + D P+     E+         +GD+  P               TT       A+ +A+ SR G             +V+   R+G  C I+A  +   + +   +L  +APS  FA +   LQ  AD   ALQ+SK A+ ++L E     HQ+LPGR+HP M  SATGGY++TG ++V+P
Sbjct:    6 IREGDNAVLDINNSHKMFVTVKPGSKVKIGKAMCSLEPLIGQYYGIQFALAADGQTLEFKRPKMERDDGTQKDEWHANGTMDKNNSELLDRGDAHQNLKPADIEAMREAGMGGEAIVEALLANSETYESKTQFAQAKYRKRKADKYMAQATLVRPTARSVAEAYFAKSPQKIQGLRADSLALLLSLANIGSHARVLVIETCGGLVTGAVAERLGGSGLVVSGYTGLRAPSLDIVRQFNFPASSKASMVTAPINALLQCGQPAPAEIPVSAPPESNAAAAEAGAEDTKQDTPMADAGAEQAAEALTPAQEGDAAVPVAGTTTAKAEPVSNGTTGAAEGGVAQTVAE-SRSGHDATSSSTRDLPDIVQQTCRQGFSCCILAAPQVQPLALLRKVLPLLAPSAAFAVFANCLQPLADCMLALQVSKEAVALQLQESWWREHQVLPGRTHPEMMVSATGGYILTGYKVVTP 471          
BLAST of Ggra1766.t1 vs. uniprot
Match: A0A0W8CAK1 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=14 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CAK1_PHYNI)

HSP 1 Score: 207 bits (526), Expect = 2.230e-58
Identity = 140/422 (33.18%), Postives = 220/422 (52.13%), Query Frame = 0
Query:   10 ICENDWAVLQSTDGRKVLGNVTKTSTARIGKRKRKISALLGKQWGDTFA------VAPDDSLQPVPDVLEETPDETDMDTGRTNQYLQDDNENQRLRQAAIQKLKEEGVHGEQLVQTVVKHSSTFENKTPFSQQKYLQRKRAKFDIRVRVLKPTALTLCETYFEKSPEKTLHLRPDALGIVLGYSGVRSGARVLLYENCTGLLTGAVAERLGGIGRVLNVFTGNTPPAIEIVRMLNLGPSGMRTIVHTPIELFSKLDVQEKEDDQPLKYGAKEEDGDSTPPETTHQPSAKRAEAIAQ-------------------RSRRGMVKGWLREGCDCLIVATRYDVVQVFDTLLKHVAPSGCFAAYCTHLQDAADLQYALQLSKMAIRVELMEVNLVNHQILPGRSHPAMTDSATGGYVVTGIRIV 406
            I E D  + Q++DGR     V K  + R+GK+   +  ++G  +G  F       V     L P P V  ET D    D    N++  D N  Q L+Q  I +L+E+G  G++++Q +V++SST+E KT FS+QKYL++K+ K+  RVR L+ TA +LC TY  K+P K  +LR D+LG +L Y  + +G +VL+ + C GL+TGA+AER GG GR++  + G  P A +I+R  N     + +I + P +    L+++E++  +P K        D   PE   Q +A+RA+                       R +   ++ W RE  D L++A  YD  +V   LL ++  S  F  Y   L+    +          I ++L E     +Q+LPGR+HP M  SA  GY+++GI+I+
Sbjct:   26 IYEGDTVICQTSDGRMFFQAVAKDESIRVGKKVANLKPVIGSFYGAIFEEQNKKLVKVTGGLFPDP-VAPETGDGFVPDGD--NRHYADTNSAQTLKQTDIGELREKGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNPAKICNLREDSLGQILVYGNIFAGGQVLVVDTCMGLVTGAIAERQGGSGRIICPYEGQQPAA-DILRRFNFDKRTLESIHYMPFKQVRLLEMEEEDVVEPAKVAR-----DGLTPEEREQLAAERAKNFTPXXXXRYAEKKARREQTKLFRQKPSTIREWAREKSDSLVIAANYDPEEVLMALLPYLGRSKPFVVYSEFLEKMEAI----------IDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLSGIKIL 428          
BLAST of Ggra1766.t1 vs. uniprot
Match: A0A2D4BY31 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BY31_PYTIN)

HSP 1 Score: 205 bits (522), Expect = 1.620e-57
Identity = 142/420 (33.81%), Postives = 218/420 (51.90%), Query Frame = 0
Query:    8 NTICENDWAVLQSTDGRKVLGNVTKTSTARIGKRKRKISALLGKQWGDTFA------VAPDDSLQPVPDVLEETPDETDMDTGRTNQYLQDDNENQRLRQAAIQKLKEEGVHGEQLVQTVVKHSSTFENKTPFSQQKYLQRKRAKFDIRVRVLKPTALTLCETYFEKSPEKTLHLRPDALGIVLGYSGVRSGARVLLYENCTGLLTGAVAERLGGIGRVLNVFTGNTPPAIEIVRMLNLGPSGMRTIVHTPIELFSKLDVQEK---EDDQPLKYGAKEEDG-----------DSTPPETTHQPSAKRAEAIAQRSRRGMVKGWLREGCDCLIVATRYDVVQVFDTLLKHVAPSGCFAAYCTHLQDAADLQYALQLSKMAIRVELMEVNLVNHQILPGRSHPAMTDSATGGYVVTGIRIVS 407
            N I E D  + +++DGR     V    T R+GK+   +  ++G  +G  F       VA    L P P V  ET +    DT   N    D N  Q+L    I  ++E G  G +++Q +V++S T++ KT FS+QKYL++K+ K+  RVR LK TA +LC TY  K+P K  ++R D+LG +L Y+ + + A+VL+ + C GL+TGA+AER  G+GR++  + G    A +I+R  N   S M +I   P+     L+++E+   E +Q +K    EE+                 E  +   A+RA    QR     V+ W+R   D L++A+ YD   V   LL ++  S  F  Y  +++    L   LQ     I V+L E     HQILPGR+HP M  +A  GY++TG ++V+
Sbjct:   33 NRIYEGDTVICETSDGRIFFQEVKANCTIRVGKKLTPLKPVIGAXYGSIFEEQNKKLVAVSGGLFPDP-VAPETGEFEVPDTDNRN--YTDTNSAQKLSVHDITGMRESGASGREIIQKLVENSETWDAKTEFSKQKYLKKKQQKYMPRVRFLKCTADSLCRTYRAKNPSKICNIREDSLGQILMYANIHAEAQVLVVDTCMGLVTGAIAERQAGLGRIIAGYEGQQLAA-DILRRFNFDKSTMESIHTFPLNSVQYLEMKEEDIPESEQVVKDRLSEEEKLRLEAERVAEYTEEEQEKYYIKKARRAAEKMQRQPATTVREWIRNQSDSLVIASHYDPEPVLLALLPYLKCSRPFVVYXEYMEPLTRLFGKLQQMDSVIDVQLSETWTREHQILPGRTHPEMKMNAFSGYLLTGTKVVN 448          
BLAST of Ggra1766.t1 vs. uniprot
Match: M4C2Z9 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C2Z9_HYAAE)

HSP 1 Score: 206 bits (523), Expect = 1.900e-57
Identity = 141/411 (34.31%), Postives = 216/411 (52.55%), Query Frame = 0
Query:   10 ICENDWAVLQSTDGRKVLGNVTKTSTARIGKRKRKISALLGKQWGDTFAVAPDDSLQPVPDVLEETPDETDMDTGRTNQYLQDDNENQRLRQAAIQKLKEEGVHGEQLVQTVVKHSSTFENKTPFSQQKYLQRKRAKFDIRVRVLKPTALTLCETYFEKSPEKTLHLRPDALGIVLGYSGVRSGARVLLYENCTGLLTGAVAERLGGIGRVLNVFTGNTPPAIEIVRMLNLGPSGMRTIVHTPIELFSKLDVQEKEDDQPLKYG------------AKEEDGDSTPPETTH--QPSAKRAEAIAQRSRRGMVKGWLREGCDCLIVATRYDVVQVFDTLLKHVAPSGCFAAYCTHLQDAADLQYALQLSKMAIRVELMEVNLVNHQILPGRSHPAMTDSATGGYVVTGIRIV 406
            I E D  + Q++DGR     VTK   A   +R +K+  + G  + D   VAP+     VPD                N++  D N  Q L+Q  I  L+E+G  G++++Q +V++SST+E KT FS+QKYL++K+ K+  RVR L+ TA +LC TY  K+P K  +LR D LG +L Y  + +GA+VL+ + C GL+TGAVAER GG GR++  + G  P A +I+R  N     + +I + P +    L ++E+E  +P K              A E   + TP +  H     A+R E      +  +++ W RE  D L++A  Y+   +   LL ++  S  F  Y   L+        LQ  +  I ++L E     +Q+LPGR+HP MT SA  GY++ GI+I+
Sbjct:   41 IYEGDTVICQTSDGRMFFQAVTKDE-ATFEERNKKLVKVTGGLFPDP--VAPETGEGFVPD--------------GDNRHYADTNSAQTLKQTDIGGLREKGASGKEIIQMLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNPSKICNLREDTLGQILVYGNIFAGAQVLVVDTCMGLVTGAVAERQGGSGRLICPYEGQQPSA-DILRRFNFDKLTLESIHYLPFKQVRLLGLKEEEVLEPKKVARDGLSQEQRERLAAERAKNFTPEQQKHYADKKARREETKLSHQKPSVIRQWAREKSDSLVIAANYNPEAILMALLPYLGRSKPFVVYSEFLEPLTRTFARLQKMESIIDLQLNETWTRENQVLPGRTHPEMTMSACSGYLLWGIKIL 433          
BLAST of Ggra1766.t1 vs. uniprot
Match: A0A2D4CD60 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CD60_PYTIN)

HSP 1 Score: 208 bits (530), Expect = 1.120e-55
Identity = 143/420 (34.05%), Postives = 219/420 (52.14%), Query Frame = 0
Query:    8 NTICENDWAVLQSTDGRKVLGNVTKTSTARIGKRKRKISALLGKQWGDTFA------VAPDDSLQPVPDVLEETPDETDMDTGRTNQYLQDDNENQRLRQAAIQKLKEEGVHGEQLVQTVVKHSSTFENKTPFSQQKYLQRKRAKFDIRVRVLKPTALTLCETYFEKSPEKTLHLRPDALGIVLGYSGVRSGARVLLYENCTGLLTGAVAERLGGIGRVLNVFTGNTPPAIEIVRMLNLGPSGMRTIVHTPIELFSKLDVQEK---EDDQPLKYGAKEEDG-----------DSTPPETTHQPSAKRAEAIAQRSRRGMVKGWLREGCDCLIVATRYDVVQVFDTLLKHVAPSGCFAAYCTHLQDAADLQYALQLSKMAIRVELMEVNLVNHQILPGRSHPAMTDSATGGYVVTGIRIVS 407
            N I E D  + +++DGR     V    T R+GK+   +  ++G  +G  F       VA    L P P V  ET +    DT   N    D N  Q+L    I  ++E G  G +++Q +V++S T++ KT FS+QKYL++K+ K+  RVR LK TA +LC TY  K+P K  ++R D+LG +L Y+ + + A+VL+ + C GL+TGA+AER  G+GR++  + G    A +I+R  N   S M +I   P+     L+++E+   E +Q +K    EE+                 E  +   A+RA    QR     V+ W+R   D L++A+ YD   V   LL ++  S  F  YC +++    L   LQ     I V+L E     HQILPGR+HP M  +A  GY++TG ++V+
Sbjct:   67 NRIYEGDTVICETSDGRIFFQEVKANCTIRVGKKLTPLKPVIGAFYGSIFEEQNKKLVAVSGGLFPDP-VAPETGEFEVPDTDNRN--YTDTNSAQKLSVHDITGMRESGASGREIIQKLVENSETWDAKTEFSKQKYLKKKQQKYMPRVRFLKCTADSLCRTYRAKNPSKICNIREDSLGQILMYANIHAEAQVLVVDTCMGLVTGAIAERQAGLGRIIAGYEGQQLAA-DILRRFNFDKSTMESIHTFPLNSVQYLEMKEEDIPESEQVVKDRLSEEEKLRLEAERVAEYTEEEQEKYYIKKARRAAEKMQRQPATTVREWIRNQSDSLVIASHYDPEPVLLALLPYLKCSRPFVVYCEYMEPLTRLFGKLQQMDSVIDVQLSETWTREHQILPGRTHPEMKMNAFSGYLLTGTKVVN 482          
The following BLAST results are available for this feature:
BLAST of Ggra1766.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMQ68.100e-23078.04tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
R7QJI52.760e-19065.29tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A6T6DBP79.500e-7339.14tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A5J4YQR82.200e-6128.90tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A6J1KL251.780e-5933.49tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
I0Z7061.330e-5831.91tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A0W8CAK12.230e-5833.18tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A2D4BY311.620e-5733.81tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
M4C2Z91.900e-5734.31tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A2D4CD601.120e-5534.05tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017423tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6PFAMPF04189Gcd10pcoord: 9..271
e-value: 3.1E-50
score: 171.0
IPR017423tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6PANTHERPTHR12945TRANSLATION INITIATION FACTOR EIF3-RELATEDcoord: 6..412
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:572754..574013 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1766.t1Ggra1766.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 572754..574013 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1766.t1 ID=Ggra1766.t1|Name=Ggra1766.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=420bp
MGSASMENTICENDWAVLQSTDGRKVLGNVTKTSTARIGKRKRKISALLG
KQWGDTFAVAPDDSLQPVPDVLEETPDETDMDTGRTNQYLQDDNENQRLR
QAAIQKLKEEGVHGEQLVQTVVKHSSTFENKTPFSQQKYLQRKRAKFDIR
VRVLKPTALTLCETYFEKSPEKTLHLRPDALGIVLGYSGVRSGARVLLYE
NCTGLLTGAVAERLGGIGRVLNVFTGNTPPAIEIVRMLNLGPSGMRTIVH
TPIELFSKLDVQEKEDDQPLKYGAKEEDGDSTPPETTHQPSAKRAEAIAQ
RSRRGMVKGWLREGCDCLIVATRYDVVQVFDTLLKHVAPSGCFAAYCTHL
QDAADLQYALQLSKMAIRVELMEVNLVNHQILPGRSHPAMTDSATGGYVV
TGIRIVSPNEEQSEDYSSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017423TRM6