Ggra1857.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1857.t1
Unique NameGgra1857.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length804
Homology
BLAST of Ggra1857.t1 vs. uniprot
Match: A0A2V3ISM6 (C2 NT-type domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISM6_9FLOR)

HSP 1 Score: 818 bits (2112), Expect = 1.910e-286
Identity = 510/809 (63.04%), Postives = 632/809 (78.12%), Query Frame = 0
Query:    1 MKRVGNRSAQIVRSASRRGKTSSRFQFDITIDRVFGT-KPGLNYQVKWSRGVKVASTKSQLSSKETAKSGLVFNEKLSLLVTLYKEDGKKFDLKDAKLALIAINQKSQIRTAAKIHFDLSQFAGVPSSSVQKLLKLSDKISVKLTIDSRFLKSGGKGXXXXXXXXXXXXXXXXXXXXXXXXXX---LAVDDIPEPEVVTASSVRSKRAQPISRQPVPVIKQSASQPSPPAXXXXXXXXXXXXXXXXXXXXXXXVAAASSARRARPGTVRQEDINAFREVEEQAKLSDLINENKRLSSDLQQANTERSSLEQSHKRQIDELNAQMQLHANKVSSAESKRSSSEAAVSDLRANNEELNRKISELTSELDSVKRSRDQYQVKSRKLNATEQKCRDLSREVDRLTIAVSQSASSPTSTKSNSEVEERLSALRKEKEDLEGRIKVHEAHALKVKDAYQSLTTMYNKVRDDNIKIAKKVEQQEKELRSRPALPVTSRSTSQDDGEEIRSRLEDALQQVRDEQSSKDSLQSDYDRLSQQNRVLEDRCAKTAKELEDSREETKGVYASLEELKSQRDAAMKRASHDGKALSAEILKNESVAHAEEEKRHLKERFEKEQNRLSNKSEELENAIMVLKEDIEYEKGEKLKAREERDKLREHARQLERKTSQAAKQADELHSIRRQLSTQQMRDKDQTDMITDLQGQVKQLQKELE--HMKDLDKPSSSIEDFGEVLQDLVAAKLALAQAEDDKLNLQFSMKKLRKTERMTQQRLAAHASRLEVKLGQATEELEKYRKDKKLGKGLGAREFNELDSDIDY 803
            MKRVGN+SAQ+VRSASRRGK+S RFQFDI +DRV G  KPG  YQVKWSRGVKVA+T   L++KE+AK+G+  NEKLSLLVTLYK+D  KFD KDAKLAL+ INQK+QIRT  KIHFDLS FAGVP++SVQ+L KLSDK+S+K T++SRFLK+GGKG       XXXXXXXXXXXXXXXXXXX   LAVDD+PEPEVVTAS+VRSKRA P ++      +  A       XXXXXX                   + SS  R RPGTVRQED++AFR  EE+AKL+ ++ EN+RLS++LQQA  ER SLEQSHKRQIDELN Q+Q+   +VS +E++RSSS A ++ LR+ N +L +++  LT ELDSVKRSRD+Y+ +S+ L+ TE+KCR+L+REVDRLT+  +QS+SS  + K NS++EER+ +LRKEKE LE RIK HE+H+ KVK+AY+SL  MYNKVRD+NIK++ +VE+QEK+L+ R      S S +Q D EE+R+RLEDALQ+VRDE++SKDSLQSD DR++QQ R +E R  KTA+EL++SREE   + A++E LK+QRD A+K AS  GK  +    +    + ++EE R L ++ EKEQ R   K EELEN ++VLKED+EYEK EK+KAR++RDKLR+ AR LERKTSQAAKQADELH++RRQLST QMR+KDQ +MI DL+GQVKQLQ E++  ++++  K SSS+ED  EVLQDLVA KLALAQAEDDKL LQFSM+KLRK+ERM QQRLAAHASRLEVKLGQA EELEKYRK+KK GK LG REFNELDSDIDY
Sbjct:    1 MKRVGNKSAQLVRSASRRGKSSFRFQFDIIVDRVQGAIKPGFKYQVKWSRGVKVATTTPILATKESAKAGIHVNEKLSLLVTLYKDDSNKFDTKDAKLALVTINQKNQIRTVGKIHFDLSHFAGVPTASVQRLFKLSDKLSMKTTVESRFLKAGGKGPGSGASSXXXXXXXXXXXXXXXXXXXXXDLAVDDVPEPEVVTASAVRSKRAPPPAKPAAKPEQSPADVQXXXXXXXXXXGQSPSPAPRKPEGPPSTKGSTSSQSRPRPGTVRQEDVSAFRRAEEEAKLAQVVKENERLSTELQQAKNERKSLEQSHKRQIDELNDQLQVRHREVSDSEARRSSSVAELTTLRSANGDLKQRLDSLTKELDSVKRSRDEYRTRSKSLSGTEEKCRELAREVDRLTVVAAQSSSSTGADKDNSKIEERMLSLRKEKESLEKRIKDHESHSRKVKEAYESLAKMYNKVRDENIKLSSRVEEQEKDLQVRSVSVSASSSVTQVDTEELRARLEDALQEVRDEKASKDSLQSDLDRMNQQLRSMERRVQKTAEELKESREEVSKLNATIESLKTQRDNALKEASGGGKGPTM-APRAIGPSQSDEEVRALMQKLEKEQARFQQKREELENELIVLKEDVEYEKAEKVKARDDRDKLRDRARTLERKTSQAAKQADELHALRRQLSTVQMREKDQXEMINDLRGQVKQLQSEVDDVNVRERSKQSSSVEDVEEVLQDLVATKLALAQAEDDKLQLQFSMRKLRKSERMAQQRLAAHASRLEVKLGQANEELEKYRKEKKGGKVLGTREFNELDSDIDY 808          
BLAST of Ggra1857.t1 vs. uniprot
Match: R7QVB4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QVB4_CHOCR)

HSP 1 Score: 271 bits (692), Expect = 1.690e-78
Identity = 200/496 (40.32%), Postives = 297/496 (59.88%), Query Frame = 0
Query:  318 AQMQLHANKVSSAESKRSSSEAAVSDLRANNEELNRKISELTSELDSVKRSRDQYQVKSRKLNATEQKCRDLSREVDRLTIAVSQSASS-------PTSTKSNSEVEERLSALRKEKEDLEGRIKVHEAHALKVKDAYQSLTTMYNKVRDDNIKIAKKVEQQEKELRSRPALPVTSRSTSQDDGEEIRSRLEDALQQVRDEQSSKDSLQSDYDRLSQQNRVLEDRCAKTAKELEDSREETKGVYASLEELKSQRDAAMKRASHDGKALSA-EILKNESVAHAEEEKRHLKERFEKEQNRLSNKSEELENAIMVLKEDIEYEKGEKLKAREERDKLREHARQLERKTSQAAKQADELHSIRRQLSTQQMRDKDQTDMITDLQGQVKQLQKELEHMKDL--DKPSSSIEDFGEVLQDLVAAKLALAQAEDDKLNLQFSMKKLRKTERMTQQRLAAHASRLEVKLGQATEELEKYRKDKKLGKGLGAREFNELDSDIDY 803
            A+++ H+ + +S +++R+ ++A+   L      L+  +  + +EL +VK  RD+   +++ L   E+K R LS EVDRLT+A + + +               S+ E+RL+ +R+EK+ L+ ++K HEAH+ KV++ YQ L+ MYN +R+ N  +  +V+Q    +++       S +  +DD   + S                                   R   T   LEDS+ E   +Y    ELK+QRD AM+RA   GK+++A E   + SV   EEE R  +E+ ++EQ RL  +  ELE  +  L+EDIEYEK EK+K R ERD  R +AR LERKTS AAKQ+D + S++RQ+ST QMR +D   MIT+L+ +V +L+ EL  +K    D+ SS+ E+ G+VLQDLV  KLALAQAEDDKLNLQFS+K+ +K+E++TQQRLA HASRLEV+LG+A EELEK R+ ++L     A E NE+ SD+DY
Sbjct:    3 AELRAHSRQAASEDARRAKADASARGLSDETARLHADLKVIAAELATVKGKRDRLVKENKALQVVEEKNRSLSLEVDRLTVAAAAATNGVGGQVVGARGLPDGSQFEKRLTEVRQEKDALQKKLKAHEAHSTKVRETYQKLSQMYNDLREHNAALQSEVDQ----IKANKDEQNESDAGERDD---LLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRNTTGHLEDSQAEVDALYEESVELKAQRDMAMQRALSRGKSMAAGEQAASRSVDKVEEELRVSREKSDREQTRLMRRVAELEQEVADLREDIEYEKAEKIKTRAERDNFRNNARTLERKTSVAAKQSDAMSSLKRQISTHQMRQQDHESMITELKSEVGRLEAELTDVKGAFNDRRSSNAEELGDVLQDLVMTKLALAQAEDDKLNLQFSIKERKKSEKVTQQRLAEHASRLEVELGEANEELEKLRRQQQLE---DATELNEVGSDVDY 488          
BLAST of Ggra1857.t1 vs. uniprot
Match: A0A1X6NNC6 (C2 NT-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNC6_PORUM)

HSP 1 Score: 132 bits (333), Expect = 3.800e-28
Identity = 73/154 (47.40%), Postives = 105/154 (68.18%), Query Frame = 0
Query:    8 SAQIVRSASRRGKTSSRFQFDITIDRVFGTKPGLNYQVKWSRGVKVASTKSQLSSKETAKSG---LVFNEKLSLLVTLYKEDG----KKFDLKDAKLALIAIN--QKSQIRTAAKIHFDLSQFAGVPSSSVQKLLKLSDKISVKLTIDSRFLKS 152
            ++++ RS S RGK++S+FQFD+T+  V G K G  Y +KWSRG+KVASTK +   K  AK G     FNEKLSLL TL+++ G      F+ K+AKL+LI++   +K   +T AK HF+L+ FAGVPS+S +K+  LS+K+SV   +D +FL +
Sbjct:    5 ASRVRRSVSHRGKSASKFQFDVTVASVTGVKEGNTYFIKWSRGLKVASTKPRTVDKGAAKKGGPGQPFNEKLSLLCTLFRDGGIAKSTSFEEKEAKLSLISVTPGKKGSEKTVAKTHFNLAAFAGVPSASERKVFSLSEKVSVTAVVDCKFLSN 158          
BLAST of Ggra1857.t1 vs. uniprot
Match: A0A1X6PI54 (C2 NT-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PI54_PORUM)

HSP 1 Score: 130 bits (327), Expect = 1.560e-27
Identity = 71/147 (48.30%), Postives = 103/147 (70.07%), Query Frame = 0
Query:   15 ASRRGKTSSRFQFDITIDRVFGTKPGLNYQVKWSRGVKVASTKSQLSSKETAKSGLVF-NEKLSLLVTLYKE-DGKKFDLKDAKLALIAIN--QKSQIRTAAKIHFDLSQFAGVPSSSVQKLLKLSDKISVKLTIDSRFLK-SGGKG 156
            AS RGK+ S+FQFD+T+  V G K G  Y VKW+RG KVASTK   +   +A  G  + ++KLSLLVTL++  DG  FD+KDAKLAL+++N  ++   +T AK+HF+L+ +AGVPS++    L LS+++ +KLT+  +F+K S G G
Sbjct:    8 ASHRGKSGSKFQFDVTVHDVSGLKAGNTYLVKWTRGAKVASTKPLTAEGPSASRGTGWASDKLSLLVTLFRPPDGANFDVKDAKLALVSVNPAKRGSEKTVAKVHFNLADYAGVPSATATTRLALSERVGIKLTVACKFMKVSSGPG 154          
BLAST of Ggra1857.t1 vs. uniprot
Match: A0A7S1XAB7 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XAB7_9RHOD)

HSP 1 Score: 120 bits (301), Expect = 2.900e-24
Identity = 64/139 (46.04%), Postives = 96/139 (69.06%), Query Frame = 0
Query:   19 GKTSSRFQFDITIDRVFGTKPGLNYQVKWSRGVKVASTKSQLSSKETAKSGLVFNEKLSLLVTLYKED-GKKFDLKDAKLALIAINQKSQIRTAAKIHFDLSQFAGVPSSSVQKLLKLSDKISVKLTIDSRFLKSGGKG 156
            GKT S+FQFD+ ++ V G K   +Y VKW+RGVKVA+TK +  +   AK  LV  +KL+LL TLY+ D    FD KDAK++L++I Q ++  +  KIHF+L+Q++GVPS++ +K LKLS+   V++TI   ++ +G  G
Sbjct:   40 GKTGSKFQFDVIVEAVHGLKEAGDYAVKWTRGVKVATTKPRSYAPRAAKEALVMQQKLTLLCTLYRADPNSPFDEKDAKISLVSI-QNAKETSLGKIHFNLAQYSGVPSATQRKGLKLSNDYVVQVTIICSYMGTGASG 177          
BLAST of Ggra1857.t1 vs. uniprot
Match: A0A5J4Z7S4 (C2 NT-type domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7S4_PORPP)

HSP 1 Score: 119 bits (298), Expect = 7.470e-24
Identity = 65/152 (42.76%), Postives = 97/152 (63.82%), Query Frame = 0
Query:    3 RVGNRSAQIVRSASRRGKTSSRFQFDITIDRVFGTKPGLNYQVKWSRGVKVASTKSQLSSKETAKSGLVFNEKLSLLVTLYKEDGKKFDLKDAKLALIAI----NQKSQIRTAAKIHFDLSQFAGVPSSSVQKLLKLSDKISVKLTIDSRFL 150
            R G  S++ + +A R GKT ++FQF++ +  V G KPG  Y VKW+RG+KVASTK     + TA       EKL+L+ T++ +D   FD KDAKL+++ +    N  ++ +T AKIHF+LS+F GVPS+S  +  +LSD + VK T+   F+
Sbjct:   18 RFGGASSKALNNAKRIGKTQAKFQFEVNVHDVSGLKPGGKYFVKWTRGLKVASTKM---FRCTASVSQKVGEKLALMCTMFFDDQNNFDEKDAKLSVVRLTLDANGIAEEKTIAKIHFNLSEFCGVPSASADRTFELSDTVKVKCTVSCTFM 166          
The following BLAST results are available for this feature:
BLAST of Ggra1857.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3ISM61.910e-28663.04C2 NT-type domain-containing protein n=1 Tax=Graci... [more]
R7QVB41.690e-7840.32Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NNC63.800e-2847.40C2 NT-type domain-containing protein n=1 Tax=Porph... [more]
A0A1X6PI541.560e-2748.30C2 NT-type domain-containing protein n=1 Tax=Porph... [more]
A0A7S1XAB72.900e-2446.04Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4Z7S47.470e-2442.76C2 NT-type domain-containing protein n=1 Tax=Porph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 762..782
NoneNo IPR availableCOILSCoilCoilcoord: 588..664
NoneNo IPR availableCOILSCoilCoilcoord: 730..750
NoneNo IPR availableCOILSCoilCoilcoord: 686..706
NoneNo IPR availableCOILSCoilCoilcoord: 455..475
NoneNo IPR availableCOILSCoilCoilcoord: 501..560
NoneNo IPR availableCOILSCoilCoilcoord: 413..440
NoneNo IPR availableCOILSCoilCoilcoord: 281..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 640..670
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..354
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 466..526
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 491..518
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..284
NoneNo IPR availablePANTHERPTHR34491A-TYPE INCLUSION PROTEIN, PUTATIVE-RELATEDcoord: 108..779
IPR019448NT-type C2 domainPROSITEPS51840C2_NTcoord: 15..151
score: 20.019777

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:961820..964329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1857.t1Ggra1857.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 961820..964329 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1857.t1 ID=Ggra1857.t1|Name=Ggra1857.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=804bp
MKRVGNRSAQIVRSASRRGKTSSRFQFDITIDRVFGTKPGLNYQVKWSRG
VKVASTKSQLSSKETAKSGLVFNEKLSLLVTLYKEDGKKFDLKDAKLALI
AINQKSQIRTAAKIHFDLSQFAGVPSSSVQKLLKLSDKISVKLTIDSRFL
KSGGKGAGSAASSALSGVSARSSDDFDDDFDDLAVDDIPEPEVVTASSVR
SKRAQPISRQPVPVIKQSASQPSPPAVPAPKPPSPAPSPPSVRAAEPPPV
AAASSARRARPGTVRQEDINAFREVEEQAKLSDLINENKRLSSDLQQANT
ERSSLEQSHKRQIDELNAQMQLHANKVSSAESKRSSSEAAVSDLRANNEE
LNRKISELTSELDSVKRSRDQYQVKSRKLNATEQKCRDLSREVDRLTIAV
SQSASSPTSTKSNSEVEERLSALRKEKEDLEGRIKVHEAHALKVKDAYQS
LTTMYNKVRDDNIKIAKKVEQQEKELRSRPALPVTSRSTSQDDGEEIRSR
LEDALQQVRDEQSSKDSLQSDYDRLSQQNRVLEDRCAKTAKELEDSREET
KGVYASLEELKSQRDAAMKRASHDGKALSAEILKNESVAHAEEEKRHLKE
RFEKEQNRLSNKSEELENAIMVLKEDIEYEKGEKLKAREERDKLREHARQ
LERKTSQAAKQADELHSIRRQLSTQQMRDKDQTDMITDLQGQVKQLQKEL
EHMKDLDKPSSSIEDFGEVLQDLVAAKLALAQAEDDKLNLQFSMKKLRKT
ERMTQQRLAAHASRLEVKLGQATEELEKYRKDKKLGKGLGAREFNELDSD
IDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019448NT-C2