Ggra1861.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1861.t1
Unique NameGgra1861.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1197
Homology
BLAST of Ggra1861.t1 vs. uniprot
Match: A0A2V3ISJ7 (Reticulocyte-binding protein 2-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISJ7_9FLOR)

HSP 1 Score: 347 bits (890), Expect = 1.610e-99
Identity = 340/699 (48.64%), Postives = 417/699 (59.66%), Query Frame = 0
Query:  523 PAPEQVRPSRIPRKPSRIVVDNSGKIDNSSLNALSRI----MNTKPVDNTDTQIRKSTQKFTTPRTTKLFKPNNNIYSLQQNGNVSPVQQFSSSNRSSVLSHTPGAEAPFKRQSPVVSRQHKLESLNKQLESFQSSKTTGLQGPELQMAELRNGRTGAHVLGDLANSNVSQVMREGENVFRSARERTLKLAETHVKDTSKVDIWSMRAKGAKTTPSREKLRARERSKSKSAFRSQLKEIMTGKACSAEDDVQAENGFN--SSGSRLLESSGHRDSMVEPAVSDSGEETVSINRFKDGETSSFAMESKEVAAS----PQNA-----QSSAVEKSSLRSETHDACSGANDSETGKDFGSGPAVASFSNTKM------EEVLDIERVPVAN--APLTNLMTSLVSFLPGTSSLLGARPTREQSEE-TEAEAAAKRQKLDIERREAEVQARREAQRLLKQKETEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVLEKRAQNEMKLKRKKKGIEPLPSRKVPKGISGKSGIASQGA---SHSPDTGLPGYKKRKLSGTP-STPVTKKSDTCHGQSNYDMTPAQETVFELSDEEEERRKHKQIPQWAQGPTLSTAARAQPDPDNVFVNVPTCDLREVFGNVRRFRPRSSSANWARDRVTAQEMVKFRRGQTAFNE 1193
            P P++ R +       RIVVD  GK+D  SL  LS+I    +NT  ++    +     ++  TPRTTKLF PN+NIY+L +    S VQ++++S+RSS+LSHTPGA+ PFK  S   S   KL SLN++ E  + S+    +    +  E  N  TG     D  N               S + R L  AET        D   +   G KT P REK R R  +K KSA R++++EIMTGK+ +      A +     S    +L + G   S++     ++ +E      +  G+ +S     K+ A      P N      Q +A    +LR       S      T +D     +V   +N K+       E  + E     +  APL NLMTSL SF+PG  S LG+RP R++SEE +EAEA AKRQKLD+ERREAE+QARREAQRLLKQKETEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VLEKRAQN+ K KR KKG+E    RK+ K  S K      G     H  +         K +G P  TPV KK D+  G S Y MTPAQETV E SDEEEERRKHKQIP+WAQG  LSTAARAQPDPD VFVNVPTCDLREVFGN RRFR R+SSANW +DRVT+QEM++FR+ Q AFN+
Sbjct:  232 PVPKETRTAS-----KRIVVDRDGKVDQESLGILSKIAANAVNTT-LEREKPRREPPPEQSQTPRTTKLFNPNSNIYALPRPSASSSVQRYTASSRSSMLSHTPGAQLPFKPVSNETSFGEKLASLNERFELLKKSQPDESRPGNYRSDEELNITTGLRTAEDHRNE------------MASVQRRVLTFAET--------DERPLAQHGMKTEPVREKQRTRFNAKPKSALRAKVEEIMTGKSNNLVSTPTASSAATIPSFSHSVLPTYGKSKSLLGSLKPETLDEP-----YSTGQPASQLEPEKDFANGIGDGPGNISVPAEQQTANNLPALRIPAARHSSHTTRESTSEDKHQEQSVLPTANEKVVDRGVSTETREFEEAESQDKKAPLGNLMTSLTSFIPGACSFLGSRPVRDRSEEESEAEATAKRQKLDMERREAELQARREAQRLLKQKETEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVLEKRAQNQAKQKRTKKGLEAGGVRKIVKDGSSKVASTQMGGVEQGHGEEVVDLSVGGEKGTGGPLQTPVRKKVDSNTGPSTYMMTPAQETVLEHSDEEEERRKHKQIPRWAQGRKLSTAARAQPDPDEVFVNVPTCDLREVFGNARRFRARTSSANWTKDRVTSQEMMRFRKEQAAFND 899          
BLAST of Ggra1861.t1 vs. uniprot
Match: R7QUB6 (INCENP_ARK-bind domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUB6_CHOCR)

HSP 1 Score: 87.8 bits (216), Expect = 1.090e-13
Identity = 139/335 (41.49%), Postives = 183/335 (54.63%), Query Frame = 0
Query:  883 ERVPVANAPLTNLMTSLVSFLPGTSSLLGARPTREQSEETEAEAAAKRQKLDIERREAEVQARREAQRLLKQKETEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVLEKRAQNEMKLKRKKKG------IEPLPSRKVPK-GISGKSGIASQ----GASHS--PDTGLPGYKKRKLSGT---PSTPVTKKSDTCHGQSNYDMTPAQETV-FELSDEEEERRKHKQIPQWA-QGPTLSTAARAQPDPDNVFVN-VPTCDLREVFG----NVRRFRPRSSSANWARDRVTAQEMVKFRRGQTAFNEH 1194
            E V VA+ PLTNL++S+ SFLP  +         E+    EA  A KR + D+ERREAE+ ARREAQR  KQKE +                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VL+++ Q +   +RK+        +  LP  K+ + G +G      Q    G  HS  P TG     K   + +   P TP  +K +    +  + MT  +    FE S EE +RR++K +P WA +   L T    + DPD +F    P+C+L  VF       R++R R  S +W RDR+TAQE + ++R Q  F E+
Sbjct: 1035 ENVIVAS-PLTNLVSSVSSFLPTPNEFSKEHKPEEKRASFEARQALKRHQQDMERREAEILARREAQRTAKQKEIDDKQRKAEKRRRLLAEAEKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLDQKKQIDKAAQRKEADAKRYGKLSKLPRPKLGQHGTTGNQFKQKQQQRPGHLHSRLPPTGSSRVPKMVSADSVPPPRTPQVEKRNREAEEPQWVMTAERHADGFETSVEERKRRRNKTVPSWAGKQALLHTLQAEKSDPDTLFARGAPSCNLETVFDVDEEKKRKYRSRDESGDWTRDRLTAQEEMHYKR-QAGFFEN 1367          
BLAST of Ggra1861.t1 vs. uniprot
Match: A0A5J4YPP1 (Inner centromere protein-related protein pic1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YPP1_PORPP)

HSP 1 Score: 66.2 bits (160), Expect = 4.510e-7
Identity = 43/123 (34.96%), Postives = 62/123 (50.41%), Query Frame = 0
Query: 1079 PSTPVTKKSDTCH--GQSNYDMTPAQETVFELSDEEE-------ERRKHKQIPQWAQGPTLSTAARAQP--DPDNVFVNVPTCDLREVFGNVR----RFRPRSSSANWARDRVTAQEMVKFRR 1186
            P TP        H     +YDMT  +   +  +D E          R  K IP WA+G  L  A   Q   DPD++F  + TC+L EVF  V+    R+R R+S+ NW RDR+T QE +++++
Sbjct: 1727 PKTPPALIKPAAHEPNPESYDMTAERNEGYSDTDNESGDDSTGRRGRPKKPIPGWAKGDQLLEALERQRFVDPDSIFPRMYTCNLEEVFAAVKEKKKRYRARTSTGNWVRDRLTWQEEMEYKK 1849          
BLAST of Ggra1861.t1 vs. uniprot
Match: A0A1Z5JK76 (SAP domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JK76_FISSO)

HSP 1 Score: 64.7 bits (156), Expect = 8.230e-7
Identity = 35/97 (36.08%), Postives = 53/97 (54.64%), Query Frame = 0
Query: 1096 YDMTPAQETVFELSDEEEERRKHKQIPQWAQGPTLSTAARAQP-----DPDNVFVNVPTCDLREVFGNVR-RFRPRSSSANWARDRVTAQEMVKFRR 1186
            Y+++  ++T  E   ++E  +  K+IP WA    L    + Q      DPD +F  V TCDL  +F N R RF+ R+SS NW +DR T  E + ++R
Sbjct:  455 YEISDKEDTDSESESDDECNKNSKKIPAWAGSQKLQEKLKKQLQPGGIDPDEIFGEVETCDLVAIFDNPRTRFKKRTSSGNWGKDRATMAEKLAYKR 551          
BLAST of Ggra1861.t1 vs. uniprot
Match: A0A0F7SRH5 (Inner centromere protein, ARK-binding domain n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SRH5_PHARH)

HSP 1 Score: 63.5 bits (153), Expect = 2.760e-6
Identity = 33/97 (34.02%), Postives = 56/97 (57.73%), Query Frame = 0
Query: 1091 HGQSNYDMTPAQETVFELSDEEEERRKHKQIPQWAQGPTLSTAARAQP--DPDNVFVNVPTCDLREVFG-NVRRFRPRSSSANWARDRVTAQEMVKF 1184
            +G+S     P   + +  S++E+  +KH Q P W   P++  A + Q   +PD++F  +    + EVF     +FRPRSSSANW++D +TA+E  ++
Sbjct: 1148 NGESEAIELPDIASEYSDSEDEDRAQKHAQFPVWTTSPSMKAALKEQETFNPDDIFGPMKPLAMEEVFRVKASKFRPRSSSANWSKDGITAREEAEY 1244          
BLAST of Ggra1861.t1 vs. uniprot
Match: A0A0C3QR61 (INCENP_ARK-bind domain-containing protein n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3QR61_9AGAM)

HSP 1 Score: 58.2 bits (139), Expect = 3.420e-6
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 0
Query: 1100 PAQETVFELSDEEEERRKHKQIPQWAQGPTLSTAA--RAQPDPDNVFVNVPTCDLREVFGNVRRFRPRSSSANWARDRVTAQEMVKF 1184
            P  E V+  SD E+E R   + P W Q P L  A   +AQ +PD +F  +P  D+ E+F   R+FRPRSSSANW    ++ +E VK+
Sbjct:   46 PNSEYVY--SDSEDEGRNTGR-PSWTQSPNLRQALEQQAQYNPDLIFGPIPQLDMGEMFPK-RKFRPRSSSANWEGHALSKEEQVKY 128          
BLAST of Ggra1861.t1 vs. uniprot
Match: M1UWU8 (PHD-type domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UWU8_CYAM1)

HSP 1 Score: 62.0 bits (149), Expect = 9.050e-6
Identity = 38/101 (37.62%), Postives = 55/101 (54.46%), Query Frame = 0
Query: 1094 SNYDMTPAQETVFELSDEEEER---RKHKQIPQWAQGPTLSTAARAQP--DPDNVFVNVPTCDLREVFG---NVRRFRPRSSSANWARDRVTAQEMVKFRR 1186
            + Y +TP +    + SD+E       K   IP+WA+   L  A   Q   DPD +F  V TCDL ++FG   N  R+R R+SS +W RDR+T +E   +R+
Sbjct: 2127 AEYPLTPERHHSADASDDESAAVPAAKRHLIPEWARSHRLYGALIEQTRVDPDTIFPRVHTCDLVDIFGGGTNRPRYRRRTSSGDWVRDRLTWREEAAYRK 2227          
The following BLAST results are available for this feature:
BLAST of Ggra1861.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3ISJ71.610e-9948.64Reticulocyte-binding protein 2-like n=1 Tax=Gracil... [more]
R7QUB61.090e-1341.49INCENP_ARK-bind domain-containing protein n=1 Tax=... [more]
A0A5J4YPP14.510e-734.96Inner centromere protein-related protein pic1 n=1 ... [more]
A0A1Z5JK768.230e-736.08SAP domain-containing protein n=2 Tax=Fistulifera ... [more]
A0A0F7SRH52.760e-634.02Inner centromere protein, ARK-binding domain n=1 T... [more]
A0A0C3QR613.420e-642.53INCENP_ARK-bind domain-containing protein n=1 Tax=... [more]
M1UWU89.050e-637.62PHD-type domain-containing protein n=1 Tax=Cyanidi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 919..1022
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..546
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 414..441
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..263
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 810..853
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 598..634
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 322..337
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 770..785
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 730..750
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 916..1040
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 394..408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 911..1138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 442..463
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 726..866
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1077..1102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 598..620
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..308
IPR005635Inner centromere protein, ARK-binding domainPFAMPF03941INCENP_ARK-bindcoord: 1109..1156
e-value: 3.0E-9
score: 36.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:970552..974142 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1861.t1Ggra1861.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 970552..974142 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1861.t1 ID=Ggra1861.t1|Name=Ggra1861.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1197bp
MISPFEATLRGLSDASRTYQLELSSFAAATQLAAKRDAALIIRSAEHFIS
DTHKQLRSATVAIRRRRRARRKHARRSPTPRSPLATLPLNAAADGSRARS
VHQLLQNDRLQTEGEPPVPLVAPLPDASPRRSDGGAEQLAVDPVGERSSP
TSVEHSCTAQDEVATRDRRSTATVESYETANADVLTARVVPDTASSQSDS
PASSPAPPSPPQPRVHNVVQSTPSTDHQPNHHPHDVQHQSLPLDTRANTP
HEQSPSHNVQPEHEPQEQQPHRSPLQQHAPKTSQTSASEAAEPQKPQSNH
SRSSPDTAFPFESHVPADIPADQSHVQQQQPHSVPHSPQPDSGAEREASF
STQQQNDAKLSTPQVGSDELTAGSSSESETHSDDGPPAGIQQSPLPAVNL
QVQQTAAITRPVKVDKAESSDNERDEPKEESSCERGRPSADFASRESQQM
AGQQFQSAPIQTHEEGLDGNAAKVAKSKETSPVVEAEAIIREAEQPFTER
NPSGDLEMSPGEENESSVPNSAPAPEQVRPSRIPRKPSRIVVDNSGKIDN
SSLNALSRIMNTKPVDNTDTQIRKSTQKFTTPRTTKLFKPNNNIYSLQQN
GNVSPVQQFSSSNRSSVLSHTPGAEAPFKRQSPVVSRQHKLESLNKQLES
FQSSKTTGLQGPELQMAELRNGRTGAHVLGDLANSNVSQVMREGENVFRS
ARERTLKLAETHVKDTSKVDIWSMRAKGAKTTPSREKLRARERSKSKSAF
RSQLKEIMTGKACSAEDDVQAENGFNSSGSRLLESSGHRDSMVEPAVSDS
GEETVSINRFKDGETSSFAMESKEVAASPQNAQSSAVEKSSLRSETHDAC
SGANDSETGKDFGSGPAVASFSNTKMEEVLDIERVPVANAPLTNLMTSLV
SFLPGTSSLLGARPTREQSEETEAEAAAKRQKLDIERREAEVQARREAQR
LLKQKETEEKQRRAEKRRLLLARAEKEKEEERRRKEERRLKKKLEEEEAR
KKKKQEDDRKKEERRRLVLEKRAQNEMKLKRKKKGIEPLPSRKVPKGISG
KSGIASQGASHSPDTGLPGYKKRKLSGTPSTPVTKKSDTCHGQSNYDMTP
AQETVFELSDEEEERRKHKQIPQWAQGPTLSTAARAQPDPDNVFVNVPTC
DLREVFGNVRRFRPRSSSANWARDRVTAQEMVKFRRGQTAFNEHPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005635Inner_centromere_prot_ARK-bd