Ggra1794.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1794.t1
Unique NameGgra1794.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length250
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:650358..651107 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1794Ggra1794Gracilaria gracilis GNS1m malegenetig00000050_pilon 650358..651107 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1794.t1.start1Ggra1794.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000050_pilon 650358..650360 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1794.t1.CDS1Ggra1794.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000050_pilon 650358..651107 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1794.t1.exon1Ggra1794.t1.exon1Gracilaria gracilis GNS1m maleexontig00000050_pilon 650358..651107 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1794.t1.stop1Ggra1794.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000050_pilon 651105..651107 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1794.t1Ggra1794.t1Gracilaria gracilis GNS1m malepolypeptidetig00000050_pilon 650358..651107 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1794.t1 ID=Ggra1794.t1|Name=Ggra1794.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=250bp
MASLILFTIFRFFLEVTTSIAAPREFLAISFVYFARWMYSFYSLHSSSAW
PGRLFRVARSLRLLSTLRVGRSSFHDRRGAQEIVVRSGARQATGEFYWRG
KIHRQEAFRRGWLVYLVEEQMHTDLLSDLGTVEYARTQRKSTDDLYRRVY
QTVMNVEGAGDSRVDWTKFLSEYSPIAKTQLALRVGATSDSDLGGVARRV
AADACLYVAGKYPLRTDVQIALINSCLEDTARELANQLQEESDDDESKN*
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spliced messenger RNA

>Ggra1794.t1 ID=Ggra1794.t1|Name=Ggra1794.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=750bp|location=Sequence derived from alignment at tig00000050_pilon:650358..651107+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCATCATTAATCCTTTTCACAATCTTCAGGTTCTTTCTCGAAGTAAC
CACTTCCATAGCCGCGCCTCGTGAATTTCTTGCAATTTCCTTCGTCTACT
TTGCCAGGTGGATGTACTCCTTCTACAGTTTGCACTCCTCATCTGCCTGG
CCGGGGCGACTGTTCCGTGTTGCTAGGTCGCTGCGCTTATTATCCACCCT
CCGAGTTGGTCGTTCATCTTTTCACGATCGACGTGGAGCACAGGAGATAG
TCGTTCGGAGCGGCGCAAGACAAGCAACTGGCGAATTCTACTGGAGAGGA
AAAATCCATCGCCAAGAAGCTTTTAGGCGCGGATGGTTGGTATATCTCGT
GGAAGAACAAATGCATACCGATCTTCTTTCTGATTTGGGCACTGTCGAAT
ACGCAAGAACCCAAAGGAAAAGCACTGATGATCTGTATCGGCGCGTGTAC
CAAACGGTTATGAATGTCGAAGGTGCCGGTGACTCTCGCGTGGATTGGAC
AAAGTTTCTTTCGGAGTATTCTCCAATTGCCAAAACGCAGTTGGCCTTAA
GGGTTGGAGCTACATCTGACAGTGATCTTGGCGGTGTTGCGAGACGTGTA
GCCGCTGATGCGTGTTTGTATGTTGCCGGGAAATACCCCCTCAGAACCGA
CGTGCAAATCGCATTAATCAATTCGTGCCTTGAGGATACTGCCCGTGAGC
TTGCGAATCAACTCCAAGAGGAAAGTGACGATGATGAATCAAAGAACTAA
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protein sequence of Ggra1794.t1

>Ggra1794.t1 ID=Ggra1794.t1|Name=Ggra1794.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=250bp
MASLILFTIFRFFLEVTTSIAAPREFLAISFVYFARWMYSFYSLHSSSAW
PGRLFRVARSLRLLSTLRVGRSSFHDRRGAQEIVVRSGARQATGEFYWRG
KIHRQEAFRRGWLVYLVEEQMHTDLLSDLGTVEYARTQRKSTDDLYRRVY
QTVMNVEGAGDSRVDWTKFLSEYSPIAKTQLALRVGATSDSDLGGVARRV
AADACLYVAGKYPLRTDVQIALINSCLEDTARELANQLQEESDDDESKN*
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mRNA from alignment at tig00000050_pilon:650358..651107+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1794.t1 ID=Ggra1794.t1|Name=Ggra1794.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=750bp|location=Sequence derived from alignment at tig00000050_pilon:650358..651107+ (Gracilaria gracilis GNS1m male)
ATGGCATCATTAATCCTTTTCACAATCTTCAGGTTCTTTCTCGAAGTAAC
CACTTCCATAGCCGCGCCTCGTGAATTTCTTGCAATTTCCTTCGTCTACT
TTGCCAGGTGGATGTACTCCTTCTACAGTTTGCACTCCTCATCTGCCTGG
CCGGGGCGACTGTTCCGTGTTGCTAGGTCGCTGCGCTTATTATCCACCCT
CCGAGTTGGTCGTTCATCTTTTCACGATCGACGTGGAGCACAGGAGATAG
TCGTTCGGAGCGGCGCAAGACAAGCAACTGGCGAATTCTACTGGAGAGGA
AAAATCCATCGCCAAGAAGCTTTTAGGCGCGGATGGTTGGTATATCTCGT
GGAAGAACAAATGCATACCGATCTTCTTTCTGATTTGGGCACTGTCGAAT
ACGCAAGAACCCAAAGGAAAAGCACTGATGATCTGTATCGGCGCGTGTAC
CAAACGGTTATGAATGTCGAAGGTGCCGGTGACTCTCGCGTGGATTGGAC
AAAGTTTCTTTCGGAGTATTCTCCAATTGCCAAAACGCAGTTGGCCTTAA
GGGTTGGAGCTACATCTGACAGTGATCTTGGCGGTGTTGCGAGACGTGTA
GCCGCTGATGCGTGTTTGTATGTTGCCGGGAAATACCCCCTCAGAACCGA
CGTGCAAATCGCATTAATCAATTCGTGCCTTGAGGATACTGCCCGTGAGC
TTGCGAATCAACTCCAAGAGGAAAGTGACGATGATGAATCAAAGAACTAA
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Coding sequence (CDS) from alignment at tig00000050_pilon:650358..651107+

>Ggra1794.t1 ID=Ggra1794.t1|Name=Ggra1794.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=750bp|location=Sequence derived from alignment at tig00000050_pilon:650358..651107+ (Gracilaria gracilis GNS1m male)
ATGGCATCATTAATCCTTTTCACAATCTTCAGGTTCTTTCTCGAAGTAAC
CACTTCCATAGCCGCGCCTCGTGAATTTCTTGCAATTTCCTTCGTCTACT
TTGCCAGGTGGATGTACTCCTTCTACAGTTTGCACTCCTCATCTGCCTGG
CCGGGGCGACTGTTCCGTGTTGCTAGGTCGCTGCGCTTATTATCCACCCT
CCGAGTTGGTCGTTCATCTTTTCACGATCGACGTGGAGCACAGGAGATAG
TCGTTCGGAGCGGCGCAAGACAAGCAACTGGCGAATTCTACTGGAGAGGA
AAAATCCATCGCCAAGAAGCTTTTAGGCGCGGATGGTTGGTATATCTCGT
GGAAGAACAAATGCATACCGATCTTCTTTCTGATTTGGGCACTGTCGAAT
ACGCAAGAACCCAAAGGAAAAGCACTGATGATCTGTATCGGCGCGTGTAC
CAAACGGTTATGAATGTCGAAGGTGCCGGTGACTCTCGCGTGGATTGGAC
AAAGTTTCTTTCGGAGTATTCTCCAATTGCCAAAACGCAGTTGGCCTTAA
GGGTTGGAGCTACATCTGACAGTGATCTTGGCGGTGTTGCGAGACGTGTA
GCCGCTGATGCGTGTTTGTATGTTGCCGGGAAATACCCCCTCAGAACCGA
CGTGCAAATCGCATTAATCAATTCGTGCCTTGAGGATACTGCCCGTGAGC
TTGCGAATCAACTCCAAGAGGAAAGTGACGATGATGAATCAAAGAACTAA
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