Ggra1787.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1787.t1
Unique NameGgra1787.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length494
Homology
BLAST of Ggra1787.t1 vs. uniprot
Match: A0A2V3IJ57 (DNA repair protein RAD52-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ57_9FLOR)

HSP 1 Score: 217 bits (553), Expect = 2.610e-61
Identity = 110/159 (69.18%), Postives = 131/159 (82.39%), Query Frame = 0
Query:   25 VKQEAQEEECKPSTHALRLGGKRKAEWSPFGNAPFSEAETRVIRQRLNSGLTRSDTMQRRGPGGMSVTYLEGWRAIHEANQIFGFNGWSSEIVQLEQRYVSESGGRYSACATATVRITLRDGCRREDRGGGVADNMRSKGDAILKAEKEAVTDATKRAL 183
            +KQE  +   KPS +      KRKA    FG+APFS+ E R IRQRL+ GLTR++TMQR GPGGM +TY+EGW+ IHEANQIFGFNGWSS+IVQL+ RYV E+ GR+SAC +ATVRITLRDGC REDRGGG+A+NMRSKG+AI+KA+KEAVTDATKRAL
Sbjct:   21 IKQEPVD--VKPSPYR---SVKRKAS---FGDAPFSDDEFRSIRQRLDIGLTRAETMQRPGPGGMRITYVEGWKVIHEANQIFGFNGWSSQIVQLDTRYVEENRGRFSACVSATVRITLRDGCTREDRGGGLAENMRSKGEAIMKADKEAVTDATKRAL 171          
BLAST of Ggra1787.t1 vs. uniprot
Match: A0A7S1TED3 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TED3_9RHOD)

HSP 1 Score: 145 bits (366), Expect = 1.890e-36
Identity = 76/135 (56.30%), Postives = 91/135 (67.41%), Query Frame = 0
Query:   54 FGNAPFSEAETRVIRQRLNSGLTRSDTMQRRGPGGMSVTYLEGWRAIHEANQIFGFNGWSSEIVQLEQRYVSESGG-----RYSACATATVRITLRDGCRREDRGGGVADNMRSKGDAILKAEKEAVTDATKRAL 183
            FG   F  A+ R I  RL   L RSD   R GPGG+ +TYLEGWRA+ +AN IFGFNGWS  +  LE  +V E  G     R++ACA+A VR+TLRDG   ED G G+A+ M SKG+AI KA+KEAVTDA KRAL
Sbjct:   22 FGEDLFPVAKRRRIASRLREQLPRSDVCTRPGPGGVRLTYLEGWRAVDKANDIFGFNGWSCSVSSLELDFVEEKPGGNGRPRFTACASAVVRVTLRDGSFHEDSGSGLAEGMPSKGEAIGKAKKEAVTDARKRAL 156          
BLAST of Ggra1787.t1 vs. uniprot
Match: A0A098VV24 (Uncharacterized protein n=1 Tax=Mitosporidium daphniae TaxID=1485682 RepID=A0A098VV24_9MICR)

HSP 1 Score: 128 bits (321), Expect = 2.290e-30
Identity = 69/140 (49.29%), Postives = 93/140 (66.43%), Query Frame = 0
Query:   46 KRKAEWSPFG-NAPFSEAETRVIRQRLNSGLTRSDTMQRRGPGGMSVTYLEGWRAIHEANQIFGFNGWSSEIVQLEQRYVSE-SGGRYSACATATVRITLRDGCRREDRGGGVADNMRSKGDAILKAEKEAVTDATKRAL 183
            KR A   P   ++ ++E E + ++++L+ GLT S+  QR G GG+ + Y+EGWR I  AN+IFGFNGWSSEI+Q+   +V E S GR     + TVRI L DG   +D G G+++  +SKG A  KA KEAVTDATKRAL
Sbjct:   16 KRNAYLKPLAISSAYTEHERQELQEKLDQGLTLSEISQRPGIGGVKLAYIEGWRVISIANEIFGFNGWSSEIMQISTDFVDEDSQGRVCIGISCTVRIYLSDGTFHDDIGYGISEXQKSKGAAFEKARKEAVTDATKRAL 155          
BLAST of Ggra1787.t1 vs. uniprot
Match: A0A0C3B007 (Uncharacterized protein (Fragment) n=1 Tax=Scleroderma citrinum Foug A TaxID=1036808 RepID=A0A0C3B007_9AGAM)

HSP 1 Score: 119 bits (297), Expect = 7.290e-28
Identity = 67/139 (48.20%), Postives = 87/139 (62.59%), Query Frame = 0
Query:   54 FGNAPFS--EAETRV----IRQRLNSGLTRSDTMQRRGPGG-MSVTYLEGWRAIHEANQIFGFNGWSSEIVQLEQRYV--SESGGRYSACATATVRITLRDGCRREDRGGGVADNMRSKGDAILKAEKEAVTDATKRAL 183
            FGN PF+    ET +    ++ +LN  L      QR GPGG   +TY EGW+ I+ AN++FGFNGWSS IV +   ++  +E   RY+   TA VR+TLRDG   ED G G+ +N RSKG A+ K +KEAVTDA KR L
Sbjct:    3 FGNTPFTGPSEETAIKIATLQAKLNQKLGPEFISQRPGPGGGQKLTYAEGWKIINLANEVFGFNGWSSSIVNITTDFMDYNEESRRYNVGVTAIVRVTLRDGTYHEDVGYGLLENSRSKGAALDKCKKEAVTDALKRTL 141          
BLAST of Ggra1787.t1 vs. uniprot
Match: A0A1B9IIE2 (Uncharacterized protein n=1 Tax=Kwoniella mangroviensis CBS 10435 TaxID=1331196 RepID=A0A1B9IIE2_9TREE)

HSP 1 Score: 127 bits (318), Expect = 8.200e-28
Identity = 68/134 (50.75%), Postives = 88/134 (65.67%), Query Frame = 0
Query:   52 SPFGNAPFSEAETRVIRQRLNSGLTRSDTMQRRGPGG-MSVTYLEGWRAIHEANQIFGFNGWSSEIVQLEQRYVSES-GGRYSACATATVRITLRDGCRREDRGGGVADNMRSKGDAILKAEKEAVTDATKRAL 183
            S  G + +SE   ++++ RL   L      QR GPGG   ++Y+EGW+ I+ AN++FGFNGWSS IV L+  Y+ E  GGR S   TA +RITL DGC  ED G G  +N+R K  A+ KA+KEAVTDATKRAL
Sbjct:   70 STQGTSSWSEERIQMLQARLARKLGPEYVTQRPGPGGGPKLSYIEGWKVINLANEVFGFNGWSSSIVSLKTDYIDEKEGGRVSVNVTAIIRITLLDGCYHEDVGCGQGENIRGKSAALDKAQKEAVTDATKRAL 203          
BLAST of Ggra1787.t1 vs. uniprot
Match: A0A0L0HIH5 (Recombination protein rad52 n=2 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HIH5_SPIPD)

HSP 1 Score: 126 bits (317), Expect = 1.380e-27
Identity = 66/132 (50.00%), Postives = 83/132 (62.88%), Query Frame = 0
Query:   52 SPFGNAPFSEAETRVIRQRLNSGLTRSDTMQRRGPGGMSVTYLEGWRAIHEANQIFGFNGWSSEIVQLEQRYVSESGGRYSACATATVRITLRDGCRREDRGGGVADNMRSKGDAILKAEKEAVTDATKRAL 183
            S FG+  +S  E + +R +LN  L      QR GPGG  V+YLEGW+A   AN IFGFNGWSS +V +   +V    G+ S   ++ VR+TL+DG   ED G G  +N RSK  A  KA+KEAVTDATKRAL
Sbjct:   12 SLFGSYQYSSNEAQEVRTKLNLKLGPEYISQRSGPGGSKVSYLEGWKATQLANDIFGFNGWSSTLVDITVDFVDVDNGKVSMGISSVVRVTLKDGSFHEDVGYGSIENARSKAQAFEKAKKEAVTDATKRAL 143          
BLAST of Ggra1787.t1 vs. uniprot
Match: A0A067NYK4 (Uncharacterized protein n=1 Tax=Pleurotus ostreatus PC15 TaxID=1137138 RepID=A0A067NYK4_PLEOS)

HSP 1 Score: 117 bits (293), Expect = 2.320e-27
Identity = 64/125 (51.20%), Postives = 81/125 (64.80%), Query Frame = 0
Query:   62 AETRVIRQRLNSGLTRSDTMQRRGPGG-MSVTYLEGWRAIHEANQIFGFNGWSSEIVQLEQRYVS--ESGGRYSACATATVRITLRDGCRREDRGGGVADNMRSKGDAILKAEKEAVTDATKRAL 183
            A+   ++ +LN  L      QR GPGG   +TY EGW+ I+ AN++FGFNGWSS IV L   Y+   E G R++   TA VR+TLRDG   ED G GV +N +SKG A+ K +KEAVTDA KRAL
Sbjct:    9 AKIATLQAKLNKKLGPEYISQRPGPGGGPKLTYAEGWKIINLANEVFGFNGWSSNIVSLTTDYIDTHEEGRRHNVGVTAIVRVTLRDGVFHEDVGYGVIENAKSKGAALDKCKKEAVTDAIKRAL 133          
BLAST of Ggra1787.t1 vs. uniprot
Match: A0A507EP14 (Uncharacterized protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507EP14_9FUNG)

HSP 1 Score: 125 bits (315), Expect = 2.450e-27
Identity = 65/132 (49.24%), Postives = 83/132 (62.88%), Query Frame = 0
Query:   52 SPFGNAPFSEAETRVIRQRLNSGLTRSDTMQRRGPGGMSVTYLEGWRAIHEANQIFGFNGWSSEIVQLEQRYVSESGGRYSACATATVRITLRDGCRREDRGGGVADNMRSKGDAILKAEKEAVTDATKRAL 183
            S FG+  +S  E + +R +L+  L      QR GPGG  V+YLEGW+A   AN+IFGFNGWSS +V     +V    G+ S   ++ VR+TL+DG   ED G G  +N RSK  A  KA+KEAVTDATKRAL
Sbjct:   12 SSFGSYQYSSGEAQEVRTKLSLKLGPEYISQRSGPGGTKVSYLEGWKATQLANEIFGFNGWSSTLVDTTVDFVDVDNGKVSMGISSVVRVTLKDGSFHEDVGYGSIENARSKAQAFEKAKKEAVTDATKRAL 143          
BLAST of Ggra1787.t1 vs. uniprot
Match: A0A1B9FT47 (Uncharacterized protein n=1 Tax=Kwoniella bestiolae CBS 10118 TaxID=1296100 RepID=A0A1B9FT47_9TREE)

HSP 1 Score: 125 bits (313), Expect = 4.720e-27
Identity = 68/134 (50.75%), Postives = 87/134 (64.93%), Query Frame = 0
Query:   52 SPFGNAPFSEAETRVIRQRLNSGLTRSDTMQRRGPGG-MSVTYLEGWRAIHEANQIFGFNGWSSEIVQLEQRYVSES-GGRYSACATATVRITLRDGCRREDRGGGVADNMRSKGDAILKAEKEAVTDATKRAL 183
            S  GN  +SE   ++++ RL   L      QR GPGG   ++Y+EGW+ I+ AN++FGFNGWSS IV L+  Y+ E  GGR S   TA +RITL DG   ED G G  +N+R K  A+ KA+KEAVTDATKRAL
Sbjct:   70 STQGNTSWSEERIQMLQARLARKLGPEYVTQRPGPGGGPKLSYIEGWKVINLANEVFGFNGWSSSIVSLKTDYIDEKEGGRVSVNVTAIIRITLLDGSYHEDVGCGQGENIRGKSAALDKAQKEAVTDATKRAL 203          
BLAST of Ggra1787.t1 vs. uniprot
Match: A0A1B9GWN4 (Uncharacterized protein n=2 Tax=Kwoniella heveanensis TaxID=89924 RepID=A0A1B9GWN4_9TREE)

HSP 1 Score: 125 bits (313), Expect = 6.070e-27
Identity = 70/146 (47.95%), Postives = 91/146 (62.33%), Query Frame = 0
Query:   44 GGKRKAEWSPFGN----APFSEAETRVIRQRLNSGLTRSDTMQRRGPGG-MSVTYLEGWRAIHEANQIFGFNGWSSEIVQLEQRYVSES-GGRYSACATATVRITLRDGCRREDRGGGVADNMRSKGDAILKAEKEAVTDATKRAL 183
            GG      S FG+    + +SE   + ++ RL   L      QR GPGG   ++Y+EGW+ I+ AN++FGFNGWSS IV L   ++ E  GGR S   TA +RITL+DGC  ED G G  +N+R K  A+ KA+KEAVTDATKRAL
Sbjct:   65 GGXGAGNQSYFGSTQGVSSWSEERVQQLQARLARKLGPEYVTQRPGPGGGPKLSYIEGWKVINLANEVFGFNGWSSSIVSLRTDFIDEKEGGRVSVNVTAIIRITLQDGCSHEDVGCGQGENIRGKAAALDKAQKEAVTDATKRAL 210          
The following BLAST results are available for this feature:
BLAST of Ggra1787.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJ572.610e-6169.18DNA repair protein RAD52-like n=1 Tax=Gracilariops... [more]
A0A7S1TED31.890e-3656.30Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A098VV242.290e-3049.29Uncharacterized protein n=1 Tax=Mitosporidium daph... [more]
A0A0C3B0077.290e-2848.20Uncharacterized protein (Fragment) n=1 Tax=Sclerod... [more]
A0A1B9IIE28.200e-2850.75Uncharacterized protein n=1 Tax=Kwoniella mangrovi... [more]
A0A0L0HIH51.380e-2750.00Recombination protein rad52 n=2 Tax=Spizellomyces ... [more]
A0A067NYK42.320e-2751.20Uncharacterized protein n=1 Tax=Pleurotus ostreatu... [more]
A0A507EP142.450e-2749.24Uncharacterized protein n=1 Tax=Spizellomyces sp. ... [more]
A0A1B9FT474.720e-2750.75Uncharacterized protein n=1 Tax=Kwoniella bestiola... [more]
A0A1B9GWN46.070e-2747.95Uncharacterized protein n=2 Tax=Kwoniella heveanen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042525DNA repair protein Rad52/59/22 superfamilyGENE3D3.30.390.80DNA repair protein Rad52/59/22coord: 60..194
e-value: 3.6E-40
score: 139.1
IPR041247Rad52 familyPFAMPF04098Rad52_Rad22coord: 66..186
e-value: 4.9E-36
score: 124.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 6..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 454..493
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 56..191
IPR007232DNA repair protein Rad52/59/22PANTHERPTHR12132DNA REPAIR AND RECOMBINATION PROTEIN RAD52, RAD59coord: 49..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:624560..626041 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1787.t1Ggra1787.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 624560..626041 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1787.t1 ID=Ggra1787.t1|Name=Ggra1787.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=494bp
MEHFALLDMAGSGGRGDDQHLGGGVKQEAQEEECKPSTHALRLGGKRKAE
WSPFGNAPFSEAETRVIRQRLNSGLTRSDTMQRRGPGGMSVTYLEGWRAI
HEANQIFGFNGWSSEIVQLEQRYVSESGGRYSACATATVRITLRDGCRRE
DRGGGVADNMRSKGDAILKAEKEAVTDATKRALAELCDCASDGVQPLYQR
QTRARACIARRARGRRAGVVVRRHGARPYRSGAAGAQHVQLGPSSSLELC
RAAAAGGVGSSTQQQRLRQHPARGRHLPAAAGTPTPSGRRPTARGRSRWE
EWQAATAAAAAPALARGRRRRTTASGKMGAAATATATAKQADIDALIALA
VGAGVTPAAAHDERSTYIRKDASVAPLQVRTRRDVRSGAAAFTCDAQPPR
QGALPLLFAADRRPPDCDGSRNACRAATASTATGGYAAGGRQVGAQLRVS
YLSESSPSLTSSLRRRPRRRLLPQRSRGDGAQPQAPVGDSYAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042525Rad52_Rad59_Rad22_sf
IPR041247Rad52_fam
IPR007232Rad52_Rad59_Rad22