Ggra1797.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1797.t1
Unique NameGgra1797.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length159
Homology
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BLAST of Ggra1797.t1 vs. uniprot
Match: A0A2V3IWN0 (Protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWN0_9FLOR)

HSP 1 Score: 138 bits (348), Expect = 7.430e-39
Identity = 85/131 (64.89%), Postives = 96/131 (73.28%), Query Frame = 0 
Query:   22 SSRRVFLRRAIAVTLLSALPHPLPT--PAVPTKQWPPEELCTHCSGRGKQACSICEGSGTLTIDDSVVVQDNVCPXXXXXXXVXXXXXXXLGLANTNGILRNAARDGSLRMLRNGSYEILDCSAFPACDIY 150
            ++RR  LR  +A    + LP P     P     +W PE+LC  C GRGKQ CS+C GSG  T+DDSVV+QD+V  XXXXXXX XXXXXXX  LANTNGILRNAARDG LRMLRNGSYEILDCSAFP CD+Y
Sbjct:   28 TTRRDVLRYTLAAVCSALLPRPTHAAEPESEATKWRPEDLCGSCFGRGKQTCSLCSGSGVFTVDDSVVIQDHVXXXXXXXXXXXXXXXXXXXLANTNGILRNAARDGKLRMLRNGSYEILDCSAFPVCDMY 158
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BLAST of Ggra1797.t1 vs. uniprot
Match: A0A7S0BIN5 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BIN5_9RHOD)

HSP 1 Score: 94.7 bits (234), Expect = 7.850e-22
Identity = 59/104 (56.73%), Postives = 73/104 (70.19%), Query Frame = 0 
Query:   44 LPTPAVPTKQWPPEELCTHCSGRGKQACSICEGSGTLTIDDSVVVQDNVCPXXXXXXXVXXXXXXXLGLANTNGILRNAARDGSLRMLRNGSYEILDCSAFPAC 147
            LP PA   K+W PEELC +CSGRG Q CS C G+G   + DS+ +   V  XXXXXXX XXXXXXX  L N  G+LR+ + DGSLR+ ++GS EIL+C AFP+C
Sbjct:   43 LPLPARAAKEWKPEELCRNCSGRGLQECSFCLGTGLFELGDSIAMSTQVXXXXXXXXXXXXXXXXXXXLRNVKGVLRDGSNDGSLRVKKDGSIEILNCEAFPSC 146
The following BLAST results are available for this feature:
BLAST of Ggra1797.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IWN07.430e-3964.89Protein EMBRYO SAC DEVELOPMENT ARREST 3, chloropla... [more]
A0A7S0BIN57.850e-2256.73Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.10.230.10coord: 51..115
e-value: 4.5E-7
score: 31.7
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 54..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:653628..654174 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1797.t1Ggra1797.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 653628..654174 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1797.t1 ID=Ggra1797.t1|Name=Ggra1797.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=159bp
MTAFVPTAPICIIESPKTPPPSSRRVFLRRAIAVTLLSALPHPLPTPAVP
TKQWPPEELCTHCSGRGKQACSICEGSGTLTIDDSVVVQDNVCPNCQGAG
SVRCPGCIGLGLANTNGILRNAARDGSLRMLRNGSYEILDCSAFPACDIY
GAGRRSQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf