Ggra1768.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1768.t1
Unique NameGgra1768.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length432
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:577725..579069 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog10224.XP_002736853.1
Preferred nameSIRT6
PFAMsSIR2
Max annot lvl33208|Metazoa
KEGG koko:K11416
KEGG Pathwayko04714,ko05230,map04714,map05230
GOsGO:0000003,GO:0000018,GO:0000166,GO:0000228,GO:0000578,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000792,GO:0001672,GO:0001936,GO:0001938,GO:0003002,GO:0003006,GO:0003007,GO:0003241,GO:0003245,GO:0003247,GO:0003674,GO:0003682,GO:0003712,GO:0003714,GO:0003824,GO:0003950,GO:0003956,GO:0004407,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005654,GO:0005694,GO:0005720,GO:0005724,GO:0005737,GO:0006109,GO:0006110,GO:0006139,GO:0006140,GO:0006259,GO:0006281,GO:0006282,GO:0006284,GO:0006325,GO:0006355,GO:0006464,GO:0006471,GO:0006476,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007028,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007315,GO:0007350,GO:0007351,GO:0007389,GO:0007507,GO:0007517,GO:0007568,GO:0008134,GO:0008150,GO:0008152,GO:0008270,GO:0008284,GO:0008285,GO:0008340,GO:0008358,GO:0008595,GO:0009266,GO:0009408,GO:0009628,GO:0009653,GO:0009790,GO:0009798,GO:0009880,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009948,GO:0009952,GO:0009987,GO:0009994,GO:0010259,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010563,GO:0010569,GO:0010604,GO:0010605,GO:0010629,GO:0010638,GO:0010675,GO:0010677,GO:0010827,GO:0010829,GO:0010847,GO:0012505,GO:0014706,GO:0016043,GO:0016049,GO:0016569,GO:0016570,GO:0016575,GO:0016740,GO:0016757,GO:0016763,GO:0016787,GO:0016810,GO:0016811,GO:0017136,GO:0019213,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030719,GO:0030808,GO:0030809,GO:0030811,GO:0030812,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0031445,GO:0031453,GO:0031647,GO:0031648,GO:0031933,GO:0031935,GO:0031937,GO:0031938,GO:0031940,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032129,GO:0032204,GO:0032206,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032991,GO:0033043,GO:0033044,GO:0033500,GO:0033554,GO:0033558,GO:0034622,GO:0034641,GO:0034762,GO:0034763,GO:0034979,GO:0035265,GO:0035282,GO:0035601,GO:0035770,GO:0036094,GO:0036211,GO:0036464,GO:0040007,GO:0042127,GO:0042325,GO:0042326,GO:0042592,GO:0042593,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043467,GO:0043470,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0045495,GO:0045765,GO:0045766,GO:0045799,GO:0045820,GO:0045892,GO:0045912,GO:0045934,GO:0045935,GO:0045936,GO:0045980,GO:0046324,GO:0046325,GO:0046483,GO:0046872,GO:0046914,GO:0046969,GO:0048037,GO:0048145,GO:0048146,GO:0048468,GO:0048469,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048588,GO:0048589,GO:0048599,GO:0048609,GO:0048644,GO:0048729,GO:0048731,GO:0048738,GO:0048856,GO:0048869,GO:0048878,GO:0050662,GO:0050678,GO:0050679,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051052,GO:0051054,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051193,GO:0051195,GO:0051196,GO:0051198,GO:0051239,GO:0051240,GO:0051252,GO:0051253,GO:0051276,GO:0051287,GO:0051704,GO:0051716,GO:0055008,GO:0055017,GO:0060255,GO:0060293,GO:0060415,GO:0060419,GO:0060537,GO:0060560,GO:0060688,GO:0060968,GO:0061061,GO:0061647,GO:0062012,GO:0062014,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070403,GO:0070925,GO:0070932,GO:0071704,GO:0071826,GO:0071840,GO:0072091,GO:0072359,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0098687,GO:0098732,GO:0140096,GO:0140110,GO:1900371,GO:1900372,GO:1900542,GO:1900543,GO:1901265,GO:1901342,GO:1901360,GO:1901363,GO:1901564,GO:1902275,GO:1902679,GO:1902732,GO:1903506,GO:1903507,GO:1903578,GO:1903579,GO:1903863,GO:1904018,GO:1905269,GO:1905330,GO:1905332,GO:1905547,GO:1905549,GO:1905553,GO:1905555,GO:1905562,GO:1905564,GO:1990619,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000648,GO:2000779,GO:2001020,GO:2001141,GO:2001169,GO:2001170,GO:2001252
Evalue7.14e-65
EggNOG OGsCOG0846@1|root,KOG1905@2759|Eukaryota,38FZB@33154|Opisthokonta,3B9VN@33208|Metazoa,3CZVD@33213|Bilateria
EC2.4.2.31
Descriptionpost-embryonic cardiac muscle cell growth involved in heart morphogenesis
COG categoryBK
BRITEko00000,ko00001,ko01000,ko03036
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1768Ggra1768Gracilaria gracilis GNS1m malegenetig00000050_pilon 577725..579069 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1768.t1Ggra1768.t1Gracilaria gracilis GNS1m malepolypeptidetig00000050_pilon 577725..579069 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1768.t1.stop1Ggra1768.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000050_pilon 577725..577727 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1768.t1.CDS1Ggra1768.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000050_pilon 577725..577874 -
Ggra1768.t1.CDS2Ggra1768.t1.CDS2Gracilaria gracilis GNS1m maleCDStig00000050_pilon 577924..579069 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1768.t1.exon1Ggra1768.t1.exon1Gracilaria gracilis GNS1m maleexontig00000050_pilon 577725..577874 -
Ggra1768.t1.exon2Ggra1768.t1.exon2Gracilaria gracilis GNS1m maleexontig00000050_pilon 577924..579069 -


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1768.t1.intron1Ggra1768.t1.intron1Gracilaria gracilis GNS1m maleintrontig00000050_pilon 577875..577923 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1768.t1.start1Ggra1768.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000050_pilon 579067..579069 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1768.t1 ID=Ggra1768.t1|Name=Ggra1768.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=432bp
MTSAHGYADRLSTHAYKGKLDLLHRPDPPLAVLHKSRVLAHRINSASHVV
VHTGAGISTNAGINDFRGPNGVWTMQRKRAKRRRTSLAPLRSHVTFENAV
PTLTHMALVALHRQSHVKYIISQNVDCLHLRSGFPREALSELHGNLFVQW
CPQCRREIVLETQTETVGMKPTGTTCECGQPMTDKALDWDDVLPEPDFEL
AKKHSAKSDFNLVVGTSCQMEPARSLHFRGNGGKRNRAIVNLSHTDFDDR
FGICIRACSDIVFAIVATELGVRLPSYEKMAKLILSIRWIDRGVHCRVLW
KNGVVTHNVDVRYRCVDDDGQQTEWTQRISDFPYQASIETSGRHIEAEVT
AKSSKLRLEARADGRNTIEAEGEIAVDRKDWQRNTAVNMRMPMMMCGLFL
ELVEGGVSAVCVDKKYGVARIGDPNMRRNAN*
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spliced messenger RNA

>Ggra1768.t1 ID=Ggra1768.t1|Name=Ggra1768.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1296bp|location=Sequence derived from alignment at tig00000050_pilon:577725..579069- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACTTCCGCACACGGCTACGCCGATCGCCTCTCTACGCACGCTTACAA
GGGCAAACTCGACCTCCTGCACCGCCCAGATCCACCGCTAGCCGTTTTGC
ACAAGTCTCGTGTGCTTGCTCATCGCATCAACAGCGCCTCCCATGTCGTC
GTCCACACCGGCGCTGGCATATCCACCAACGCTGGTATCAACGATTTTCG
AGGACCCAATGGAGTTTGGACCATGCAGCGAAAGCGCGCCAAACGCCGAC
GCACCTCTCTCGCCCCGTTGCGCTCTCATGTTACATTTGAAAACGCTGTG
CCCACCCTAACGCACATGGCCCTAGTCGCTCTGCATAGACAGTCTCACGT
GAAGTACATAATTTCCCAGAACGTGGACTGCTTGCATTTGCGCTCCGGTT
TCCCTCGGGAAGCTCTATCTGAGCTGCATGGAAATCTTTTTGTCCAGTGG
TGCCCTCAGTGTCGTCGTGAGATTGTACTCGAAACGCAGACCGAAACAGT
AGGAATGAAGCCTACAGGCACCACTTGCGAGTGCGGCCAGCCCATGACGG
ATAAAGCCCTGGACTGGGATGATGTTTTGCCAGAACCAGACTTCGAGCTT
GCGAAAAAGCACAGTGCCAAGTCTGATTTCAATTTGGTTGTAGGCACTTC
TTGTCAGATGGAACCAGCCAGATCTTTGCACTTCCGGGGTAACGGAGGTA
AGAGGAATCGCGCAATCGTCAATCTCAGCCATACCGATTTTGACGACCGC
TTCGGCATATGTATCAGAGCTTGTAGTGACATTGTTTTCGCCATCGTCGC
TACTGAGCTTGGGGTGCGACTCCCTTCGTATGAAAAAATGGCCAAACTCA
TTCTAAGCATCCGATGGATAGATAGAGGCGTACATTGTCGTGTGCTCTGG
AAGAATGGAGTTGTAACCCACAACGTTGATGTTCGGTATCGTTGTGTCGA
CGATGATGGTCAGCAAACTGAATGGACACAACGTATTTCTGATTTTCCGT
ACCAAGCAAGCATTGAAACAAGTGGACGGCATATCGAAGCGGAGGTTACA
GCAAAGAGCAGTAAATTGCGGTTGGAAGCCAGAGCTGATGGACGAAACAC
CATAGAAGCGGAGGGTGAAATCGCAGTGGATCGGAAAGACTGGCAGAGAA
ACACGGCAGTGAACATGAGGATGCCAATGATGATGTGTGGTTTGTTTCTG
GAACTCGTCGAGGGTGGAGTATCTGCTGTTTGTGTAGACAAGAAGTATGG
TGTGGCCAGAATCGGAGATCCGAACATGCGAAGGAATGCAAATTAG
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protein sequence of Ggra1768.t1

>Ggra1768.t1 ID=Ggra1768.t1|Name=Ggra1768.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=432bp
MTSAHGYADRLSTHAYKGKLDLLHRPDPPLAVLHKSRVLAHRINSASHVV
VHTGAGISTNAGINDFRGPNGVWTMQRKRAKRRRTSLAPLRSHVTFENAV
PTLTHMALVALHRQSHVKYIISQNVDCLHLRSGFPREALSELHGNLFVQW
CPQCRREIVLETQTETVGMKPTGTTCECGQPMTDKALDWDDVLPEPDFEL
AKKHSAKSDFNLVVGTSCQMEPARSLHFRGNGGKRNRAIVNLSHTDFDDR
FGICIRACSDIVFAIVATELGVRLPSYEKMAKLILSIRWIDRGVHCRVLW
KNGVVTHNVDVRYRCVDDDGQQTEWTQRISDFPYQASIETSGRHIEAEVT
AKSSKLRLEARADGRNTIEAEGEIAVDRKDWQRNTAVNMRMPMMMCGLFL
ELVEGGVSAVCVDKKYGVARIGDPNMRRNAN*
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mRNA from alignment at tig00000050_pilon:577725..579069-

Legend: polypeptideCDSexonstart_codonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1768.t1 ID=Ggra1768.t1|Name=Ggra1768.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1345bp|location=Sequence derived from alignment at tig00000050_pilon:577725..579069- (Gracilaria gracilis GNS1m male)
ATGACTTCCGCACACGGCTACGCCGATCGCCTCTCTACGCACGCTTACAA
GGGCAAACTCGACCTCCTGCACCGCCCAGATCCACCGCTAGCCGTTTTGC
ACAAGTCTCGTGTGCTTGCTCATCGCATCAACAGCGCCTCCCATGTCGTC
GTCCACACCGGCGCTGGCATATCCACCAACGCTGGTATCAACGATTTTCG
AGGACCCAATGGAGTTTGGACCATGCAGCGAAAGCGCGCCAAACGCCGAC
GCACCTCTCTCGCCCCGTTGCGCTCTCATGTTACATTTGAAAACGCTGTG
CCCACCCTAACGCACATGGCCCTAGTCGCTCTGCATAGACAGTCTCACGT
GAAGTACATAATTTCCCAGAACGTGGACTGCTTGCATTTGCGCTCCGGTT
TCCCTCGGGAAGCTCTATCTGAGCTGCATGGAAATCTTTTTGTCCAGTGG
TGCCCTCAGTGTCGTCGTGAGATTGTACTCGAAACGCAGACCGAAACAGT
AGGAATGAAGCCTACAGGCACCACTTGCGAGTGCGGCCAGCCCATGACGG
ATAAAGCCCTGGACTGGGATGATGTTTTGCCAGAACCAGACTTCGAGCTT
GCGAAAAAGCACAGTGCCAAGTCTGATTTCAATTTGGTTGTAGGCACTTC
TTGTCAGATGGAACCAGCCAGATCTTTGCACTTCCGGGGTAACGGAGGTA
AGAGGAATCGCGCAATCGTCAATCTCAGCCATACCGATTTTGACGACCGC
TTCGGCATATGTATCAGAGCTTGTAGTGACATTGTTTTCGCCATCGTCGC
TACTGAGCTTGGGGTGCGACTCCCTTCGTATGAAAAAATGGCCAAACTCA
TTCTAAGCATCCGATGGATAGATAGAGGCGTACATTGTCGTGTGCTCTGG
AAGAATGGAGTTGTAACCCACAACGTTGATGTTCGGTATCGTTGTGTCGA
CGATGATGGTCAGCAAACTGAATGGACACAACGTATTTCTGATTTTCCGT
ACCAAGCAAGCATTGAAACAAGTGGACGGCATATCGAAGCGGAGGTTACA
GCAAAGAGCAGTAAATTGCGGTTGGAAGCCAGAGCTGATGGACGAAACAC
CATAGAAGCGGAGGGTGAAATCGCAGTGGATCGGAAAGACTGGCAGGTAC
GTTGTGGGGAATTAATTACCCAGTTAAAGGCCCGTGCTTCTGCAGAGAAA
CACGGCAGTGAACATGAGGATGCCAATGATGATGTGTGGTTTGTTTCTGG
AACTCGTCGAGGGTGGAGTATCTGCTGTTTGTGTAGACAAGAAGTATGGT
GTGGCCAGAATCGGAGATCCGAACATGCGAAGGAATGCAAATTAG
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Coding sequence (CDS) from alignment at tig00000050_pilon:577725..579069-

>Ggra1768.t1 ID=Ggra1768.t1|Name=Ggra1768.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1296bp|location=Sequence derived from alignment at tig00000050_pilon:577725..579069- (Gracilaria gracilis GNS1m male)
ATGACTTCCGCACACGGCTACGCCGATCGCCTCTCTACGCACGCTTACAA
GGGCAAACTCGACCTCCTGCACCGCCCAGATCCACCGCTAGCCGTTTTGC
ACAAGTCTCGTGTGCTTGCTCATCGCATCAACAGCGCCTCCCATGTCGTC
GTCCACACCGGCGCTGGCATATCCACCAACGCTGGTATCAACGATTTTCG
AGGACCCAATGGAGTTTGGACCATGCAGCGAAAGCGCGCCAAACGCCGAC
GCACCTCTCTCGCCCCGTTGCGCTCTCATGTTACATTTGAAAACGCTGTG
CCCACCCTAACGCACATGGCCCTAGTCGCTCTGCATAGACAGTCTCACGT
GAAGTACATAATTTCCCAGAACGTGGACTGCTTGCATTTGCGCTCCGGTT
TCCCTCGGGAAGCTCTATCTGAGCTGCATGGAAATCTTTTTGTCCAGTGG
TGCCCTCAGTGTCGTCGTGAGATTGTACTCGAAACGCAGACCGAAACAGT
AGGAATGAAGCCTACAGGCACCACTTGCGAGTGCGGCCAGCCCATGACGG
ATAAAGCCCTGGACTGGGATGATGTTTTGCCAGAACCAGACTTCGAGCTT
GCGAAAAAGCACAGTGCCAAGTCTGATTTCAATTTGGTTGTAGGCACTTC
TTGTCAGATGGAACCAGCCAGATCTTTGCACTTCCGGGGTAACGGAGGTA
AGAGGAATCGCGCAATCGTCAATCTCAGCCATACCGATTTTGACGACCGC
TTCGGCATATGTATCAGAGCTTGTAGTGACATTGTTTTCGCCATCGTCGC
TACTGAGCTTGGGGTGCGACTCCCTTCGTATGAAAAAATGGCCAAACTCA
TTCTAAGCATCCGATGGATAGATAGAGGCGTACATTGTCGTGTGCTCTGG
AAGAATGGAGTTGTAACCCACAACGTTGATGTTCGGTATCGTTGTGTCGA
CGATGATGGTCAGCAAACTGAATGGACACAACGTATTTCTGATTTTCCGT
ACCAAGCAAGCATTGAAACAAGTGGACGGCATATCGAAGCGGAGGTTACA
GCAAAGAGCAGTAAATTGCGGTTGGAAGCCAGAGCTGATGGACGAAACAC
CATAGAAGCGGAGGGTGAAATCGCAGTGGATCGGAAAGACTGGCAGAGAA
ACACGGCAGTGAACATGAGGATGCCAATGATGATGTGTGGTTTGTTTCTG
GAACTCGTCGAGGGTGGAGTATCTGCTGTTTGTGTAGACAAGAAGTATGG
TGTGGCCAGAATCGGAGATCCGAACATGCGAAGGAATGCAAATTAG
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