Ggra947.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra947.t1 vs. uniprot
Match: A0A2V3IY64 (Sm protein F n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY64_9FLOR) HSP 1 Score: 151 bits (382), Expect = 7.440e-46 Identity = 70/83 (84.34%), Postives = 76/83 (91.57%), Query Frame = 0
Query: 1 MASKSSHINPKPFLLSLTGKPVIVKLKWGLEYRGYLKSVDNYMNLQLENSEEWVDGAMDGELGEILIRCNNVLYIRPGLAASQ 83
M SK +H+NP PFL SL GKPVIVKLKWG+EYRG+LKSVD YMN+QLENSEEWVDGAMDG LGEILIRCNNVLYIRPGLAAS+
Sbjct: 1 MTSKQTHVNPTPFLHSLIGKPVIVKLKWGMEYRGFLKSVDKYMNIQLENSEEWVDGAMDGHLGEILIRCNNVLYIRPGLAASE 83
BLAST of Ggra947.t1 vs. uniprot
Match: R7QKP6 (Sm protein F n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKP6_CHOCR) HSP 1 Score: 147 bits (372), Expect = 2.340e-44 Identity = 71/82 (86.59%), Postives = 77/82 (93.90%), Query Frame = 0
Query: 1 MASKSSHINPKPFLLSLTGKPVIVKLKWGLEYRGYLKSVDNYMNLQLENSEEWVDGAMDGELGEILIRCNNVLYIRPGLAAS 82
M+SKSS I+PKPFL SLTGKPVIVKLKWGLEYRG+L SVDNYMNLQLENSEEW+DGAM +LGEILIRCNNVLYIRPGLAA+
Sbjct: 1 MSSKSSVIHPKPFLASLTGKPVIVKLKWGLEYRGHLTSVDNYMNLQLENSEEWIDGAMADKLGEILIRCNNVLYIRPGLAAT 82
BLAST of Ggra947.t1 vs. uniprot
Match: A0A5P1EWT9 (Sm protein F n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A5P1EWT9_ASPOF) HSP 1 Score: 122 bits (306), Expect = 2.760e-34 Identity = 57/88 (64.77%), Postives = 73/88 (82.95%), Query Frame = 0
Query: 1 MASKSSHINPKPFLLSLTGKPVIVKLKWGLEYRGYLKSVDNYMNLQLENSEEWVDGAMDGELGEILIRCNNVLYIRPGLAASQAVDDA 88
+A ++ +NPKPFL +LTGKPVIVKLKWG+EY+GYL SVD+YMNLQL N+EE++DG G LGEILIRCNNVLY+R G+ + ++DA
Sbjct: 7 VAGEAIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLGEILIRCNNVLYLR-GVPEDEEIEDA 93
BLAST of Ggra947.t1 vs. uniprot
Match: A0A811PTF8 (Sm protein F n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811PTF8_9POAL) HSP 1 Score: 123 bits (308), Expect = 3.750e-34 Identity = 58/87 (66.67%), Postives = 71/87 (81.61%), Query Frame = 0
Query: 2 ASKSSHINPKPFLLSLTGKPVIVKLKWGLEYRGYLKSVDNYMNLQLENSEEWVDGAMDGELGEILIRCNNVLYIRPGLAASQAVDDA 88
A K+ +NPKPFL +LTGKPVIVKLKWG+EY+GYL SVD+YMNLQL N+EE++DG G LGEILIRCNNVLY+R G+ ++DA
Sbjct: 42 AGKTVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNLGEILIRCNNVLYLR-GVPEDAEIEDA 127
BLAST of Ggra947.t1 vs. uniprot
Match: small nuclear ribonucleoprotein F-like n=2 Tax=Styela clava TaxID=7725 RepID=UPI00193AA6C8 (small nuclear ribonucleoprotein F-like n=2 Tax=Styela clava TaxID=7725 RepID=UPI00193AA6C8) HSP 1 Score: 121 bits (304), Expect = 4.530e-34 Identity = 55/69 (79.71%), Postives = 63/69 (91.30%), Query Frame = 0
Query: 8 INPKPFLLSLTGKPVIVKLKWGLEYRGYLKSVDNYMNLQLENSEEWVDGAMDGELGEILIRCNNVLYIR 76
+NPKPF+ SLTGKPVIVKLKWG+EY+GYL SVD YMN+QL N+EE+VDGA+ G LGEILIRCNNVLYIR
Sbjct: 6 MNPKPFINSLTGKPVIVKLKWGMEYKGYLVSVDGYMNMQLANTEEYVDGALSGHLGEILIRCNNVLYIR 74
BLAST of Ggra947.t1 vs. uniprot
Match: small nuclear ribonucleoprotein F n=2 Tax=Archelosauria TaxID=1329799 RepID=UPI000521808D (small nuclear ribonucleoprotein F n=2 Tax=Archelosauria TaxID=1329799 RepID=UPI000521808D) HSP 1 Score: 122 bits (305), Expect = 6.100e-34 Identity = 54/74 (72.97%), Postives = 65/74 (87.84%), Query Frame = 0
Query: 3 SKSSHINPKPFLLSLTGKPVIVKLKWGLEYRGYLKSVDNYMNLQLENSEEWVDGAMDGELGEILIRCNNVLYIR 76
+KS +NPKPFL LTGKPV+VKLKWG+EY+GYL SVD YMN+QL N+EE++DGA+ G LGE+LIRCNNVLYIR
Sbjct: 23 TKSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIR 96
BLAST of Ggra947.t1 vs. uniprot
Match: A0A804J679 (Sm protein F n=9 Tax=Mesangiospermae TaxID=1437183 RepID=A0A804J679_MUSAM) HSP 1 Score: 121 bits (303), Expect = 6.250e-34 Identity = 57/81 (70.37%), Postives = 69/81 (85.19%), Query Frame = 0
Query: 8 INPKPFLLSLTGKPVIVKLKWGLEYRGYLKSVDNYMNLQLENSEEWVDGAMDGELGEILIRCNNVLYIRPGLAASQAVDDA 88
+NPKPFL +LTGKPVIVKLKWG+EY+GYL SVD+YMNLQL N+EE+VDG G LGEILIRCNNVLY+R G+ + ++DA
Sbjct: 6 VNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYVDGQFTGNLGEILIRCNNVLYLR-GVPEDEEIEDA 85
BLAST of Ggra947.t1 vs. uniprot
Match: A7RX20 (Sm protein F n=2 Tax=Actiniaria TaxID=6103 RepID=A7RX20_NEMVE) HSP 1 Score: 121 bits (303), Expect = 6.630e-34 Identity = 53/69 (76.81%), Postives = 63/69 (91.30%), Query Frame = 0
Query: 8 INPKPFLLSLTGKPVIVKLKWGLEYRGYLKSVDNYMNLQLENSEEWVDGAMDGELGEILIRCNNVLYIR 76
+NPKPFL SLTGKPVI+KLKWG+EY+GYL SVD YMNLQL N+EE++DGA+ G LGE+LIRCNNVLY+R
Sbjct: 7 LNPKPFLNSLTGKPVIIKLKWGMEYKGYLVSVDGYMNLQLANTEEFIDGALTGNLGEVLIRCNNVLYVR 75
BLAST of Ggra947.t1 vs. uniprot
Match: G1KPF7 (Sm protein F n=16 Tax=Euteleostomi TaxID=117571 RepID=G1KPF7_ANOCA) HSP 1 Score: 120 bits (302), Expect = 8.630e-34 Identity = 54/72 (75.00%), Postives = 63/72 (87.50%), Query Frame = 0
Query: 5 SSHINPKPFLLSLTGKPVIVKLKWGLEYRGYLKSVDNYMNLQLENSEEWVDGAMDGELGEILIRCNNVLYIR 76
S +NPKPFL LTGKPV+VKLKWG+EY+GYL SVD YMN+QL N+EE++DGAM G LGE+LIRCNNVLYIR
Sbjct: 1 SLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGAMSGHLGEVLIRCNNVLYIR 72
BLAST of Ggra947.t1 vs. uniprot
Match: LOW QUALITY PROTEIN: small nuclear ribonucleoprotein F n=1 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F4D4B38 (LOW QUALITY PROTEIN: small nuclear ribonucleoprotein F n=1 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F4D4B38) HSP 1 Score: 121 bits (304), Expect = 1.000e-33 Identity = 55/75 (73.33%), Postives = 66/75 (88.00%), Query Frame = 0
Query: 2 ASKSSHINPKPFLLSLTGKPVIVKLKWGLEYRGYLKSVDNYMNLQLENSEEWVDGAMDGELGEILIRCNNVLYIR 76
+S+S +NPKPFL LTGKPV+VKLKWG+EY+GYL SVD YMN+QL N+EE+VDGA+ G LGE+LIRCNNVLYIR
Sbjct: 27 SSQSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYVDGALAGHLGEVLIRCNNVLYIR 101 The following BLAST results are available for this feature:
BLAST of Ggra947.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra947.t1 ID=Ggra947.t1|Name=Ggra947.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=104bpback to top |