Ggra929.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra929.t1
Unique NameGgra929.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length511
Homology
BLAST of Ggra929.t1 vs. uniprot
Match: A0A2V3ITH0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITH0_9FLOR)

HSP 1 Score: 225 bits (573), Expect = 5.680e-64
Identity = 163/472 (34.53%), Postives = 244/472 (51.69%), Query Frame = 0
Query:    6 DFPLDIHPSWWNVLKFVILSLIITPLLEFLFQRMLSTLVTYHAICGRPIPLFDTNLGIFSLHSGYWGRHRNITVLLAPGLVLLATDVLFEFSFSTASVDVPRQMVLWSQPSHRQRYL-ATDDVIIQREPTAFPDQAA--QECLEGPSIMLRRNGSALLGPTFAHILGPFEYILDGKYQIRQPFLDQ-QNYTVWCSLDYTVANATILVPG----VYGKTDFETEGYDLSRDHGLENMEQWKQIVLEADMVS--KGELRFDGFQAKFFVGAKSVCVHGDN----HMRHSLCMLRNNSDVALVRSRVLNSNDFSTILGVVMHFSGPAVRRL-SEPGRQIRFL-AYILEKRALSSDLSRGHAAATVRKHVLEQIAKAALVIANEKGVGGIREFRMKLPVRFDSRQIAVAKDFVTIPLALLCLLFVAILLIDVSFRIRIERKDKKFGGTWRWSSLLRREHIEFSKQWLREKLANDLV 461
            +  L++ PS WN++K+V LSLIITP  EFL  R+      +  + GR + L DT LGIFSLHS +WGR RN  +LL  G  ++A ++LFEFSFS+  V   +   +WSQP H+QRYL ++++V   REP   P +AA  + C+EG   M R+  +      F   +   EY ++G Y +R+P+L    N T++CS D+    A+  VP     VY   D E EG+D       E+    + I  + DM    K  L  D  +   F G  S+C+   +       + LC LR  S  +L    +   ++  +I  +VM  SGPA+  L  + GRQIRFL + +          S G  A+ +RK  LEQI + AL++ANE+GV GIR  +    V    ++ A  K    IP AL+  + +  + ++V   I I +  +K G          +  +  S Q+LR++L NDL+
Sbjct:    3 ELSLNVSPSVWNIIKYVTLSLIITPTFEFLLHRLSQQKARWDILRGRTVALSDTRLGIFSLHSTFWGRSRNRYLLLVIGTFVIAIELLFEFSFSSKLVAKSKTEQVWSQPDHQQRYLISSEEVHFMREPALLPVEAANIEGCVEGEFNMRRKEKTK---DEFQQTI--MEYSINGMYTVRRPYLSATDNATLYCSADHIEKKASFFVPFATKVVYD--DVEEEGFDYFG--AFEDKFYNRSIYADVDMKLRFKANLTIDDTKLYMFNGKNSICIGSKSLAVFGTAYLLCGLRAQSAFSLAVGSLHEDDERVSISTIVMEMSGPALGPLVDQAGRQIRFLLSNLFLNLVWHRPASEG--ASKLRKTTLEQIVQIALIVANEEGVAGIRRVKASREVLDGVQERASVKRLAIIPGALIGGMLLLFISMNVLLAICIAKAQRKTG----------QHSVRISTQFLRKQLRNDLL 453          
BLAST of Ggra929.t1 vs. uniprot
Match: A0A2V3IIK4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIK4_9FLOR)

HSP 1 Score: 223 bits (569), Expect = 2.080e-63
Identity = 149/483 (30.85%), Postives = 239/483 (49.48%), Query Frame = 0
Query:    6 DFPLDIHPSWWNVLKFVILSLIITPLLEFLFQRMLSTLVTYHAICGRPIPLFDTNLGIFSLHSGYWGRHRNITVLLAPGLVLLATDVLFEFSFSTASVDVPRQMVLWSQPSHRQRYLATD---DVIIQREPTAFPDQAAQECLEGPSIMLRRNGSALLGPTFAHILGPFEYILDGKYQIRQPFLDQQNYTVWCSLDYTVANATILVPGVYGKTDFETEGYDLSRDHGLENMEQWKQIVLEADMVSKGELRFDGFQAKFFVGAKSVCVHGDNHMRHSLCMLRNNSDVALVRSRVLNSNDF--STILGVVMHFSGPAVRRLSEPGRQIRFLAYILEKRALSSDLS-RGHAAATVRKHVLEQIAKAALVIANEKGVGGIREFRMKLPVRFDSRQIAVAKDFVTIPLALLCLLFVAILLIDVSFRIRIERKDKKFGGTWRWSSLLRREHIEFSKQWLREKLANDLVLYNMHQDVQSSDIGPWVELGE 482
            D  L++ PS WNVLKF+IL++I TPLLEFL QR ++T  TY  + G  +   ++NLG+ SLHS YWGR RN   LL    ++ A++++FEFSFS  ++D+     +W  PSH + Y  +    D   +REP  FP  AA+ C++G S M RR G +         +  FEY ++  Y IR+P+L   N +V CS+  T+   +  VP VY   +  T    +       N E  +Q +      S G +       +      +VC+   +  +  LC +   +   L R+  + S+     T+L VV++ +G  V  +    R++R+LA +     L++ +  R  +   V K   E +A   LV+ANE+GVGG R    K        Q A  K    +P+A+L    V +L+++V+   ++     K  G   W         + S QWLRE++  DL+   + +++ S ++   +  GE
Sbjct:    3 DIVLNLDPSTWNVLKFIILTIITTPLLEFLLQRFINTKATYDVMRGEHVQFAESNLGVLSLHSVYWGRRRNSIYLLLVASLVFASELIFEFSFSAQALDIAEPREVWLPPSHAEHYTFSRRSLDGPERREPFQFPVLAAETCIKGESEM-RRTGRS--NEADGEFISGFEYHMEDTYVIRKPYLALDNSSVLCSVSTTIGRVSFFVPHVY-LVNSSTGAEGVLALKNTSNSENVRQSLTSGTFDSYGFVN----DVQVVASDNAVCIRSRSRSKTFLCAMYVMNAFILARTSEIWSDRVPDKTLLSVVLNATGQPVEGMRSRTRKLRYLATVSGNALLNTFVEGRRPSHQLVTKDKTETLALLVLVVANEEGVGGSRNKIGKRSFVIGQAQTATMKRLAFVPIAILVSFLVFLLVVEVTLS-KLIASSTKHQGRKIWGCTRAGSRADTSIQWLRERICEDLLHDGVFRNISSKELSLKIVSGE 476          
BLAST of Ggra929.t1 vs. uniprot
Match: A0A2V3IUL8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUL8_9FLOR)

HSP 1 Score: 204 bits (520), Expect = 3.300e-56
Identity = 155/494 (31.38%), Postives = 238/494 (48.18%), Query Frame = 0
Query:    5 SDFPLDIHPSWWNVLKFVILSLIITPLLEFLFQRMLSTLVTYHAICGRPIPLFDTNLGIFSLHSGYWGRHRNITVLLAPGLVLLATDVLFEFSFSTASVDVPRQMVLWSQPSHRQRYLAT---DDVIIQREPTAFPDQAAQECLEGPSIMLRRNGSALLGPTFAHILGPFEYILDGKYQIRQPFLDQQNYTVWCSLDYTVANATILVPGVYG----------KTDFETEGYDLSRDHGLENMEQWKQIVLEADMVSKGELRFDGFQAKFFVGAKSVCVHGDNHMRHSLCMLRNNSDVALVRSRVLNSNDFSTILGVVMHFSGPAVRRLSEPGRQIRFLAYILEKRALSSDLSRGHAAATVR---KHVLEQIAKAALVIANEKGVGGIREFRMKLPVRFDSRQIAVAKDFVTIPLALLCLLFVAILLIDVSFRIRIERKDKK-------FGGTWRWSSLLRREHIEFSKQWLREKLANDLVLYNMHQDVQSSDIG 475
            ++  L I PS  NV+K+ +++LI+TPL E L   ++S   TY  + G  I    + LGIFSLH  YWGR RN  +L+A G  ++AT++LFEFSFS+ +VD+     +W QPSH QRY+     + + + REPT FP   A  C  GP  MLR   +   G       G  E+ L+G Y IR P+  + +  V CS     A AT +VP V              +  T GY   +    +N      + L  D    GE+R          G    C         S C++R+       RS VL    F +I+ VV+  SG A+  L+E GRQ+R +  I+ +  L + +     + ++R   K+ +E +A+  +V ANE+GVGG++   +   V   SRQ+A A  ++   ++ L L+   +++  +  R+ I R   K       F   WR         ++ +KQ++R K+  DL  Y   + V   +IG
Sbjct:    2 TEIQLGIDPSILNVIKYGVVALILTPLFEILADSLVSAKSTYDVLSGHTIEFSHSQLGIFSLHGTYWGRSRNRFMLIALGFAVIATELLFEFSFSSTTVDLEEVRQVWKQPSHAQRYIPAAGRERIELYREPTEFPGAVALRCTRGPRTMLRYRSNHTDGNE--RYQGGLEFRLNGNYTIRMPYRARSDDEVLCSATQKTAKATFIVPRVVRTRTASQVEGVSLEVPTSGYKYIKSIVQDNPPPVIDLFLYTD-TEVGEVRS---------GDNGTCAG-------SWCLIRDRD-----RSFVLVFWTFESIV-VVIKASGNALEGLTERGRQVRLILTIIYEN-LFTGIGFNELSPSLRVAEKNDMETLARWMIVAANEEGVGGLKAATVNRTVVGGSRQMATATGYLPASVSGLALIGSLLMVSCLLVRVMIARMGDKQQPFAVRFWRQWR---------LQTTKQYMRAKMLEDLQHYGFCESVTLQNIG 460          
BLAST of Ggra929.t1 vs. uniprot
Match: A0A2V3IIJ0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIJ0_9FLOR)

HSP 1 Score: 167 bits (423), Expect = 2.930e-42
Identity = 112/397 (28.21%), Postives = 193/397 (48.61%), Query Frame = 0
Query:    9 LDIHPSWWNVLKFVILSLIITPLLEFLFQRMLSTLVTYHAICGRPIPLFDTNLGIFSLHSGYWGRHRNITVLLAPGLVLLATDVLFEFSFSTASVDVPRQMVLWSQPSHRQRYLATDDVIIQREPTAFPDQAAQECLEGPSIMLRRNGSALLGPTFAHILGPFEYILDGKYQIRQPFLDQQNYTVWCSLDYTVANATILVPGVYGKTDFETEGYDLSRDHGLENMEQWKQIVLEADMVSKGELRFDGFQAKFFVGAKSVCVHGDNHMRHS----------LCMLRNNSDVALVRSRVLNSNDFSTILGVVMHFSGPAVRRLS-EPGRQIRFLAYILEKRALS---SDLSRGHAAATVRKHVLEQIAKAALVIANEKGVGGIREFRMKLPVRFDSRQI 391
            L++ PS WNVLK+ + +L+ITP  E +   ++++  T     G  + LFD+ LGIF+LHS Y G+ R    L+    VL+A ++  E SFS A V V     +W  P+H +RY+  ++  I  EPT   +  +++C+ GP  M R +                +Y L   + +R  ++ +++  V C        A++  P +  +  +  EG+    D  L    +W Q +       +G   F+G +A+ + G ++ CV  D  +  +          +C L+ NS VA+  +  LN    +  + +++H  GP V  L+    RQ+R LA++ E R L    S+  +G     V+K  LE++A AAL+++ E+ V G+ E R +  V     Q+
Sbjct:    7 LNLSPSVWNVLKWALFTLVITPAFEIMTASLMASSATARVQAGAQLELFDSQLGIFALHSRYAGKRRTRLWLVLGTAVLMALELWLEMSFSAAEVVVTVSEEVWVGPNHDERYMRRENFSINDEPTRLLETMSRQCIAGPRAMKRDSVQRATVTVLEEAEVIAQYSLTANWTVRAAYVREEDSLVACDAVAETKWASVEAPNIVSQ--YGVEGFHSDCDPALGLDSEWFQTLHNESFTQRGAFVFEGERARAYSGTRATCVELDAGVDRAEDIDDVPLRLVCALQLNSTVAITLTAGLN---IARCVALLLH--GPGVETLAGSHARQLRLLAFVAETRILWPGWSNTLKG----MVQKRSLERVAMAALMVSGERAVSGVAERRERRRVTQSGGQV 392          
The following BLAST results are available for this feature:
BLAST of Ggra929.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3ITH05.680e-6434.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IIK42.080e-6330.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUL83.300e-5631.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IIJ02.930e-4228.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..98
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..396
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 397..419
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 420..510
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..36
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 397..419
NoneNo IPR availableTMHMMTMhelixcoord: 77..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:650456..651988 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra929.t1Ggra929.t1Gracilaria gracilis GNS1m malemRNAtig00000049_pilon 650456..651988 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra929.t1 ID=Ggra929.t1|Name=Ggra929.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=511bp
MSSSSDFPLDIHPSWWNVLKFVILSLIITPLLEFLFQRMLSTLVTYHAIC
GRPIPLFDTNLGIFSLHSGYWGRHRNITVLLAPGLVLLATDVLFEFSFST
ASVDVPRQMVLWSQPSHRQRYLATDDVIIQREPTAFPDQAAQECLEGPSI
MLRRNGSALLGPTFAHILGPFEYILDGKYQIRQPFLDQQNYTVWCSLDYT
VANATILVPGVYGKTDFETEGYDLSRDHGLENMEQWKQIVLEADMVSKGE
LRFDGFQAKFFVGAKSVCVHGDNHMRHSLCMLRNNSDVALVRSRVLNSND
FSTILGVVMHFSGPAVRRLSEPGRQIRFLAYILEKRALSSDLSRGHAAAT
VRKHVLEQIAKAALVIANEKGVGGIREFRMKLPVRFDSRQIAVAKDFVTI
PLALLCLLFVAILLIDVSFRIRIERKDKKFGGTWRWSSLLRREHIEFSKQ
WLREKLANDLVLYNMHQDVQSSDIGPWVELGERSHEWHVLPHPCSHVRPK
ARISSDRSGV*
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