Ggra939.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra939.t1
Unique NameGgra939.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length377
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:877372..878502 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra939Ggra939Gracilaria gracilis GNS1m malegenetig00000049_pilon 877372..878502 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra939.t1.start1Ggra939.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000049_pilon 877372..877374 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra939.t1.CDS1Ggra939.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000049_pilon 877372..878502 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra939.t1.exon1Ggra939.t1.exon1Gracilaria gracilis GNS1m maleexontig00000049_pilon 877372..878502 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra939.t1.stop1Ggra939.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000049_pilon 878500..878502 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra939.t1Ggra939.t1Gracilaria gracilis GNS1m malepolypeptidetig00000049_pilon 877372..878502 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra939.t1 ID=Ggra939.t1|Name=Ggra939.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=377bp
MVIVEFPSPTVSVAITLISALVELLLLNAIKNLNAIYECALLKRHRLVRI
RSHMRRIRIVNVLVLIFFLALEAIYSTYSSPITTKTQLVEACVSVRPSVQ
TRFEQHQFWAEARTTVGSCLTVEGDVVSIRIGNYSVDSENMRVSCSKEVY
FRFRINDTRELSTADSTLSCVPTEIEDYCVRAKIGENKNNNYNVLWITDE
YNKYSIMDEKLPFRRTEVLFPVHEHLDFLARRMARNEDRYSIFLRNNVLL
DAVNDSCVFEEEDGVPATSISTPIAIVLVTFWGISLVSFTLTTALNRRRF
YSVGNMLDVACKTRRASDDERYPIANASIRMTVENGSPHFVMCDWEGEQQ
SSEEGGVESPNRVMRDEEVVDLGHES*
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spliced messenger RNA

>Ggra939.t1 ID=Ggra939.t1|Name=Ggra939.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1131bp|location=Sequence derived from alignment at tig00000049_pilon:877372..878502+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGATAGTTGAGTTTCCGTCCCCAACTGTGAGCGTAGCAATCACACT
GATTAGTGCGCTTGTTGAACTTTTGCTACTGAACGCTATCAAGAACTTGA
ACGCTATTTACGAGTGCGCGCTGCTAAAGCGTCATCGTTTGGTTCGAATA
AGGTCTCATATGCGCCGCATCAGGATTGTTAACGTGCTTGTACTCATTTT
CTTTCTCGCGCTCGAAGCAATCTATTCCACTTACTCCTCTCCCATCACCA
CCAAAACGCAGCTAGTCGAGGCCTGCGTCTCCGTGCGGCCAAGTGTGCAG
ACGAGGTTTGAGCAACACCAGTTCTGGGCTGAGGCTCGTACAACGGTGGG
ATCGTGCCTCACAGTGGAAGGCGATGTCGTGTCTATCCGTATCGGAAACT
ATAGCGTCGATTCCGAGAACATGCGCGTGAGCTGCAGTAAGGAGGTTTAC
TTCAGATTCAGAATCAACGACACGCGCGAGCTTTCCACCGCAGATAGTAC
GTTATCGTGTGTGCCCACCGAAATTGAAGACTACTGCGTGAGAGCCAAAA
TCGGCGAAAACAAGAACAACAATTACAATGTACTGTGGATTACGGATGAG
TACAACAAATACTCTATCATGGACGAAAAGCTGCCGTTCAGAAGAACCGA
AGTGCTATTTCCAGTGCACGAGCACTTAGACTTTTTGGCGAGAAGGATGG
CTCGCAATGAGGATCGTTATTCGATCTTCTTGCGCAACAACGTGCTGTTG
GATGCGGTGAACGACAGTTGCGTGTTTGAGGAGGAGGACGGAGTGCCGGC
GACGAGCATTTCGACGCCGATTGCTATCGTACTAGTGACTTTTTGGGGCA
TTTCGCTGGTGTCTTTCACTCTAACAACTGCTCTGAACCGCAGGAGGTTT
TATAGCGTGGGAAATATGTTAGATGTTGCGTGCAAGACGAGGCGAGCGTC
GGATGATGAGCGCTACCCCATCGCCAATGCAAGCATCCGCATGACGGTGG
AGAACGGTTCACCTCATTTTGTGATGTGTGACTGGGAAGGAGAACAGCAG
AGCTCAGAGGAGGGTGGTGTGGAGAGCCCTAACAGAGTGATGAGGGACGA
AGAGGTGGTGGATTTAGGACATGAGTCGTGA
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protein sequence of Ggra939.t1

>Ggra939.t1 ID=Ggra939.t1|Name=Ggra939.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=377bp
MVIVEFPSPTVSVAITLISALVELLLLNAIKNLNAIYECALLKRHRLVRI
RSHMRRIRIVNVLVLIFFLALEAIYSTYSSPITTKTQLVEACVSVRPSVQ
TRFEQHQFWAEARTTVGSCLTVEGDVVSIRIGNYSVDSENMRVSCSKEVY
FRFRINDTRELSTADSTLSCVPTEIEDYCVRAKIGENKNNNYNVLWITDE
YNKYSIMDEKLPFRRTEVLFPVHEHLDFLARRMARNEDRYSIFLRNNVLL
DAVNDSCVFEEEDGVPATSISTPIAIVLVTFWGISLVSFTLTTALNRRRF
YSVGNMLDVACKTRRASDDERYPIANASIRMTVENGSPHFVMCDWEGEQQ
SSEEGGVESPNRVMRDEEVVDLGHES*
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mRNA from alignment at tig00000049_pilon:877372..878502+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra939.t1 ID=Ggra939.t1|Name=Ggra939.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1131bp|location=Sequence derived from alignment at tig00000049_pilon:877372..878502+ (Gracilaria gracilis GNS1m male)
ATGGTGATAGTTGAGTTTCCGTCCCCAACTGTGAGCGTAGCAATCACACT
GATTAGTGCGCTTGTTGAACTTTTGCTACTGAACGCTATCAAGAACTTGA
ACGCTATTTACGAGTGCGCGCTGCTAAAGCGTCATCGTTTGGTTCGAATA
AGGTCTCATATGCGCCGCATCAGGATTGTTAACGTGCTTGTACTCATTTT
CTTTCTCGCGCTCGAAGCAATCTATTCCACTTACTCCTCTCCCATCACCA
CCAAAACGCAGCTAGTCGAGGCCTGCGTCTCCGTGCGGCCAAGTGTGCAG
ACGAGGTTTGAGCAACACCAGTTCTGGGCTGAGGCTCGTACAACGGTGGG
ATCGTGCCTCACAGTGGAAGGCGATGTCGTGTCTATCCGTATCGGAAACT
ATAGCGTCGATTCCGAGAACATGCGCGTGAGCTGCAGTAAGGAGGTTTAC
TTCAGATTCAGAATCAACGACACGCGCGAGCTTTCCACCGCAGATAGTAC
GTTATCGTGTGTGCCCACCGAAATTGAAGACTACTGCGTGAGAGCCAAAA
TCGGCGAAAACAAGAACAACAATTACAATGTACTGTGGATTACGGATGAG
TACAACAAATACTCTATCATGGACGAAAAGCTGCCGTTCAGAAGAACCGA
AGTGCTATTTCCAGTGCACGAGCACTTAGACTTTTTGGCGAGAAGGATGG
CTCGCAATGAGGATCGTTATTCGATCTTCTTGCGCAACAACGTGCTGTTG
GATGCGGTGAACGACAGTTGCGTGTTTGAGGAGGAGGACGGAGTGCCGGC
GACGAGCATTTCGACGCCGATTGCTATCGTACTAGTGACTTTTTGGGGCA
TTTCGCTGGTGTCTTTCACTCTAACAACTGCTCTGAACCGCAGGAGGTTT
TATAGCGTGGGAAATATGTTAGATGTTGCGTGCAAGACGAGGCGAGCGTC
GGATGATGAGCGCTACCCCATCGCCAATGCAAGCATCCGCATGACGGTGG
AGAACGGTTCACCTCATTTTGTGATGTGTGACTGGGAAGGAGAACAGCAG
AGCTCAGAGGAGGGTGGTGTGGAGAGCCCTAACAGAGTGATGAGGGACGA
AGAGGTGGTGGATTTAGGACATGAGTCGTGA
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Coding sequence (CDS) from alignment at tig00000049_pilon:877372..878502+

>Ggra939.t1 ID=Ggra939.t1|Name=Ggra939.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1131bp|location=Sequence derived from alignment at tig00000049_pilon:877372..878502+ (Gracilaria gracilis GNS1m male)
ATGGTGATAGTTGAGTTTCCGTCCCCAACTGTGAGCGTAGCAATCACACT
GATTAGTGCGCTTGTTGAACTTTTGCTACTGAACGCTATCAAGAACTTGA
ACGCTATTTACGAGTGCGCGCTGCTAAAGCGTCATCGTTTGGTTCGAATA
AGGTCTCATATGCGCCGCATCAGGATTGTTAACGTGCTTGTACTCATTTT
CTTTCTCGCGCTCGAAGCAATCTATTCCACTTACTCCTCTCCCATCACCA
CCAAAACGCAGCTAGTCGAGGCCTGCGTCTCCGTGCGGCCAAGTGTGCAG
ACGAGGTTTGAGCAACACCAGTTCTGGGCTGAGGCTCGTACAACGGTGGG
ATCGTGCCTCACAGTGGAAGGCGATGTCGTGTCTATCCGTATCGGAAACT
ATAGCGTCGATTCCGAGAACATGCGCGTGAGCTGCAGTAAGGAGGTTTAC
TTCAGATTCAGAATCAACGACACGCGCGAGCTTTCCACCGCAGATAGTAC
GTTATCGTGTGTGCCCACCGAAATTGAAGACTACTGCGTGAGAGCCAAAA
TCGGCGAAAACAAGAACAACAATTACAATGTACTGTGGATTACGGATGAG
TACAACAAATACTCTATCATGGACGAAAAGCTGCCGTTCAGAAGAACCGA
AGTGCTATTTCCAGTGCACGAGCACTTAGACTTTTTGGCGAGAAGGATGG
CTCGCAATGAGGATCGTTATTCGATCTTCTTGCGCAACAACGTGCTGTTG
GATGCGGTGAACGACAGTTGCGTGTTTGAGGAGGAGGACGGAGTGCCGGC
GACGAGCATTTCGACGCCGATTGCTATCGTACTAGTGACTTTTTGGGGCA
TTTCGCTGGTGTCTTTCACTCTAACAACTGCTCTGAACCGCAGGAGGTTT
TATAGCGTGGGAAATATGTTAGATGTTGCGTGCAAGACGAGGCGAGCGTC
GGATGATGAGCGCTACCCCATCGCCAATGCAAGCATCCGCATGACGGTGG
AGAACGGTTCACCTCATTTTGTGATGTGTGACTGGGAAGGAGAACAGCAG
AGCTCAGAGGAGGGTGGTGTGGAGAGCCCTAACAGAGTGATGAGGGACGA
AGAGGTGGTGGATTTAGGACATGAGTCGTGA
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