Ggra927.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra927.t1
Unique NameGgra927.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length686
Homology
BLAST of Ggra927.t1 vs. uniprot
Match: A0A2V3IWH3 (Immune-associated nucleotide-binding protein 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWH3_9FLOR)

HSP 1 Score: 351 bits (901), Expect = 7.490e-108
Identity = 214/698 (30.66%), Postives = 382/698 (54.73%), Query Frame = 0
Query:    6 IIVELMARGVLAAIGHQFDNTAD-AIEAVKLEVISMKGSMEKFRRDMDEELSHLNDRLDEVFHAIQRLEYTAIREQMINTMESVQDSSVRERVLQVSMVLYSLIHNTEIQEISIQVNRTLAPASSSEE-------GYEEPLISNTIEAVGTTTSASQIAKKVMRLDREGLFSGVDHRAEDPLHIVINSASDENAKKNELIIATGALYILCQTLCVTIQDYRGVYATALGDGTFVQSETSPHDNACHISLRYCWPTPVEFRRVEEFVQDMYEASGEAELSPIIEVI----EERQKELRIRNVYLVGETGEGKSTLGNDLIGTEEFYVSDAGTGTVKICGHLATPRGLLGGTHEVMVWDTPGMNDQQGRDRIYEGLLYQHLTRENTVSTIIIVSKDGSRIPNTLINTMEVYRRAFGDAFTSSICVCIGMNQRKTKETKISAKFNFWANTLCEILRIPEGSLHDKIIFYNADDEEPQPNQERLKQLILNAEVRLTGTGVAILQGLQKMRTAKLKQEEKEAMFRASEEVCEAIRGELWNAPRVRFKRYPNFHGKASSISLEILPLLGTRFRAYFRHYILWKDNEEEE--KAIIFNGIGERAVELLSKKFLTNPEIYHGAKINLLTRYARKHELIVVNVGSKTRKARRGKIQEQTYNLLHLEDELDTSVYDEVDEILRVITVHPHYAA----TFGTFIPETEE 685
            II+EL+ +G+    G     T+D ++E  + EV+ +KG +E  R   D+ +  +N ++  +  AI+   Y +++  M+ T+ + QD++V+ R++ + M++Y L++   + +I I V++      S ++       G+  P I +    +   +S  +I  ++ +L+   +FS V H  ED +++ I + + +++++N+ I+ TG LY LCQ  C +I+D RG YA +  DG   + +     NAC I+L Y WP+P ++      V    +    +    I+E++    E ++ +L ++NVYL+GETGEGKSTL N L G + F VS AGTGT  I G L  P GLL     + V+DTPGMND   +D             ENTVS+I++VSK GSRIP +L  T+ +Y++AFG+AF   + VCIG+N  KTK + +     +W   L +++     S  +++ FYNA  E  Q +++RL++ I  +EV +T  G +IL+G+++++  +     K+ +   S+     ++ E+ ++PRVR   + +   +   +SL +LP    R     + + L  D+  ++  K I F   G +AV +++  FL N ++    +I  L   A+K +L++ ++GSK++  R   ++   Y LL ++DEL+  V+  V+++L  +  +  YA     T G  + E ++
Sbjct:    5 IILELLVKGIA---GLYSAYTSDPSMEETREEVLKIKGIVENMRLKFDKNMETINHQILSIQQAIKTGNYLSVKNTMLTTINA-QDAAVKIRIVNIGMMIYDLVNGPVVDQIEITVSQMKLEVISFDDDEDDEDLGFPTPHIKHV--TMDRASSIQRIISELQKLEELHVFSVVKHDTEDRINVNITTYAKDDSQRNDHILTTGCLYHLCQVFCDSIRDPRGAYAHSTDDGPISRRDEHLKPNACLITLTYNWPSPKQYIDFTNLVGSAMQEMNSSGYEDIVEMLNKWFETKKNDLIVKNVYLLGETGEGKSTLANSLTGNKHFRVSHAGTGTFDISGKLVEPHGLLASRQHIKVYDTPGMNDGHLQDXXXXXXXXXXXXXENTVSSILLVSKTGSRIPYSLRRTLSIYKKAFGNAFKPCLSVCIGLNAEKTKPSVLDEIKAYWVKELSQVVSFEFPS--NRLYFYNAKQEIFQKDRDRLRKAIWESEVFMTRIGHSILEGVKQLQDIRDDTNNKKKLKNDSQSEILRLQNEISSSPRVRIVLHRDAVHEVFGLSLTLLPTRRERILKSLKLFFLQNDSGSDQVRKVIQFRAEGRKAVGIVNWPFL-NGDVEEKYRIRQLLSIAQKKQLVLTSMGSKSKTFRGRNVEVCRYELLDVDDELNDDVFKRVNDVLDSVGSNASYAKGVMETLGNILAECQQ 693          
BLAST of Ggra927.t1 vs. uniprot
Match: A0A2V3IV98 (Immune-associated nucleotide-binding protein 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV98_9FLOR)

HSP 1 Score: 168 bits (425), Expect = 3.550e-40
Identity = 112/378 (29.63%), Postives = 194/378 (51.32%), Query Frame = 0
Query:  290 RIRNVYLVGETGEGKSTLGNDLIGTEEFYVSDAGTGTVKICGHLATPRGLLGGTHEVMVWDTPGMNDQQGRDRIYEGLLYQHLTRENTVSTIIIVSKDGSRIPNTLINTMEVYRRAFGDAFTSSICVCIGMNQRKTKETKISAKFNFWANTLCEIL--RIPEGSLHDKIIFYNADDEEPQPNQERLKQLILNAEVRLTGTGVAILQGLQKMRTAKLKQEEKEAMFRASEEVCEAIRGELWNAPRVRFKRYPNFHGKAS----------SISLEILPLLGTRFRAYFRHYILWKDNEEEEKAIIFNGIGERAVELLSKKFLTNPEIYHGAKINLLTRYARKHELIVVNVGSKTRKARRGKIQEQTYNLLHLEDELDTSV 655
            +++NV+L+G TGEGKSTL N +  +E+F VS A TGT ++   L      +     +MVWDTPGMND++G D  +   L + +TR  T + I+ V K G R+P +L  T   YR++ G++  S +CVC+GMN    ++  + A   +W + L   L   +PE    ++I F++A + + QP  +R ++ I NA VR  G G  + +GL+++R     Q+ ++ M   S+E  +AI  ++ ++  V+  +Y   HG A           S+    + +   R  +  +     + +EE  + I F+G G++AV++L+        +    K+  L   A K  L+VV +  +  ++R        Y  + ++  L T V
Sbjct:  388 QVKNVFLLGLTGEGKSTLANAITKSEQFAVSHASTGTREVSNALVETDEKV----SIMVWDTPGMNDERGSDNYFHKELGRVITRTQTAAAIVYVCKQGGRVPASLKETTIRYRKSLGESLMSCLCVCVGMNATIEEKATLEAITQYWRHELYSTLGYNLPE----ERIFFFDARNTDGQPEFKRFEKWIANASVRRLGVGNTVFEGLRQVRNGTAVQQTRKDMALGSKENVKAITEDV-SSYAVKMIKYSQ-HGTAKVQICLYMTDKSLMDGKIHISKNRLLSRLKR----RTSEEHPRRIEFSGSGDKAVKVLNSVLRGRDNV---EKVAELLYSAEKENLVVVKMHERVDRSRTQTELVFCYAFVDIDSVLSTEV 748          
BLAST of Ggra927.t1 vs. uniprot
Match: A0A1P8AZX7 (Phloem protein 2-A3 n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A1P8AZX7_ARATH)

HSP 1 Score: 60.8 bits (146), Expect = 3.440e-6
Identity = 66/261 (25.29%), Postives = 116/261 (44.44%), Query Frame = 0
Query:  291 IRNVYLVGETGEGKSTLGNDLIGTEEFYVSDAGTGTVKICGHLATPRGLLGGTHEVMVWDTPGMNDQ--QGRDRIYEGLLYQHLTRENTVSTIIIVSKDGSRIPNTLINTMEVYRRAFGDAFTSSICVCIGMNQRKTKETKISAKFNFWANT---LCEILRIPEGSLHDKIIFYNADDEEPQPNQERLKQLILNAEVRLTGTG-----VAILQGLQKMRTAKLKQEEK--EAMFRASEEVCEAIRGELWNAPRVRFKRYPN 539
            I+N+ LVG TG GKS+ GN L+GT++F   +   G   IC      R  +     + V DTPG+ D    G D   E +    +  E   + ++++S  G RI     +T+   +  FG       C+ +       +E   +    F A     L ++LR+  G    K++F N   +E +   E++KQL+   E     TG       + + +++    +L++EE+  E+  RA  E+ E  +  L    +++ +   N
Sbjct:    5 IKNIVLVGRTGNGKSSTGNTLLGTKQFKSKNQAKGVTMICEMY---RAAIQDGPIINVIDTPGLCDSFVPGDDISNEIINCLTMAEEGIHAVLLVLSARG-RISKEEESTVNTLQCIFGSQILD-YCIVVFTGGDDLEEDDQTLDDYFRAGCPEFLTKVLRLCGGR---KVLFDNKSKDEKK-KVEQVKQLLARVENVGEQTGGIPYTYQLHRKIKEENDERLREEERVIESKNRAEAELAEMQQNLLMEKEKLQMEEAKN 256          
BLAST of Ggra927.t1 vs. uniprot
Match: IAN10 (Immune-associated nucleotide-binding protein 10 n=4 Tax=Arabidopsis thaliana TaxID=3702 RepID=IAN10_ARATH)

HSP 1 Score: 60.8 bits (146), Expect = 5.100e-6
Identity = 66/261 (25.29%), Postives = 116/261 (44.44%), Query Frame = 0
Query:  291 IRNVYLVGETGEGKSTLGNDLIGTEEFYVSDAGTGTVKICGHLATPRGLLGGTHEVMVWDTPGMNDQ--QGRDRIYEGLLYQHLTRENTVSTIIIVSKDGSRIPNTLINTMEVYRRAFGDAFTSSICVCIGMNQRKTKETKISAKFNFWANT---LCEILRIPEGSLHDKIIFYNADDEEPQPNQERLKQLILNAEVRLTGTG-----VAILQGLQKMRTAKLKQEEK--EAMFRASEEVCEAIRGELWNAPRVRFKRYPN 539
            I+N+ LVG TG GKS+ GN L+GT++F   +   G   IC      R  +     + V DTPG+ D    G D   E +    +  E   + ++++S  G RI     +T+   +  FG       C+ +       +E   +    F A     L ++LR+  G    K++F N   +E +   E++KQL+   E     TG       + + +++    +L++EE+  E+  RA  E+ E  +  L    +++ +   N
Sbjct:    5 IKNIVLVGRTGNGKSSTGNTLLGTKQFKSKNQAKGVTMICEMY---RAAIQDGPIINVIDTPGLCDSFVPGDDISNEIINCLTMAEEGIHAVLLVLSARG-RISKEEESTVNTLQCIFGSQILD-YCIVVFTGGDDLEEDDQTLDDYFRAGCPEFLTKVLRLCGGR---KVLFDNKSKDEKK-KVEQVKQLLARVENVGEQTGGIPYTYQLHRKIKEENDERLREEERVIESKNRAEAELAEMQQNLLMEKEKLQMEEAKN 256          
BLAST of Ggra927.t1 vs. uniprot
Match: R0IMA5 (AIG1-type G domain-containing protein n=1 Tax=Capsella rubella TaxID=81985 RepID=R0IMA5_9BRAS)

HSP 1 Score: 59.7 bits (143), Expect = 7.210e-6
Identity = 61/232 (26.29%), Postives = 96/232 (41.38%), Query Frame = 0
Query:  291 IRNVYLVGETGEGKSTLGNDLIGTEEFYVSDAGTGTVKIC--GHLATPRGLLGGTHEVMVWDTPGMNDQQGRDRIYEGLLYQHLT-RENTVSTIIIVSKDGSRIPNTLINTMEVYRRAFGDAFTSSICVCIGMNQRKTKETKISAKFNFWA--NTLCEILRIPEGSLHDKIIFYNADDEEPQPNQERLKQ---LILNAEVRLTGTGVAILQGLQ-KMRTAKLKQEEKEAMFR 513
            ++N+ LVG TG GKS  GN LIG E F       G    C      TP GLL     + V DTPG+ D           + + LT  E  +  +++V    +RI     NT+      FG      + V           T+    +      + L  +LR   G    K++F N   +E +   E++KQ   L+ + E +  G   + +  L+ K  + +L +++KE   R
Sbjct:   17 VKNIVLVGRTGNGKSATGNSLIGNEVFISESNAAGVTTTCQTSRAVTPDGLL-----INVIDTPGLFDLSVSAGFISKEIIKCLTLAEGGLHVVVLVLSVKNRITQEEENTLSTLEVLFGSEIVKYLIVLFTGGDELEANTQTFDDYFLQGCPDFLTTVLRECRGR---KVLFDNKTTDEGK-KAEQVKQFHALVASIEEQNDGKPFSHVMQLRIKEESERLMEQQKEVESR 239          
The following BLAST results are available for this feature:
BLAST of Ggra927.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IWH37.490e-10830.66Immune-associated nucleotide-binding protein 4 n=1... [more]
A0A2V3IV983.550e-4029.63Immune-associated nucleotide-binding protein 7 n=1... [more]
A0A1P8AZX73.440e-625.29Phloem protein 2-A3 n=1 Tax=Arabidopsis thaliana T... [more]
IAN105.100e-625.29Immune-associated nucleotide-binding protein 10 n=... [more]
R0IMA57.210e-626.29AIG1-type G domain-containing protein n=1 Tax=Caps... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 270..513
e-value: 1.7E-18
score: 69.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 276..406
IPR006703AIG1-type guanine nucleotide-binding (G) domainPFAMPF04548AIG1coord: 293..476
e-value: 6.6E-9
score: 35.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..685

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:642877..645005 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra927.t1Ggra927.t1Gracilaria gracilis GNS1m malemRNAtig00000049_pilon 642877..645005 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra927.t1 ID=Ggra927.t1|Name=Ggra927.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=686bp
MAASIIIVELMARGVLAAIGHQFDNTADAIEAVKLEVISMKGSMEKFRRD
MDEELSHLNDRLDEVFHAIQRLEYTAIREQMINTMESVQDSSVRERVLQV
SMVLYSLIHNTEIQEISIQVNRTLAPASSSEEGYEEPLISNTIEAVGTTT
SASQIAKKVMRLDREGLFSGVDHRAEDPLHIVINSASDENAKKNELIIAT
GALYILCQTLCVTIQDYRGVYATALGDGTFVQSETSPHDNACHISLRYCW
PTPVEFRRVEEFVQDMYEASGEAELSPIIEVIEERQKELRIRNVYLVGET
GEGKSTLGNDLIGTEEFYVSDAGTGTVKICGHLATPRGLLGGTHEVMVWD
TPGMNDQQGRDRIYEGLLYQHLTRENTVSTIIIVSKDGSRIPNTLINTME
VYRRAFGDAFTSSICVCIGMNQRKTKETKISAKFNFWANTLCEILRIPEG
SLHDKIIFYNADDEEPQPNQERLKQLILNAEVRLTGTGVAILQGLQKMRT
AKLKQEEKEAMFRASEEVCEAIRGELWNAPRVRFKRYPNFHGKASSISLE
ILPLLGTRFRAYFRHYILWKDNEEEEKAIIFNGIGERAVELLSKKFLTNP
EIYHGAKINLLTRYARKHELIVVNVGSKTRKARRGKIQEQTYNLLHLEDE
LDTSVYDEVDEILRVITVHPHYAATFGTFIPETEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR006703G_AIG1