Ggra935.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra935.t2
Unique NameGgra935.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length536
Homology
BLAST of Ggra935.t2 vs. uniprot
Match: A0A2V3J217 (AIG1-type G domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J217_9FLOR)

HSP 1 Score: 251 bits (641), Expect = 2.640e-75
Identity = 133/251 (52.99%), Postives = 173/251 (68.92%), Query Frame = 0
Query:  225 KAQTTLSDNEVATKMPACFMDE--PTAAISEPIRVIVLGNPGVGKSTIQNTLVGEAVFESGISLGGGLTKRIESCAREGWTFVDTPGLDDIYHRNTAAQELSKAFRGPCWAKIVFVTALEAGRVRAADVCTLATIVTALKKAGVEMRDRYALIVNKCEPSLAEKLDNEHYRELRAKVLDPFLLVEKTRQVRTIRLEVGLRGKGGVLFREEENAQLRQLVDRTPKIYFPAKPEVRLDVENFESATQMMDEEL 473
            K ++T SD++  + +      +  P +    P RVIV+GNPGVGKSTIQNTL+ + VFESGISLGGGLTK   +C +   TFVDTPGLDD+Y+R TAA+E+S A RGP   K+VFVTALEAGRVR+ADVCTL TIVTAL++   +M  +Y LI+NKCE SLA+ L  +   ELRA VL P+  VE+ +QV  IR E  +RGK G L   +   +LR L++R P I  PA+P VRL ++ +E   Q +DEE+
Sbjct:   32 KEKSTSSDSQTLSVVSDTEHSQVLPNSETKAPTRVIVIGNPGVGKSTIQNTLLQKTVFESGISLGGGLTKSTATCTKGDLTFVDTPGLDDLYNRRTAAKEISAALRGPSTVKMVFVTALEAGRVRSADVCTLQTIVTALREVVGDMTRKYTLIINKCEDSLAQTLTKKDSLELRASVLGPYFAVEEAKQVEIIRAETSIRGKSGTLLNRQAAERLRGLIERAPTIDLPAEPVVRLKLKTYEKNAQQIDEEM 282          
BLAST of Ggra935.t2 vs. uniprot
Match: A0A2V3J228 (G domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J228_9FLOR)

HSP 1 Score: 177 bits (449), Expect = 1.040e-47
Identity = 96/227 (42.29%), Postives = 138/227 (60.79%), Query Frame = 0
Query:  248 TAAISEPIRVIVLGNPGVGKSTIQNTLVGEAVFESGISLGGGLTKRIESCAREGWTFVDTPGLDDIYHRNTAAQELSKAFRGPCWAKIVFVTALEAGRVRAADVCTLATIVTALKKAGVEMRDRYALIVNKCEPSLAEKLDNEHYR-ELRAKVLDPFLLVEKTRQVRTIRLEVGLRGKGGVLFREEENAQLRQLVDRTPKIYFPAKPEVRLDVENFESATQMMDEEL 473
            T++ + P ++++LGNPGVGKSTI NTL+G    ESG+S+ GGLT    S     + +VDTPG+DD+Y+   A +E+S A RGPC  K+VFVT LE+GRVR+ D+ TLAT++  L+     + DRY LI+NKCE S+   L +E  + + R +VL PF  +    +   IR E    GK  VL R+    +LR ++  TP I  P  P + LD  NF      ++E++
Sbjct:    4 TSSDNLPTKIVLLGNPGVGKSTIYNTLLGRRASESGVSIAGGLTNAARSSPLGRFVYVDTPGIDDVYNCKNATREVSAALRGPCRVKLVFVTTLESGRVRSGDLATLATVLDELRHVVGNIDDRYLLIINKCEDSVYNSLLDEFTKVKTRTRVLAPFKALGGISRFALIRREPTASGKANVLLRDTNIERLRDVIVATPTIKLPYNPILHLDFTNFGHCKNEIEEDI 230          
BLAST of Ggra935.t2 vs. uniprot
Match: A0A2V3J358 (G domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J358_9FLOR)

HSP 1 Score: 129 bits (325), Expect = 1.760e-30
Identity = 67/145 (46.21%), Postives = 97/145 (66.90%), Query Frame = 0
Query:  251 ISEPIRVIVLGNPGVGKSTIQNTLVGEAVFESGISLGGGLTKRIESCAREGWTFVDTPGLDDIYHRNTAAQELSKAFRGPCWAKIVFVTALEAGRVRAADVCTLATIVTALKKAGVEMRDRYALIVNKCEPSLAEKLDNEHYREL 395
            +S    VIV GNPG GKS+I N+++G   FESGISLG GLT  ++S       + DTPGLDD   R+ AA+E+S AFR     K++FV+ LEAGR+R+ D+ T+  IV A++  GV+   ++++I+NKCEP + E L+N+  R +
Sbjct:    1 MSRQEHVIVAGNPGSGKSSILNSIIGRVKFESGISLGSGLTTALDSKRIGNVLYSDTPGLDDARIRDRAAKEISYAFRRGGKIKLIFVSTLEAGRLRSTDLATMRIIVEAIQSVGVDPAKQFSIIINKCEPEVLELLENKKNRAM 145          
BLAST of Ggra935.t2 vs. uniprot
Match: A0A812SP67 (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SP67_9DINO)

HSP 1 Score: 97.8 bits (242), Expect = 2.040e-18
Identity = 56/141 (39.72%), Postives = 80/141 (56.74%), Query Frame = 0
Query:  250 AISEPIRVIVLGNPGVGKSTIQNTLVGEAVFESGISLGGGLTKRIESCAREGWTFVDTPGLDDIYHRNTAAQELSKAFRGPCWAKIVFVTALEAGRVRAADVCTLATIVTALKKAGVEMRDRYALIVNKCEPSLAEKLDNE 390
            A +EP   + +GNPG GKSTI N L+GE  F+SGIS G G+T R +       TF+DTPGL D+  R  AA+ +++A +     KI FV  L+ GRVR  DV T+  ++ A           YA+I+N+      E+L ++
Sbjct:   47 AEAEPTNFLFVGNPGTGKSTILNGLIGELTFQSGISYGEGMTYRFDQVKHGKHTFMDTPGLSDMKRREAAAEAITEALKQDGRYKIFFVITLQNGRVRPEDVTTMNLVLDAAPIT------HYAIIINQMPQREFEELKSD 181          
BLAST of Ggra935.t2 vs. uniprot
Match: A0A1X6NJX7 (G domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJX7_PORUM)

HSP 1 Score: 95.1 bits (235), Expect = 3.350e-18
Identity = 49/126 (38.89%), Postives = 80/126 (63.49%), Query Frame = 0
Query:  256 RVIVLGNPGVGKSTIQNTLVGEAVFESGISLGGGLTKRIESCAREGWTFVDTPGLDDIYHRNTAAQELSKAFRGPCWAKIVFVTALEAGRVRAADVCTLATIVTALKKAGVEMRDRYALIVNKCEP 381
             +I++G+PG GKST+   L G+  F SG+S G G T ++++    G  + DTPGLDD   +  AA+E++ A R     K++FV  LEA R+RA ++ T+ T+V ALK+  V +  ++++++NK  P
Sbjct:    3 HIILIGDPGTGKSTLLTGLTGKP-FASGMSTGTGKTTQLQTEVVNGVRYSDTPGLDDAVTKKRAAEEIAAAVRLGGTVKLLFVVTLEAARIRAGNMATIRTVVDALKEREVRVTGKFSVLINKMTP 127          
BLAST of Ggra935.t2 vs. uniprot
Match: A0A2D4C0W0 (G domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0W0_PYTIN)

HSP 1 Score: 93.2 bits (230), Expect = 1.040e-17
Identity = 50/133 (37.59%), Postives = 79/133 (59.40%), Query Frame = 0
Query:  255 IRVIVLGNPGVGKSTIQNTLVGEAVFESGISLGGGLTKRIESCAREGWTFVDTPGLDDIYHRNTAAQELSKAFRGPCWAKIVFVTALEAGRVRAADVCTLATIVTALKKAGVEMRDRYALIVNKCEPSLAEKL 387
            IR++ +GNPGVGKST  N + G+  F SG+S G GLTK     A + +  VDTPGL D+     AA E+++  R     K++F   LE+GR+   D+ TL+ ++ +L+    + + ++ +++N   PS  EKL
Sbjct:   12 IRIVAIGNPGVGKSTFLNCIAGQPKFRSGLSYGIGLTKTAAMVAIQNFLLVDTPGLCDMTIEKNAAMEITRVLRSGGLFKLLFFVRLESGRLVTDDLVTLSRVMDSLQG---DYQCKFTVVINNILPSTYEKL 141          
BLAST of Ggra935.t2 vs. uniprot
Match: A0A2D4BY40 (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BY40_PYTIN)

HSP 1 Score: 97.4 bits (241), Expect = 1.730e-17
Identity = 59/202 (29.21%), Postives = 100/202 (49.50%), Query Frame = 0
Query:  191 EHPTTLTGHEYTMDPLPVSKQPFAQPSSPTAGKIKAQTTLSDNEVATKMPACFMDEPT--AAISEPI-------RVIVLGNPGVGKSTIQNTLVGEAVFESGISLGGGLTKRIESCAREGWTFVDTPGLDDIYHRNTAAQELSKAFRGPCWAKIVFVTALEAGRVRAADVCTLATIVTALKKAGVEMRDRYALIVNKCEPSL 383
            E P  +   + T  P P++ +   Q        +  +                 DEP+  A +S  I       R + +GNPGVGKST  N L+GEA F+SG+S G GLTK   +  R    ++DTPGL D+    +AA+E+++  +     K+ F   L+AGRV   D+ TL  ++ +++    +++ ++ ++VN   P++
Sbjct:   42 ERPALVDAEQATSQPTPLNGEQVMQDHDGQVSPVDVKKVXXXXXXXXXXXXXXRDEPSTVADVSNDIAPAVAAVRFVAIGNPGVGKSTFLNCLLGEAAFKSGLSYGTGLTKTSSTVKRGDKEYIDTPGLCDVEIEKSAAEEITRVLKSGGRLKLFFFVRLQAGRVVTDDLITLTRVLDSVQG---DLKSKFTIVVNNLLPAI 240          
BLAST of Ggra935.t2 vs. uniprot
Match: B3ERL0 (U-box domain-containing protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) TaxID=452471 RepID=B3ERL0_AMOA5)

HSP 1 Score: 96.7 bits (239), Expect = 3.030e-17
Identity = 64/223 (28.70%), Postives = 116/223 (52.02%), Query Frame = 0
Query:  257 VIVLGNPGVGKSTIQNTLVGEAVFESGISLGGGLTKRIESCAREGWTFVDTPGLDDIYHRNTAAQELSKAFRGPCWAKIVFVTALEAGRVRAADVCTLATIVTALKKAGVEMRDRYALIVNKCEPSLAEKLDNEHYRELRAKVLDPFL--LVEKTRQVRTIRLEVGLRGKGGVLF--REEENAQLRQLVDRTPKIYFPAKPEVRLDVENFESATQMMDEELNQ 475
            ++  GNPGVGKS++ N++  + VF+SG  +G G+T + +        ++DTPGLDD+  R+ AA+E+ KA +     KI+FV  L++GR+R AD+ T+  +  A+K     +   + LI NK  P + ++++ E         L+P+L  LV++      ++ +  +  +  V F    +   +L +   R P      K   R+D+ NF+     ++ +  Q
Sbjct:  326 IVFCGNPGVGKSSLCNSIFQKPVFKSGAMIGKGMTTKEQEFKHVDNLYIDTPGLDDVKLRDKAAEEIEKALKHNDNYKIIFVAMLDSGRIRPADLATVNAVCGAIK-----VPFEFGLIFNKVTPRIIKQINQEG--------LEPYLTTLVKQPISTLILKKDSDMEDEEDVYFPMNSDNRDKLVKFTCRLPGNRILEKDVNRIDITNFQEKVNEIERKYKQ 535          
BLAST of Ggra935.t2 vs. uniprot
Match: D3BAM2 (G domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BAM2_POLPP)

HSP 1 Score: 92.0 bits (227), Expect = 8.190e-17
Identity = 70/232 (30.17%), Postives = 114/232 (49.14%), Query Frame = 0
Query:  254 PIRVIVLGNPGVGKSTIQNTLVGEAVFESGISLGGGLTKRIESCAREGWTFVDTPGLDDIYHRNTAAQELSKAFRGPCWAKIVFVTALEAGRVRAADVCTLATIVTALKKAGVEMRDRYALIVNKCEPSLAEKLDNEHYRELRAKVLDPFLLVEKTR-QVRTIRLEVGLRGKGGVLFREEENAQ-LRQLVDRTPKIYFPAKPEVRLDVENFESATQMMDEELNQRPNQAQQS 483
            P  +   GNPG GKST+ N+L+G   F SG+S+G G+T + ++        VD+PGL D   R   A E+  + +     KI+FV  L++GRV+  D+ TL TI+ ++K         Y LI+NK  P +AEKL     +   A +     +VEK   +   I+    L  +  VL  +    Q L    D+ P      +   +++V +++   + M+ +L +   Q Q+S
Sbjct:    5 PTIISFFGNPGSGKSTLCNSLIGYIAFNSGVSIGQGMTTKSQTFQLGSKIIVDSPGLADPVMRERVAVEIETSLKQNGDYKIIFVVTLDSGRVKVQDLETLNTIIRSIKTPF-----EYGLIINKVTPRVAEKL-----KLCPADLQACIKMVEKMPFETLVIKKINDLEDQDNVLIEDSSIKQELLAFFDKIPSRLIRKEQVGKVEVRDYDKKVKEMETKLTELTQQIQRS 226          
BLAST of Ggra935.t2 vs. uniprot
Match: V9DU24 (G domain-containing protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=V9DU24_PHYPR)

HSP 1 Score: 90.5 bits (223), Expect = 1.650e-16
Identity = 48/121 (39.67%), Postives = 74/121 (61.16%), Query Frame = 0
Query:  258 IVLGNPGVGKSTIQNTLVGEAVFESGISLGGGLTKRIESCAREGWTFVDTPGLDDIYHRNTAAQELSKAFRGPCWAKIVFVTALEAGRVRAADVCTLATIVTALKKAGVEMRD-RYALIVN 377
            + +GNPG GKST+ N LVGE VF++G+S G GLT+ ++    +G  ++DTPGL D   R  AA  ++ A R     KI F+  L+ GRV + D+ T+ T++       ++M D  +A++VN
Sbjct:    6 LFIGNPGTGKSTLLNCLVGEHVFDTGVSYGSGLTRDLQQITHQGAVYMDTPGLADRQVRRRAADAITIALRQAGSCKIFFMVRLQYGRVHSEDLATIETVLD-----SIDMEDIPFAIVVN 121          
The following BLAST results are available for this feature:
BLAST of Ggra935.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2172.640e-7552.99AIG1-type G domain-containing protein n=1 Tax=Grac... [more]
A0A2V3J2281.040e-4742.29G domain-containing protein n=1 Tax=Gracilariopsis... [more]
A0A2V3J3581.760e-3046.21G domain-containing protein n=1 Tax=Gracilariopsis... [more]
A0A812SP672.040e-1839.72Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A1X6NJX73.350e-1838.89G domain-containing protein n=1 Tax=Porphyra umbil... [more]
A0A2D4C0W01.040e-1737.59G domain-containing protein n=1 Tax=Pythium insidi... [more]
A0A2D4BY401.730e-1729.21Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
B3ERL03.030e-1728.70U-box domain-containing protein n=1 Tax=Amoebophil... [more]
D3BAM28.190e-1730.17G domain-containing protein n=1 Tax=Polysphondyliu... [more]
V9DU241.650e-1639.67G domain-containing protein n=3 Tax=Phytophthora p... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 256..340
e-value: 1.5E-8
score: 34.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 228..419
e-value: 7.4E-15
score: 57.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 251..332
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..488
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..504
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:790769..792376 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra935.t2Ggra935.t2Gracilaria gracilis GNS1m malemRNAtig00000049_pilon 790769..792376 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra935.t2 ID=Ggra935.t2|Name=Ggra935.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=536bp
METTKESGSMISSGKGINKSDGHKSESRGDCRGDWEHQQGNTDWVTAEQN
PSYMYPESTSSDLGGKSKDKPSGTDDPSLYVDIAGKIVLPNEECKVQHEV
QDPLDRMNPEEHRTAQEQWSTQHRFAEQQLPALQQYRASQENWAPQGPRV
RQERRTTQESGIPQEGQTPKEHQTPEAIPYPAHLYPQHAQEHPTTLTGHE
YTMDPLPVSKQPFAQPSSPTAGKIKAQTTLSDNEVATKMPACFMDEPTAA
ISEPIRVIVLGNPGVGKSTIQNTLVGEAVFESGISLGGGLTKRIESCARE
GWTFVDTPGLDDIYHRNTAAQELSKAFRGPCWAKIVFVTALEAGRVRAAD
VCTLATIVTALKKAGVEMRDRYALIVNKCEPSLAEKLDNEHYRELRAKVL
DPFLLVEKTRQVRTIRLEVGLRGKGGVLFREEENAQLRQLVDRTPKIYFP
AKPEVRLDVENFESATQMMDEELNQRPNQAQQSAGAGRYKASETGGRKIT
HSQSGFGSERLGRWKSKLRGIISDMLETGVALSIA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP-bd
IPR027417P-loop_NTPase