Ggra926.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra926.t1
Unique NameGgra926.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length729
Homology
BLAST of Ggra926.t1 vs. uniprot
Match: A0A2V3IV98 (Immune-associated nucleotide-binding protein 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV98_9FLOR)

HSP 1 Score: 167 bits (422), Expect = 1.330e-39
Identity = 102/320 (31.87%), Postives = 165/320 (51.56%), Query Frame = 0
Query:  298 SVVIWDTPGMNDQNGMDSAFHKILVKRIRENVTVSSVVLVSKDGVRVPHSLIQAVSSYRESFGESFMRGLCVCIGINQQKTDHTKLQRRRRLWVRSLAAVLRYNFPSERIFCYDATDKDFQPELYRFKEWLINSEVHLPGAGQTIYRGLSQMRNGGPITEAKSNVQLASEEALRSIRTSVASKGLKKIEYDKKG--KHGPGLYFSLKPVDS-----------------SSQENIFDVGITSSGRAASDLLQSVDWKQKLYGTSKKDKLLDFLKGLDLNTFALMEKVRKVIPDRRKDTVQIHYLLWDMSSEFTKELSQTVD 598
            S+++WDTPGMND+ G D+ FHK L + I    T +++V V K G RVP SL +    YR+S GES M  LCVC+G+N    +   L+   + W   L + L YN P ERIF +DA + D QPE  RF++W+ N+ V   G G T++ GL Q+RNG  + + + ++ L S+E +++I   V+S  +K I+Y + G  K    LY + K +                   +S+E+   +  + SG  A  +L SV     L G    +K+ + L   +     +++   +V   R +  +   Y   D+ S  + E+ + ++
Sbjct:  439 SIMVWDTPGMNDERGSDNYFHKELGRVITRTQTAAAIVYVCKQGGRVPASLKETTIRYRKSLGESLMSCLCVCVGMNATIEEKATLEAITQYWRHELYSTLGYNLPEERIFFFDARNTDGQPEFKRFEKWIANASVRRLGVGNTVFEGLRQVRNGTAVQQTRKDMALGSKENVKAITEDVSSYAVKMIKYSQHGTAKVQICLYMTDKSLMDGKIHISKNRLLSRLKRRTSEEHPRRIEFSGSGDKAVKVLNSV-----LRGRDNVEKVAELLYSAEKENLVVVKMHERVDRSRTQTELVFCYAFVDIDSVLSTEVKRKLE 753          
BLAST of Ggra926.t1 vs. uniprot
Match: A0A2V3IWH3 (Immune-associated nucleotide-binding protein 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWH3_9FLOR)

HSP 1 Score: 123 bits (308), Expect = 2.000e-25
Identity = 161/699 (23.03%), Postives = 286/699 (40.92%), Query Frame = 0
Query:    1 MAEVSLFNSMLDGFMSILSATLEDEGIQAVVERGEKEIRQFSGIISE-RLREDADEFGSRMESVCKGVKRLP--LKQGNR---QRSIRTTTSAREGRPGISDLSVTAFVIFKETN---IDRIQVTVVRTK--------KQNEGVIISPSP----VSLTSNDTIHRLLWKITQLSNNLRLFTSDDLKMERDVTEPTVYIHALTRGQVHDIINLAFATGSLYRFCQQFCQVIGRTKGVILKSEGEGEILRISEVGAIDHYHVVLRHDWPNVFLRKRCANRRIPEKKKEPGSS------------YQPEGN-----------EEGQTKSQLLPEAVDTGRTR------------------------DQSVVIWDTPGMNDQNGMDSAFHKILVKRIRENVTVSSVVLVSKDGVRVPHSLIQAVSSYRESFGESFMRGLCVCIGINQQKTDHTKLQRRRRLWVRSLAAVLRYNFPSERIFCYDATDKDFQPELYRFKEWLINSEVHLPGAGQTIYRGLSQMRNGGPITEAKSNVQLASEEALRSIRTSVASKGLKKIEYDKKGKHGP-GLYFSLKPV----------------DSSSQENIFDVGITSSGRAASDLLQSVDWKQKLYGTSKKDKLLDFLKGLDLNTFALMEKVRKVIPDRRKDTVQIHYLLWDMSSEFTKELSQTVDHAL-----NASLGDGI 609
            M E  +   ++ G   + SA   D  ++   E    E+ +  GI+   RL+     F   ME++   +  +   +K GN    + ++ TT +A++    I  +++   +I+   N   +D+I++TV + K         +++  +  P+P    V++    +I R++ ++ +L   L +F+      E D     +  +A    Q +D I     TG LY  CQ FC  I   +G    S  +G I R  E    +   + L ++WP+        N  +    +E  SS            ++ + N           E G+ KS L          R                         Q + ++DTPGMND +  D               TVSS++LVSK G R+P+SL + +S Y+++FG +F   L VCIG+N +KT  + L   +  WV+ L+ V+ + FPS R++ Y+A  + FQ +  R ++ +  SEV +   G +I  G+ Q+++    T  K  ++  S+  +  ++  ++S    +I   +   H   GL  +L P                 DS S +    +   + GR A  +   V+W        +K ++   L         L     K    R ++     Y L D+  E   ++ + V+  L     NAS   G+
Sbjct:    1 MNEGIILELLVKGIAGLYSAYTSDPSMEETRE----EVLKIKGIVENMRLK-----FDKNMETINHQILSIQQAIKTGNYLSVKNTMLTTINAQDAAVKIRIVNI-GMMIYDLVNGPVVDQIEITVSQMKLEVISFDDDEDDEDLGFPTPHIKHVTMDRASSIQRIISELQKLEE-LHVFSVVKHDTE-DRINVNITTYAKDDSQRNDHI---LTTGCLYHLCQVFCDSIRDPRGAYAHSTDDGPISRRDEHLKPNACLITLTYNWPSPKQYIDFTNL-VGSAMQEMNSSGYEDIVEMLNKWFETKKNDLIVKNVYLLGETGEGKSTLANSLTGNKHFRVSHAGTGTFDISGKLVEPHGLLASRQHIKVYDTPGMNDGHLQDXXXXXXXXXXXXXENTVSSILLVSKTGSRIPYSLRRTLSIYKKAFGNAFKPCLSVCIGLNAEKTKPSVLDEIKAYWVKELSQVVSFEFPSNRLYFYNAKQEIFQKDRDRLRKAIWESEVFMTRIGHSILEGVKQLQDIRDDTNNKKKLKNDSQSEILRLQNEISSSPRVRIVLHRDAVHEVFGLSLTLLPTRRERILKSLKLFFLQNDSGSDQVRKVIQFRAEGRKAVGI---VNWPFLNGDVEEKYRIRQLLSIAQKKQLVLTSMGSKSKTFRGRNVEVCRYELLDVDDELNDDVFKRVNDVLDSVGSNASYAKGV 680          
The following BLAST results are available for this feature:
BLAST of Ggra926.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IV981.330e-3931.88Immune-associated nucleotide-binding protein 7 n=1... [more]
A0A2V3IWH32.000e-2523.03Immune-associated nucleotide-binding protein 4 n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 263..416
e-value: 3.7E-5
score: 25.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 708..728
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..288
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 694..728
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 658..662
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 663..693
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..630
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 631..657
NoneNo IPR availableTMHMMTMhelixcoord: 631..653
NoneNo IPR availableTMHMMTMhelixcoord: 660..682

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:638909..641810 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra926.t1Ggra926.t1Gracilaria gracilis GNS1m malemRNAtig00000049_pilon 638909..641810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra926.t1 ID=Ggra926.t1|Name=Ggra926.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=729bp
MAEVSLFNSMLDGFMSILSATLEDEGIQAVVERGEKEIRQFSGIISERLR
EDADEFGSRMESVCKGVKRLPLKQGNRQRSIRTTTSAREGRPGISDLSVT
AFVIFKETNIDRIQVTVVRTKKQNEGVIISPSPVSLTSNDTIHRLLWKIT
QLSNNLRLFTSDDLKMERDVTEPTVYIHALTRGQVHDIINLAFATGSLYR
FCQQFCQVIGRTKGVILKSEGEGEILRISEVGAIDHYHVVLRHDWPNVFL
RKRCANRRIPEKKKEPGSSYQPEGNEEGQTKSQLLPEAVDTGRTRDQSVV
IWDTPGMNDQNGMDSAFHKILVKRIRENVTVSSVVLVSKDGVRVPHSLIQ
AVSSYRESFGESFMRGLCVCIGINQQKTDHTKLQRRRRLWVRSLAAVLRY
NFPSERIFCYDATDKDFQPELYRFKEWLINSEVHLPGAGQTIYRGLSQMR
NGGPITEAKSNVQLASEEALRSIRTSVASKGLKKIEYDKKGKHGPGLYFS
LKPVDSSSQENIFDVGITSSGRAASDLLQSVDWKQKLYGTSKKDKLLDFL
KGLDLNTFALMEKVRKVIPDRRKDTVQIHYLLWDMSSEFTKELSQTVDHA
LNASLGDGIGVGSIGSGSGIGVERMVVRRGVVVGALVVGGLVVGGLVVGG
LVVGGLVVGGLVVGGLVVGGLVVGGLVAGGLVAGGLVIGGLVVGGLVKPV
SDAVETVEAGGGGSGRRNSAPTPTGRGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase