Ggra924.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra924.t1
Unique NameGgra924.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length360
Homology
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BLAST of Ggra924.t1 vs. uniprot
Match: A0A2V3IZ72 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ72_9FLOR)

HSP 1 Score: 68.6 bits (166), Expect = 4.190e-9
Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 0 
Query:   20 DPYQLYELRRPYDRASNVVPQLPRQPDYAHTRLRYRRIISSSPANSPSSVPPEANFPAAFR 80
            DPYQ+Y LRRP++RAS+VVPQLP+QP+ A TRLRYRRI +++ + S  S+    +FPA F+
Sbjct:   24 DPYQVYTLRRPHERASSVVPQLPKQPEMAETRLRYRRIPAAARSGSFGSL--GNHFPARFQ 82
The following BLAST results are available for this feature:
BLAST of Ggra924.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZ724.190e-957.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:546623..547702 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra924.t1Ggra924.t1Gracilaria gracilis GNS1m malemRNAtig00000049_pilon 546623..547702 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra924.t1 ID=Ggra924.t1|Name=Ggra924.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=360bp
MSFFTKTTSARLRAQPSHVDPYQLYELRRPYDRASNVVPQLPRQPDYAHT
RLRYRRIISSSPANSPSSVPPEANFPAAFRPARAYSFSSSDLSSFSFTSK
SSGVRADKAGIPIVTRKGGLRRCIQHVNRVSPFRRSFRRTTEIDTLRMNK
HEAAKDISSDFDISSDEDEPSFEEYRERRRNSLALPSSPLNQDNRLTRMN
TAPVVIGDLHKPAENDFKFKSPSSHPTRPFSLLHKKPAPKLEQRRFTPRE
SFPCTAQNSSPDRVHRTYSAHSPNNECDRPLPNPPMQSNKAFSNLSQFSL
KDADHREAYIRHSRTFYVSTMDPNELSVSFVLPEPKNKSSNKLLRKVMHA
FHAVRIRAA*
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