Ggra915.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra915.t1
Unique NameGgra915.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length395
Homology
The following BLAST results are available for this feature:
BLAST of Ggra915.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 372..394
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 350..372
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 373..394
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 152..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 185..269
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 331..349
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 306..330
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 93..121
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..92
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..18
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 295..305
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..56
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 270..294
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 350..372
NoneNo IPR availableTMHMMTMhelixcoord: 270..292
NoneNo IPR availableTMHMMTMhelixcoord: 34..56
NoneNo IPR availableTMHMMTMhelixcoord: 125..147
NoneNo IPR availableTMHMMTMhelixcoord: 304..326
NoneNo IPR availableTMHMMTMhelixcoord: 163..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:374497..375681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra915.t1Ggra915.t1Gracilaria gracilis GNS1m malemRNAtig00000049_pilon 374497..375681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra915.t1 ID=Ggra915.t1|Name=Ggra915.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=395bp
MSTLLALPPSLPPRAARAACDDFQFDAPPDVPRVPTALVLLASVLLALLV
LVDRVLLRVSKPRRQRAFVALFSVAFVLSLPPVLDSFFSLAANAVTYSSN
SVQFSSLQSCFGDILPRGFNPLLSLMVVLVLRLVATLTELAVILFGVYED
YRLPKQRVAKRRLALGSVVLFASLFVGALVFIRLRFSGFGCRYDGEVGRY
VCFTQPTAQSVHETFMIPLDVLGTCDHLNELVLSSTSLSSSPTECNPDSL
QTAIQSLFQLVVQSGLSNSFLIASMFVAAFSLIAALVYGLFVAHRFQKNT
TLSLRWVLTSLFMIGFSNSLSVFLFVRLVLDGRDQRKVLACGCVGSSFDI
DWSTLLVKFYSFIASFSILITFSKVEKEIDEAQNEVHNHNTDST*
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