Ggra952.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra952.t1
Unique NameGgra952.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length495
Homology
The following BLAST results are available for this feature:
BLAST of Ggra952.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..373
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..331
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..148
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..494
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..169
NoneNo IPR availableTMHMMTMhelixcoord: 149..168
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:915967..917530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra952.t1Ggra952.t1Gracilaria gracilis GNS1m malemRNAtig00000049_pilon 915967..917530 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra952.t1 ID=Ggra952.t1|Name=Ggra952.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=495bp
MTGSETRARTLLAALLLGLALAAAGVALWSLSALQTRLQEDRLTAQAIAL
AETLALQVDTGVPLSDATGFSGGARTLLTSDSALSRVALLDAEGELVASA
GADQPCTMRCLDVDVRSRNPQVGAISEIGDLRLTLAPPAAFRLSGVDPLA
LAAIAALALIGVIYFVSIADPQPQLLPAQLLPALQPRSAHAQCAQHARLQ
PSAVAPTVTPPPSVSPPPSVSPPPSRSPRAARAKRVPLSTPAPSPSLSPS
FSLPASAAGAPSVSVSPPAWLSVSPSPSAPVSPSSAASSSPSAGASASPS
SSVSVSPSANASESPTPSPSPSGSVSPSVSASESPSPWPSLSVSPSSSVS
VSPSVSASESPTPSPSPPDQQCRLVVTDDNEPVVRTRCRCGPMLRESDVV
RTTIVGPQQCVMGCLSDNTQLITECRNARQQEPEQSRFDDFLSLLNDLED
GPLKQCCELTCDGTLTDPEGPTYQCTIPVEEAIMPADPISVPAQ*
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