Ggra901.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra901.t1
Unique NameGgra901.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length245
Homology
The following BLAST results are available for this feature:
BLAST of Ggra901.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038595LURP-one-related superfamilyGENE3D2.40.160.200coord: 51..230
e-value: 2.9E-9
score: 38.7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:186318..187052 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra901.t1Ggra901.t1Gracilaria gracilis GNS1m malemRNAtig00000049_pilon 186318..187052 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra901.t1 ID=Ggra901.t1|Name=Ggra901.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=245bp
MPHSSRLPPSALTVSAASSAGDAATAASAGASGAHNALKRGNTAIAPDMF
LRFSFKRPVRLRIESKKGSDFEVTEVGSRRRLFRILHKGSRATGTVCLFD
GDEQLVYKLKTFAFRLPFYVQVVDGVTKEPVATVIKKSAGHSLHVGNGHN
KKQFFMSIDANLKLNTFSTSMATVNTFQMLNVRSGAVVASGHRLSSKMGY
ELHVTPGHNVALLTMLTLSLQQYYTDHKITGSLKRRFLKRFFSH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038595LOR_sf