Ggra6019.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6019.t1
Unique NameGgra6019.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length362
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:150947..152032 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6019Ggra6019Gracilaria gracilis GNS1m malegenetig00000045_pilon 150947..152032 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6019.t1.stop1Ggra6019.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000045_pilon 150947..150949 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6019.t1.CDS1Ggra6019.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000045_pilon 150947..152032 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6019.t1.exon1Ggra6019.t1.exon1Gracilaria gracilis GNS1m maleexontig00000045_pilon 150947..152032 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6019.t1.start1Ggra6019.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000045_pilon 152030..152032 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6019.t1Ggra6019.t1Gracilaria gracilis GNS1m malepolypeptidetig00000045_pilon 150947..152032 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6019.t1 ID=Ggra6019.t1|Name=Ggra6019.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=362bp
MIVIPLKSQYVSLFISFISAASEIVFLLAVLNWNCFCECKALQKGKSLTV
RRHLNRTKLVGFTTISIFIIVEILSSFYSGPTLIERKGEAEPCRFLASND
GRENFTSTTFRFSPIVHSCLDADETKIWQNGGNLFEDEGFVVQCSEKLYS
FDRETHFDESLPEDHVVECTSVRIINPQEEEIEIELCSFSYRKGNRVTFS
ELLTRSDLNSVTDKFESIEMWHTDVFFDVSGREREFASRAVFHLSKGEID
EVELRRKVFSTDGEGMCRFKEQVDATEVSSALIYVMVGVWITTLLMFTVS
LLFRSHNFFNMSNPLHWAQRAVMDKDIRGDENPVVSTADLEGNRFVLISC
SPNSEQGGSGA*
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spliced messenger RNA

>Ggra6019.t1 ID=Ggra6019.t1|Name=Ggra6019.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1086bp|location=Sequence derived from alignment at tig00000045_pilon:150947..152032- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATTGTAATTCCCCTAAAGTCGCAGTATGTCAGTCTTTTCATCTCATT
CATCTCTGCCGCCTCTGAGATTGTTTTCTTGCTTGCGGTACTCAACTGGA
ACTGCTTCTGCGAATGCAAGGCGCTTCAGAAAGGAAAAAGTCTCACAGTA
CGCCGCCATTTGAATCGTACAAAGTTAGTGGGCTTCACAACAATCTCCAT
TTTTATCATCGTTGAGATTTTGAGCTCATTCTACAGCGGCCCAACTCTTA
TCGAGAGAAAGGGGGAGGCAGAGCCTTGCAGGTTTCTGGCCTCCAACGAC
GGGCGAGAAAACTTCACGAGTACAACCTTTCGCTTCAGTCCCATTGTTCA
TTCATGTCTTGACGCAGATGAAACCAAGATCTGGCAGAATGGAGGAAATT
TGTTTGAGGATGAAGGATTCGTCGTGCAGTGCTCGGAAAAGCTTTACTCC
TTTGATCGCGAGACTCACTTCGATGAATCGCTACCGGAAGATCACGTTGT
GGAATGCACGTCAGTTCGGATAATAAATCCCCAAGAGGAAGAAATAGAAA
TAGAACTCTGTTCATTTTCTTATCGAAAAGGAAATCGAGTTACCTTCTCA
GAGTTACTAACACGAAGTGACCTAAACAGTGTCACTGATAAATTTGAAAG
CATCGAAATGTGGCATACGGATGTGTTCTTTGATGTTTCTGGAAGAGAAC
GAGAGTTTGCATCGAGGGCTGTGTTTCATCTGTCCAAGGGTGAAATAGAC
GAAGTAGAGCTGCGTCGCAAGGTGTTCAGCACGGATGGAGAAGGGATGTG
CCGTTTTAAAGAACAGGTCGACGCTACAGAAGTGAGCTCAGCACTCATCT
ACGTGATGGTGGGGGTCTGGATAACAACTTTGCTGATGTTCACAGTTTCA
TTGCTATTTCGCTCTCACAATTTCTTCAATATGAGCAATCCATTACACTG
GGCCCAGAGAGCTGTTATGGACAAAGACATTCGAGGCGATGAAAACCCCG
TAGTGTCCACTGCCGACTTGGAGGGGAATCGGTTCGTGTTGATATCATGT
TCGCCGAACTCAGAGCAGGGTGGAAGTGGCGCATGA
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protein sequence of Ggra6019.t1

>Ggra6019.t1 ID=Ggra6019.t1|Name=Ggra6019.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=362bp
MIVIPLKSQYVSLFISFISAASEIVFLLAVLNWNCFCECKALQKGKSLTV
RRHLNRTKLVGFTTISIFIIVEILSSFYSGPTLIERKGEAEPCRFLASND
GRENFTSTTFRFSPIVHSCLDADETKIWQNGGNLFEDEGFVVQCSEKLYS
FDRETHFDESLPEDHVVECTSVRIINPQEEEIEIELCSFSYRKGNRVTFS
ELLTRSDLNSVTDKFESIEMWHTDVFFDVSGREREFASRAVFHLSKGEID
EVELRRKVFSTDGEGMCRFKEQVDATEVSSALIYVMVGVWITTLLMFTVS
LLFRSHNFFNMSNPLHWAQRAVMDKDIRGDENPVVSTADLEGNRFVLISC
SPNSEQGGSGA*
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mRNA from alignment at tig00000045_pilon:150947..152032-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6019.t1 ID=Ggra6019.t1|Name=Ggra6019.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1086bp|location=Sequence derived from alignment at tig00000045_pilon:150947..152032- (Gracilaria gracilis GNS1m male)
ATGATTGTAATTCCCCTAAAGTCGCAGTATGTCAGTCTTTTCATCTCATT
CATCTCTGCCGCCTCTGAGATTGTTTTCTTGCTTGCGGTACTCAACTGGA
ACTGCTTCTGCGAATGCAAGGCGCTTCAGAAAGGAAAAAGTCTCACAGTA
CGCCGCCATTTGAATCGTACAAAGTTAGTGGGCTTCACAACAATCTCCAT
TTTTATCATCGTTGAGATTTTGAGCTCATTCTACAGCGGCCCAACTCTTA
TCGAGAGAAAGGGGGAGGCAGAGCCTTGCAGGTTTCTGGCCTCCAACGAC
GGGCGAGAAAACTTCACGAGTACAACCTTTCGCTTCAGTCCCATTGTTCA
TTCATGTCTTGACGCAGATGAAACCAAGATCTGGCAGAATGGAGGAAATT
TGTTTGAGGATGAAGGATTCGTCGTGCAGTGCTCGGAAAAGCTTTACTCC
TTTGATCGCGAGACTCACTTCGATGAATCGCTACCGGAAGATCACGTTGT
GGAATGCACGTCAGTTCGGATAATAAATCCCCAAGAGGAAGAAATAGAAA
TAGAACTCTGTTCATTTTCTTATCGAAAAGGAAATCGAGTTACCTTCTCA
GAGTTACTAACACGAAGTGACCTAAACAGTGTCACTGATAAATTTGAAAG
CATCGAAATGTGGCATACGGATGTGTTCTTTGATGTTTCTGGAAGAGAAC
GAGAGTTTGCATCGAGGGCTGTGTTTCATCTGTCCAAGGGTGAAATAGAC
GAAGTAGAGCTGCGTCGCAAGGTGTTCAGCACGGATGGAGAAGGGATGTG
CCGTTTTAAAGAACAGGTCGACGCTACAGAAGTGAGCTCAGCACTCATCT
ACGTGATGGTGGGGGTCTGGATAACAACTTTGCTGATGTTCACAGTTTCA
TTGCTATTTCGCTCTCACAATTTCTTCAATATGAGCAATCCATTACACTG
GGCCCAGAGAGCTGTTATGGACAAAGACATTCGAGGCGATGAAAACCCCG
TAGTGTCCACTGCCGACTTGGAGGGGAATCGGTTCGTGTTGATATCATGT
TCGCCGAACTCAGAGCAGGGTGGAAGTGGCGCATGA
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Coding sequence (CDS) from alignment at tig00000045_pilon:150947..152032-

>Ggra6019.t1 ID=Ggra6019.t1|Name=Ggra6019.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1086bp|location=Sequence derived from alignment at tig00000045_pilon:150947..152032- (Gracilaria gracilis GNS1m male)
ATGATTGTAATTCCCCTAAAGTCGCAGTATGTCAGTCTTTTCATCTCATT
CATCTCTGCCGCCTCTGAGATTGTTTTCTTGCTTGCGGTACTCAACTGGA
ACTGCTTCTGCGAATGCAAGGCGCTTCAGAAAGGAAAAAGTCTCACAGTA
CGCCGCCATTTGAATCGTACAAAGTTAGTGGGCTTCACAACAATCTCCAT
TTTTATCATCGTTGAGATTTTGAGCTCATTCTACAGCGGCCCAACTCTTA
TCGAGAGAAAGGGGGAGGCAGAGCCTTGCAGGTTTCTGGCCTCCAACGAC
GGGCGAGAAAACTTCACGAGTACAACCTTTCGCTTCAGTCCCATTGTTCA
TTCATGTCTTGACGCAGATGAAACCAAGATCTGGCAGAATGGAGGAAATT
TGTTTGAGGATGAAGGATTCGTCGTGCAGTGCTCGGAAAAGCTTTACTCC
TTTGATCGCGAGACTCACTTCGATGAATCGCTACCGGAAGATCACGTTGT
GGAATGCACGTCAGTTCGGATAATAAATCCCCAAGAGGAAGAAATAGAAA
TAGAACTCTGTTCATTTTCTTATCGAAAAGGAAATCGAGTTACCTTCTCA
GAGTTACTAACACGAAGTGACCTAAACAGTGTCACTGATAAATTTGAAAG
CATCGAAATGTGGCATACGGATGTGTTCTTTGATGTTTCTGGAAGAGAAC
GAGAGTTTGCATCGAGGGCTGTGTTTCATCTGTCCAAGGGTGAAATAGAC
GAAGTAGAGCTGCGTCGCAAGGTGTTCAGCACGGATGGAGAAGGGATGTG
CCGTTTTAAAGAACAGGTCGACGCTACAGAAGTGAGCTCAGCACTCATCT
ACGTGATGGTGGGGGTCTGGATAACAACTTTGCTGATGTTCACAGTTTCA
TTGCTATTTCGCTCTCACAATTTCTTCAATATGAGCAATCCATTACACTG
GGCCCAGAGAGCTGTTATGGACAAAGACATTCGAGGCGATGAAAACCCCG
TAGTGTCCACTGCCGACTTGGAGGGGAATCGGTTCGTGTTGATATCATGT
TCGCCGAACTCAGAGCAGGGTGGAAGTGGCGCATGA
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