Ggra6066.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra6066.t1
Unique Name	Ggra6066.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	386

Homology

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BLAST of Ggra6066.t1 vs. uniprot
Match: A0A2V3IZ98 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ98_9FLOR)

HSP 1 Score: 449 bits (1155), Expect = 2.500e-149
Identity = 253/354 (71.47%), Postives = 276/354 (77.97%), Query Frame = 0

Query:   19 WLRMRSRVSNMHDHAQVARPASSAPALSQXXXXXXXXXXXXXXXXXXXXPHPTRPYQRHSLQREPPHMSEPDPSERRPSRDAPHSPSDDPSTPRRLVTDTSQRAHFVRALLPPPSSHMLHHDCASITQFLRAITLPIDCVPEVADPSFKPHCHLLRRMALHPFELNRYLFAYKPLARVHAVMAATLLAPAHIDSNNFPLSSLLRTAVMYLAGNSYRNVYVMTYAAQLKSIHRSTPPAHGIMPSVLLKGHHLPKSQLIALDFAQQLLSDEFAVSDAVSKRFIDTHANEAAALDRYVAATCAYGAFLSSLTSTLDLELTHAAIQYASSNLQGLPWKSSAAPLNVGFTDDELDQFGT 372
            WLR+RSR+S+MHD  Q   PA  A + +  XXXXXXXXXXX         HP      HSL                     P+SP+  PSTPRRLVTDTS RAHFVRALLPPPSSHMLH +CASITQFLR ITLPI CVP+ AD SFKPH  LLRR  LH FELNRYLFAYKPLARV+AVMAATLL PA ID+NNFP+SSLLRTAVMYLAGNSYRNVYVMTYAAQLKSIHRSTPPA GIMPS+LL+G HL  SQLIALDFAQQ+LSD++AVS+ VS+  ID   +E   LDRYVAATCAYGAFLS LTSTLDLELTHAAIQYAS+NLQGLPWKSS AP+NVGFTDDE+D FGT
Sbjct:   23 WLRIRSRISSMHDQPQPTHPA--AHSTTSVXXXXXXXXXXXLVTSSKTINHP------HSLD--------------------PNSPTH-PSTPRRLVTDTSTRAHFVRALLPPPSSHMLHPNCASITQFLRPITLPIACVPDAADTSFKPHATLLRRTTLHHFELNRYLFAYKPLARVNAVMAATLLYPAQIDTNNFPVSSLLRTAVMYLAGNSYRNVYVMTYAAQLKSIHRSTPPAEGIMPSMLLEGSHLSPSQLIALDFAQQMLSDDYAVSETVSRSIIDVQPSENTMLDRYVAATCAYGAFLSCLTSTLDLELTHAAIQYASNNLQGLPWKSSGAPVNVGFTDDEIDHFGT 347

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BLAST of Ggra6066.t1 vs. uniprot
Match: R7QVB8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QVB8_CHOCR)

HSP 1 Score: 275 bits (702), Expect = 1.050e-82
Identity = 133/258 (51.55%), Postives = 181/258 (70.16%), Query Frame = 0

Query:  114 LVTDTSQRAHFVRALLPPPSSHMLHHDCASITQFLRAITLPIDCVPEVADPSFKPHCHLLRRMALHPFELNRYLFAYKPLARVHAVMAATLLAPAHIDSNNFPLSSLLRTAVMYLAGNSYRNVYVMTYAAQLKSIHRSTPPAHGIMPSVLLKGHHLPKSQLIALDFAQQLLSDEFAVSDAVSKRFIDTHANEAAALDRYVAATCAYGAFLSSLTSTLDLELTHAAIQYASSNLQGLPWKSSAAPLNVGFTDDELDQFG 371
            + +D+S++   VR L P P   MLH +CAS+T FLR+  +P+ C PE  D +FK H  L+R+  L  F+LNRYLFAYKPLAR +AV+A+ LL+   ID  +FPLS  LR+AVMY+AGN++ +V+VMTYAAQLKSI RS PP  GI+P+++L+G HL   ++ ALDFAQ+L      VS++  +R I+  A     L+R V++  +Y AFL+ LTST+D+ L H +I YA+ NL  LPWKSS AP+NVGF DDE+  FG
Sbjct:    2 MTSDSSRKRRPVRPLSPAPRPAMLHKNCASVTDFLRSAAVPVGCQPESVDTAFKAHTSLMRKSTLDSFDLNRYLFAYKPLARANAVLASALLSIVEIDQKHFPLSPALRSAVMYVAGNAHHSVFVMTYAAQLKSIMRSRPPTEGILPAIVLEGRHLTDKEIAALDFAQELSGANAVVSESTRRRVINGDAESDGRLERLVSSASSYAAFLACLTSTVDMALPHGSITYATKNLDCLPWKSSGAPVNVGFLDDEMGDFG 259

The following BLAST results are available for this feature:

BLAST of Ggra6066.t1 vs. uniprot

BLAST of Ggra6066.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IZ98	2.500e-149	71.47	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QVB8	1.050e-82	51.55	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..73

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000045_pilon	contig	tig00000045_pilon:453712..454869 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra6066.t1	Ggra6066.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000045_pilon 453712..454869 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra6066.t1 ID=Ggra6066.t1|Name=Ggra6066.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=386bp
MPPAVQQPAREPPRARKAWLRMRSRVSNMHDHAQVARPASSAPALSQALT
SSASLSTSATVVTSSTVPHPTRPYQRHSLQREPPHMSEPDPSERRPSRDA
PHSPSDDPSTPRRLVTDTSQRAHFVRALLPPPSSHMLHHDCASITQFLRA
ITLPIDCVPEVADPSFKPHCHLLRRMALHPFELNRYLFAYKPLARVHAVM
AATLLAPAHIDSNNFPLSSLLRTAVMYLAGNSYRNVYVMTYAAQLKSIHR
STPPAHGIMPSVLLKGHHLPKSQLIALDFAQQLLSDEFAVSDAVSKRFID
THANEAAALDRYVAATCAYGAFLSSLTSTLDLELTHAAIQYASSNLQGLP
WKSSAAPLNVGFTDDELDQFGTPRIIPLMGPRASP*