Ggra6065.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6065.t1
Unique NameGgra6065.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length364
Homology
BLAST of Ggra6065.t1 vs. uniprot
Match: A0A2V3IZ98 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ98_9FLOR)

HSP 1 Score: 602 bits (1552), Expect = 1.260e-209
Identity = 306/364 (84.07%), Postives = 334/364 (91.76%), Query Frame = 0
Query:    1 MSHFLSYSIRAPKIIGDVNRVTENWMNNAQIPPPGQLFEANDFICHIFGFEPFYFSTLAIAGEAMRRAFLYGCTELLFGERDIPRRLKFILCYVLSSGKERRRIDTDHTKSFERQGLHNGRSITSVYKQRPYDALSIMSAHAAYLACKYGSCAAELVAATDVSRVRSAMERYQNRSDINMHTRLADFPLPRRDCAAVLLAHALLQESPCISEAELLAFETSF-CSAKDTDQTSRNSRRAFLEVLGTACMWSSLERYATGVLAFDIDCTSNLVFGTGRAEPTITEFCQSVEGKKIGLSLAVGDDGRLERTRSDPKATRAQSLRSATRSKKRLHRKRTSSVLSTGLRVARMFSSDELRSRESPAVA 363
            +SHFLS SI APKII DVNRVTENWM+NA +PPPGQLF+ANDFI HIFGFEPFYFSTLA+AGE+MRRAFLYGCTELLFGERDIPRRLKFI+CYVLSSGKERRRID DHTKSFERQG+HNGRSITSVY QRPYDALSIMSAHAAYLACKYGSCAAELVAA+DVSRVRSAM+RYQ   D ++HTRL DFPLPRRDCAA+LLAH+LLQESPCIS+ +LLAFE SF    K+++Q    SRRAFLEVLGTACMWSSLERYATGVLAFDIDC+SNLVFG GRAEPTITEFC+SVEGK+IGLSLAVGD+ +L R RSDPKATR QSLRS  RS+KRLHRKRTSSVLSTGLR+ARMFSSD+LRS+ES AVA
Sbjct:  391 VSHFLSCSILAPKIIADVNRVTENWMSNAHLPPPGQLFDANDFIAHIFGFEPFYFSTLAMAGESMRRAFLYGCTELLFGERDIPRRLKFIICYVLSSGKERRRIDRDHTKSFERQGVHNGRSITSVYSQRPYDALSIMSAHAAYLACKYGSCAAELVAASDVSRVRSAMDRYQVHPDASIHTRLVDFPLPRRDCAAILLAHSLLQESPCISDVDLLAFENSFGVGPKESEQGGTASRRAFLEVLGTACMWSSLERYATGVLAFDIDCSSNLVFGMGRAEPTITEFCKSVEGKRIGLSLAVGDEDKLMRARSDPKATRTQSLRSGIRSRKRLHRKRTSSVLSTGLRMARMFSSDDLRSKESQAVA 754          
BLAST of Ggra6065.t1 vs. uniprot
Match: R7QVB8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QVB8_CHOCR)

HSP 1 Score: 429 bits (1103), Expect = 6.340e-143
Identity = 221/359 (61.56%), Postives = 278/359 (77.44%), Query Frame = 0
Query:    1 MSHFLSYSIRAPKIIGDVNRVTENWMNNAQIPPPGQLFEANDFICHIFGFEPFYFSTLAIAGEAMRRAFLYGCTELLFGERDIPRRLKFILCYVLSSGKERRRI-DTDHTKSFERQGLHNGRSITSVYKQRPYDALSIMSAHAAYLACKYGSCAAELVAATDVSRVRSAMERYQNRSDINMHTRLADFPLPRRDCAAVLLAHALLQESPCISEAELLAFETSFCS-AKDTDQTSRNSRRAFLEVLGTACMWSSLERYATGVLAFDIDCTSNLVFGTGRAEPTITEFCQSVEGKKIGLSLAVGDDGRLERTRSDPKATRAQSLRSATRSKKRLHRKRTSSVLSTGLRVARMFSSDELRSR 357
            +S F + SI  PK + DVNR+TE+WM  A +PP G+LF+ ND IC +FGF PFYFST A+  E++RRAFL+G  ELLF E+++PRRLKF+LCYVLSSGKER+RI D++H+KSF++QG+HNG SITSVY QR YD+LSIMSAHAA+LACKYG+  AELVAA+D SRVRSAMERY      N  +R   FPL RRDCAA+L+ H+L+Q +P ISE +L +FE++F    KD + +SR SRRA +EVLGTA MWS+ ERYATG LAFDIDCTSN+VFG GRAEPTI+EFC+  EG+KIGLSLA  +   + R RS+ KA+R  SLR  T+S + L+RKRTSS LS+  R+ R+FSS    S+
Sbjct:  302 VSQFFAASIMGPKTVTDVNRITESWMKTAGVPPSGRLFDINDEICSLFGFHPFYFSTAAMERESVRRAFLFGAKELLFSEKEVPRRLKFLLCYVLSSGKERQRIVDSEHSKSFQKQGVHNGHSITSVYSQRQYDSLSIMSAHAAFLACKYGASPAELVAASDASRVRSAMERYDLDPAKNWSSRTIGFPLVRRDCAAILIVHSLMQATPVISERDLRSFESAFAGQTKDPEYSSRPSRRALMEVLGTASMWSAFERYATGTLAFDIDCTSNMVFGNGRAEPTISEFCRGNEGRKIGLSLATSECRDVMRVRSESKASRQSSLRPTTKSARNLYRKRTSSALSSTSRMGRIFSSSTSESQ 660          
The following BLAST results are available for this feature:
BLAST of Ggra6065.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IZ981.260e-20984.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QVB86.340e-14361.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:452543..453634 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6065.t1Ggra6065.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 452543..453634 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6065.t1 ID=Ggra6065.t1|Name=Ggra6065.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=364bp
MSHFLSYSIRAPKIIGDVNRVTENWMNNAQIPPPGQLFEANDFICHIFGF
EPFYFSTLAIAGEAMRRAFLYGCTELLFGERDIPRRLKFILCYVLSSGKE
RRRIDTDHTKSFERQGLHNGRSITSVYKQRPYDALSIMSAHAAYLACKYG
SCAAELVAATDVSRVRSAMERYQNRSDINMHTRLADFPLPRRDCAAVLLA
HALLQESPCISEAELLAFETSFCSAKDTDQTSRNSRRAFLEVLGTACMWS
SLERYATGVLAFDIDCTSNLVFGTGRAEPTITEFCQSVEGKKIGLSLAVG
DDGRLERTRSDPKATRAQSLRSATRSKKRLHRKRTSSVLSTGLRVARMFS
SDELRSRESPAVA*
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