Ggra6168.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6168.t1
Unique NameGgra6168.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length390
Homology
[Close]
BLAST of Ggra6168.t1 vs. uniprot
Match: A0A2V3IGI3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGI3_9FLOR)

HSP 1 Score: 116 bits (290), Expect = 9.620e-28
Identity = 56/73 (76.71%), Postives = 61/73 (83.56%), Query Frame = 0 
Query:  317 FCAPAYTPRQVARAILDEAVGDPNISSKTIASLVEAKQIYKRQPPQSHYRSVRKEILNQMRACRAVDMAALEG 389
            FCAPAYTP QVARAIL+EA  DPNIS+KTI +LV AKQIY+RQPP SHYRSVRKEI+    ACRAVDM  LEG
Sbjct:   11 FCAPAYTPHQVARAILNEAACDPNISAKTIGALVRAKQIYRRQPPDSHYRSVRKEIMRHFNACRAVDMVGLEG 83
The following BLAST results are available for this feature:
BLAST of Ggra6168.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IGI39.620e-2876.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 11..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:804382..805551 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6168.t1Ggra6168.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 804382..805551 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6168.t1 ID=Ggra6168.t1|Name=Ggra6168.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=390bp
MLLDKQESEDVTKQREENKEREGELRRQQARKQQKQRELKAQHQREREQR
QSAVEADISAPHCTDQRHGAESMTSEELRRTWWTERGDGDDADSGDDVHD
DVENEHSDAQIDDIEEFCAANYIHSIPAEFVSSALGSGSVACNPDGDSGE
CDAAVGDTSAIASPHGEFHGDQNISPGPKSGDRSEIRKRQKKASKKRAME
RAKAVLEAELDGSKSWRPKRCVEIKPQVGMSLNFRWQCEQLIRAYTAYIG
VQKGITVAQTLERVTTKCRQANCNAKLTFNWQPRSGLWKLNQFVEHRNEC
CGQDVGSNGDRSCQPKFCAPAYTPRQVARAILDEAVGDPNISSKTIASLV
EAKQIYKRQPPQSHYRSVRKEILNQMRACRAVDMAALEG*
back to top