Ggra6027.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6027.t1
Unique NameGgra6027.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length333
Homology
BLAST of Ggra6027.t1 vs. uniprot
Match: A0A2V3IHL5 (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHL5_9FLOR)

HSP 1 Score: 293 bits (749), Expect = 1.740e-94
Identity = 174/355 (49.01%), Postives = 212/355 (59.72%), Query Frame = 0
Query:    1 MGASSSRHYAPLAVDRPRASPC---------------SSLGSNADACSTSCVDTHLPACNHQQPSSVCKKHTAVACGTHCSDAPIGPPDSRLTPRHDPCNDLVWSASAATTASDDAFDEDDLVPTMFQWNFGGCEVYVAGDWDDWAKKTLMSKNGQQHIALVYIPCGQHQFKYYVDHTWQCAPNLPTCTDSLGNKNNSVTVARPNPQFDMSSPLSDTPPLSPVSSYNQ-TPTSDFPNDAPQLPPFLEERYLKPLPDDMSPDIAIAAQTAAPAWCAAEQPPCQRSLRPFFSHVSVDHLYIARTPESDP-VRCFSHNARHYGKIINTVFVTSADQ----QGDKGTSDS--FHEGHPS 332
            MGA++SRHYAPLA+D P                    + L +   AC+ SC  +  P   H         HT   CG++     + P  S L P           A+A     ++   +DDLVPTMF W+FGG  V+VAG WDDW  KT MSKNGQ H+ALVYIPCGQ QFKY+VD+TWQCAPNLPT TD+ GN NN +T+   +PQFD+S+PL++ PP SP SSY+Q T  S    D P LPPFLE R LKPLPDD+SP +A  +  A       +  P  RS RPFFSHVSVDHLY+AR+  S+P +R FSH +RHYGK+INTVFVTSA Q    Q D    D   F   HPS
Sbjct:    1 MGATTSRHYAPLALDSPPNPTAXXXXXXXXXXXXXTDAPLHAVCSACTRSCHSSSAPCSAHSSALLSSSLHT---CGSNADH--VVPHPSSLHP-----------AAATDAQPEEEPRDDDLVPTMFHWSFGGRHVFVAGAWDDWKLKTPMSKNGQHHMALVYIPCGQFQFKYFVDNTWQCAPNLPTTTDAHGNNNNLITILPVDPQFDVSTPLTEHPPSSPTSSYDQSTLNSSLSTDPPLLPPFLEHRCLKPLPDDISPKVAPLSPHAPSV--ITKHHPQHRSSRPFFSHVSVDHLYVARS--SNPSLRSFSHTSRHYGKLINTVFVTSAPQPQPQQHDARKDDPHRFVSSHPS 335          
BLAST of Ggra6027.t1 vs. uniprot
Match: A0A200PVE1 (5-AMP-activated protein kinase n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200PVE1_9MAGN)

HSP 1 Score: 105 bits (262), Expect = 1.320e-22
Identity = 72/247 (29.15%), Postives = 109/247 (44.13%), Query Frame = 0
Query:   69 PIGPPDSRLTPRHDPCNDLVWSASAATTASDDAFDEDDLVPTMFQWNFGGCEVYVAGDWDDWAKKTLMSKNGQQHIALVYIPCGQHQFKYYVDHTWQCAPNLPTCTDSLGNKNNSVTVARPNPQFDMSSPLSDTPPLSPVSSYNQTP--TSDFPNDAPQLPPFLEERYLKPLPDDMSPDIAIAAQTAAPAWCAAEQPPCQRSLRPFFSHVSVDHLYIARTPESDPVRCFSHNARHYGKIINTVFVTS 313
            P+  PD    P H      V +A    T  +D   E+  +PTM  W+FGG EV V G WD+W  K  + ++G+    +  +P G + +++ VD  W+ AP+LP   D +GN  N + +    P+ D+ S     PP SP SSY  +   + D+  + P +PP L+   L                  AP  C  + P   R       HV+++HLY+ +   S  V  F    R   K +  V   S
Sbjct:   81 PLTKPDEMPIPSHT----FVQNA----TNYEDGLCEEQGIPTMITWSFGGKEVVVEGSWDNWKSKMPLQRSGKDFTIMKVLPSGFYHYRFIVDGEWRYAPDLPWAHDDMGNAYNILDLQDYVPE-DLESISGFEPPQSPESSYTNSHLGSEDYAKEPPLVPPHLQTTLLN-----------------APPSCL-DNPSLSRP-----QHVALNHLYVHKEKSSQSVVAFGSTHRFLAKYVTVVLYKS 295          
BLAST of Ggra6027.t1 vs. uniprot
Match: A0A2K1X8T3 (AMPKBI domain-containing protein n=4 Tax=Saliceae TaxID=238069 RepID=A0A2K1X8T3_POPTR)

HSP 1 Score: 104 bits (259), Expect = 3.140e-22
Identity = 62/208 (29.81%), Postives = 93/208 (44.71%), Query Frame = 0
Query:  108 VPTMFQWNFGGCEVYVAGDWDDWAKKTLMSKNGQQHIALVYIPCGQHQFKYYVDHTWQCAPNLPTCTDSLGNKNNSVTVARPNPQFDMSSPLSDTPPLSPVSSYN--QTPTSDFPNDAPQLPPFLEERYLKPLPDDMSPDIAIAAQTAAPAWCAAEQPPCQRSLRPFFSHVSVDHLYIARTPESDPVRCFSHNARHYGKIINTVFVTS 313
            +PTM  W +GG EV V G WDDW  +  + ++G+ +  +  +P G +Q+++ VD  W+ AP+LP   D  GN  N++ +    P+ D+ S     PP SP SSY+  Q    DF  + P +PP L+   L                   P+ C    PP  R       HV ++HLY+ +      V       R   K +  V   S
Sbjct:  105 IPTMITWTYGGKEVAVEGSWDDWKTRMPLQRSGKDYTIMKVLPSGVYQYRFIVDGQWRYAPDLPWAKDDSGNAYNTLDLQDFVPE-DLESISGFEPPHSPESSYSNLQLSNEDFAKEPPMVPPHLQMTLLN-----------------VPSSCMEIPPPLSRP-----QHVVLNHLYMQKGKSGPAVVALGSTHRFLAKYVTVVLYKS 289          
BLAST of Ggra6027.t1 vs. uniprot
Match: A0A1Q3AVZ8 (AMPKBI domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3AVZ8_CEPFO)

HSP 1 Score: 103 bits (256), Expect = 6.820e-22
Identity = 69/247 (27.94%), Postives = 105/247 (42.51%), Query Frame = 0
Query:   69 PIGPPDSRLTPRHDPCNDLVWSASAATTASDDAFDEDDLVPTMFQWNFGGCEVYVAGDWDDWAKKTLMSKNGQQHIALVYIPCGQHQFKYYVDHTWQCAPNLPTCTDSLGNKNNSVTVARPNPQFDMSSPLSDTPPLSPVSSYN--QTPTSDFPNDAPQLPPFLEERYLKPLPDDMSPDIAIAAQTAAPAWCAAEQPPCQRSLRPFFSHVSVDHLYIARTPESDPVRCFSHNARHYGKIINTVFVTS 313
            P+  PD    P H       W     TT+  +    +  +PTM  W++GG EV V G WDDW  + L+ K+G+    +  +P G + +++ VD  W+  P+ P+  D LGN  N + +    P+ D+ S  S  P  SP SSY+  Q    DF  + P +PP L+   L                   P+      PP  R       HV ++HLY+ +      V     ++R   K +  V   S
Sbjct:   64 PLQRPDEMNIPSHS------WMR---TTSGYEDMSNEQGIPTMITWSYGGREVAVEGSWDDWKSRVLLQKSGKDFTIMKVLPSGVYHYRFVVDGQWRYTPDFPSAQDDLGNAYNILDLQEYVPE-DLESISSFEPAQSPESSYSNLQLGPEDFAKEPPLVPPHLQLTLLN-----------------VPSSSMEIPPPLSRP-----QHVVLNHLYMQKGKSGPSVVALGTSSRFVAKYVTVVLYKS 278          
BLAST of Ggra6027.t1 vs. uniprot
Match: SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CDEBD (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CDEBD)

HSP 1 Score: 100 bits (249), Expect = 7.150e-21
Identity = 62/221 (28.05%), Postives = 99/221 (44.80%), Query Frame = 0
Query:   95 TTASDDAFDEDDLVPTMFQWNFGGCEVYVAGDWDDWAKKTLMSKNGQQHIALVYIPCGQHQFKYYVDHTWQCAPNLPTCTDSLGNKNNSVTVARPNPQFDMSSPLSDTPPLSPVSSYN--QTPTSDFPNDAPQLPPFLEERYLKPLPDDMSPDIAIAAQTAAPAWCAAEQPPCQRSLRPFFSHVSVDHLYIARTPESDPVRCFSHNARHYGKIINTVFVTS 313
            T+  +D ++ +  +PTM  W++GG EV V G WD+W  +  + ++G+    +  +P G +Q+++ VD  W+ AP+LP   D + N  N++ +    P+ D+ S  S  PP SP S Y   Q    DF  + P +PP L+   L                   P+      PP  R       HV ++HLY+ +   S  V       R   K +  V   S
Sbjct:   85 TSGYEDMYNNEQGIPTMITWSYGGKEVSVEGSWDNWKTRIPLQRSGKDFTIMKVLPSGVYQYRFIVDGQWRYAPDLPWAQDDVSNAYNTLDLQDYVPE-DLESISSFEPPQSPDSCYTNLQLGPEDFAKEPPLVPPHLQMTLLN-----------------MPSGAMEIPPPLSRP-----QHVILNHLYMQKGKNSPSVVALGSTDRFLSKYVTVVLYKS 282          
BLAST of Ggra6027.t1 vs. uniprot
Match: A0A7J7D960 (SNF1-related protein kinase regulatory subunit beta-2-like n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7D960_TRIWF)

HSP 1 Score: 99.4 bits (246), Expect = 3.210e-20
Identity = 61/199 (30.65%), Postives = 93/199 (46.73%), Query Frame = 0
Query:  108 VPTMFQWNFGGCEVYVAGDWDDWAKKTLMSKNGQQHIALVYIPCGQHQFKYYVDHTWQCAPNLPTCTDSLGNKNNSVTVARPNPQFDMSSPLSDTPPLSPVSSYN--QTPTSDFPNDAPQLPPFLEERYLKPLPDDMSPDIAIAAQTAAPAWCAAEQPPCQRSLRPFFSHVSVDHLYIARTPESDPVRCFSHNARHYGK 304
            +PTM  W++GG EV V G WD+W  +  + ++G+ +  +  +P G +Q+++ VD  W+ AP+LP   D +GN  N + +    P+ D+ S  S  PP SP +SYN  Q  + DF  + P +PP L+   L                   PA C     P  R       HV ++HLY+ +   S  V       R   K
Sbjct:   99 IPTMITWSYGGKEVAVEGSWDNWKIRVPLQRSGKDYTIMKVLPSGVYQYRFIVDGQWRYAPDLPWAQDDVGNAYNLLDLKDYVPE-DLGSISSFEPPQSPEASYNSLQLGSEDFAKEPPLVPPHLQTTLLN-----------------VPASCMEIPSPLPRP-----QHVVLNHLYMQKGKNSPSVVALGSTHRFRAK 274          
BLAST of Ggra6027.t1 vs. uniprot
Match: A0A2C9VE57 (AMPKBI domain-containing protein n=2 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9VE57_MANES)

HSP 1 Score: 98.2 bits (243), Expect = 6.540e-20
Identity = 61/208 (29.33%), Postives = 93/208 (44.71%), Query Frame = 0
Query:  108 VPTMFQWNFGGCEVYVAGDWDDWAKKTLMSKNGQQHIALVYIPCGQHQFKYYVDHTWQCAPNLPTCTDSLGNKNNSVTVARPNPQFDMSSPLSDTPPLSPVSSYN--QTPTSDFPNDAPQLPPFLEERYLKPLPDDMSPDIAIAAQTAAPAWCAAEQPPCQRSLRPFFSHVSVDHLYIARTPESDPVRCFSHNARHYGKIINTVFVTS 313
            +PTM  W++GG E+ V G WD+W K+  + ++G+ +  +  +P G +Q+++ VD  W+  P+LP   D  GN  N + +    P+ D+ S  S  PP SP SSYN  Q    DF  + P +PP L+   L                   P+      PP  R       HV ++HLY+ +      V       R   K +  V   S
Sbjct:  114 IPTMISWSYGGKEIAVEGSWDNWKKRIPLQRSGKDYSIMKVLPSGVYQYRFIVDGQWRHIPDLPWAQDDNGNAYNILDLQDYVPE-DLESISSFEPPQSPESSYNNMQLGNDDFAKEPPFVPPHLQMTLLN-----------------MPSSYMEIPPPLSRP-----QHVVLNHLYMQKGKGGPAVVALGSTHRFLAKYVTVVLYKS 298          
BLAST of Ggra6027.t1 vs. uniprot
Match: A0A6N2K1L3 (AMPKBI domain-containing protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2K1L3_SALVM)

HSP 1 Score: 99.0 bits (245), Expect = 1.280e-19
Identity = 62/217 (28.57%), Postives = 94/217 (43.32%), Query Frame = 0
Query:  108 VPTMFQWNFGGCEVYVAGDWDDWAKKTLMSKNGQQHIALVYIPCGQHQFKYYVDHTWQCAPNLPTCTDSLGNKNNSVTVARPNPQFDMSSPLSDTPPLSPVSSYN--QTPTSDFPNDAPQLPPFLEERYLKPLPDDMSPDIAIAAQTAAPAWCAAEQPPCQRSLRPFFSHVSVDHLYIARTPESDPVRCFSHNARHYGKIINTVFVTSADQQGDKGT 322
            +PTM  W +GG EV V G WDDW  +  + ++G+ +  +  +P G +Q+++ VD  W+ AP+LP   D  GN  N++ +    P+ D+ S     PP SP SSY+  Q    D+  + P +PP L+   L   P  M                    PP  R       HV ++HLY+ +      V       R   K +  V   S  +     T
Sbjct:  108 IPTMITWAYGGKEVAVEGSWDDWKTRIPLQRSGKDYTIMKVLPSGVYQYRFIVDGQWRYAPDLPWAKDDSGNTYNTLDLQDFVPE-DLESISGFEPPHSPESSYSNLQLSNEDYAKEPPMVPPHLQMTLLNVPPSYME-----------------IPPPLSRP-----QHVVLNHLYMQKGKSGPTVVALGSTHRFSAKYVTVVLYKSLQRHDSAET 301          
BLAST of Ggra6027.t1 vs. uniprot
Match: A0A067KGY8 (AMPKBI domain-containing protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067KGY8_JATCU)

HSP 1 Score: 96.7 bits (239), Expect = 2.400e-19
Identity = 62/221 (28.05%), Postives = 97/221 (43.89%), Query Frame = 0
Query:   95 TTASDDAFDEDDLVPTMFQWNFGGCEVYVAGDWDDWAKKTLMSKNGQQHIALVYIPCGQHQFKYYVDHTWQCAPNLPTCTDSLGNKNNSVTVARPNPQFDMSSPLSDTPPLSPVSSYN--QTPTSDFPNDAPQLPPFLEERYLKPLPDDMSPDIAIAAQTAAPAWCAAEQPPCQRSLRPFFSHVSVDHLYIARTPESDPVRCFSHNARHYGKIINTVFVTS 313
            TT   +   ++  +PTM  W++GG +V V G WD+W  +  + ++G+    +  +P G +Q+++ VD  W+  P+LP   D  GN  N + +    P+ D+ S  S  PP SP SSYN  Q    D+  + P +PP L+   L                   P+      PP  R       HV ++HLY+ +   S  V       R   K +  V   S
Sbjct:  102 TTVGYEEMCDEQGIPTMITWSYGGKDVAVEGSWDNWKTRIPLQRSGKDFTIMKVLPSGVYQYRFIVDRQWKYIPDLPWAQDDSGNAYNVLDLQDYVPE-DLESISSFEPPQSPESSYNNLQLGNDDYAKEPPFVPPHLQMTLLN-----------------MPSSYMEIPPPLSRP-----QHVVLNHLYMQKGKGSPAVVALGSTHRFLAKYVTVVLYKS 299          
BLAST of Ggra6027.t1 vs. uniprot
Match: A0A022QJB6 (AMPKBI domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QJB6_ERYGU)

HSP 1 Score: 95.9 bits (237), Expect = 3.460e-19
Identity = 63/221 (28.51%), Postives = 98/221 (44.34%), Query Frame = 0
Query:   95 TTASDDAFDEDDLVPTMFQWNFGGCEVYVAGDWDDWAKKTLMSKNGQQHIALVYIPCGQHQFKYYVDHTWQCAPNLPTCTDSLGNKNNSVTVARPNPQFDMSSPLSDTPPLSPVSSYN--QTPTSDFPNDAPQLPPFLEERYLKPLPDDMSPDIAIAAQTAAPAWCAAEQPPCQRSLRPFFSHVSVDHLYIARTPESDPVRCFSHNARHYGKIINTVFVTS 313
            ++A+++ ++++  +PTM  W++GG EV V G WDDW  +T + + G+    +  +P G +Q+++ VD  W+ +P+ P   D  GN  N + +    P+ D  S     PP SP SSYN  Q    DF  + P +P  L    L                  AP+     QPP  R       HV ++HLY+ R              R   K +  V   S
Sbjct:   85 SSANEETYNDEQGIPTMITWSYGGKEVSVEGSWDDWKSRTPLQRAGKDFTLMNVLPSGVYQYRFLVDGEWRYSPDQPWEQDDSGNAYNILDLQDYVPE-DTDSISGFEPPQSPDSSYNNYQLGQEDFAKEPPLVPQHLNVTLLN-----------------APSPQMEFQPPYSRP-----QHVVLNHLYMHRDRNRPAFVALGSTNRFLSKYVTVVLYKS 282          
The following BLAST results are available for this feature:
BLAST of Ggra6027.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHL51.740e-9449.01SNF1-related protein kinase regulatory subunit bet... [more]
A0A200PVE11.320e-2229.155-AMP-activated protein kinase n=1 Tax=Macleaya co... [more]
A0A2K1X8T33.140e-2229.81AMPKBI domain-containing protein n=4 Tax=Saliceae ... [more]
A0A1Q3AVZ86.820e-2227.94AMPKBI domain-containing protein n=1 Tax=Cephalotu... [more]
SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CDEBD7.150e-2128.05SNF1-related protein kinase regulatory subunit bet... [more]
A0A7J7D9603.210e-2030.65SNF1-related protein kinase regulatory subunit bet... [more]
A0A2C9VE576.540e-2029.33AMPKBI domain-containing protein n=2 Tax=Crotonoid... [more]
A0A6N2K1L31.280e-1928.57AMPKBI domain-containing protein n=1 Tax=Salix vim... [more]
A0A067KGY82.400e-1928.05AMPKBI domain-containing protein n=1 Tax=Jatropha ... [more]
A0A022QJB63.460e-1928.51AMPKBI domain-containing protein n=1 Tax=Erythrant... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.20.250.60coord: 196..313
e-value: 4.7E-5
score: 25.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..220
NoneNo IPR availableCDDcd02859E_set_AMPKbeta_like_Ncoord: 109..186
e-value: 1.3982E-26
score: 98.44
IPR032640AMP-activated protein kinase, glycogen-binding domainPFAMPF16561AMPK1_CBMcoord: 108..189
e-value: 3.2E-26
score: 91.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 101..190
e-value: 9.5E-22
score: 78.7
IPR043554SNF1-related protein kinase regulatory subunit betaPANTHERPTHR46316SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1coord: 85..236
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 106..186
IPR037256ASC domain superfamilySUPERFAMILY160219AMPKBI-likecoord: 203..311

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:164281..165279 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6027.t1Ggra6027.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 164281..165279 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6027.t1 ID=Ggra6027.t1|Name=Ggra6027.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=333bp
MGASSSRHYAPLAVDRPRASPCSSLGSNADACSTSCVDTHLPACNHQQPS
SVCKKHTAVACGTHCSDAPIGPPDSRLTPRHDPCNDLVWSASAATTASDD
AFDEDDLVPTMFQWNFGGCEVYVAGDWDDWAKKTLMSKNGQQHIALVYIP
CGQHQFKYYVDHTWQCAPNLPTCTDSLGNKNNSVTVARPNPQFDMSSPLS
DTPPLSPVSSYNQTPTSDFPNDAPQLPPFLEERYLKPLPDDMSPDIAIAA
QTAAPAWCAAEQPPCQRSLRPFFSHVSVDHLYIARTPESDPVRCFSHNAR
HYGKIINTVFVTSADQQGDKGTSDSFHEGHPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032640AMPK1_CBM
IPR013783Ig-like_fold
IPR043554KINB
IPR014756Ig_E-set
IPR037256ASC_dom_sf