Ggra6059.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6059.t1
Unique NameGgra6059.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length693
Homology
BLAST of Ggra6059.t1 vs. uniprot
Match: uncharacterized protein LOC123544675 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D827F (uncharacterized protein LOC123544675 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D827F)

HSP 1 Score: 250 bits (639), Expect = 1.020e-68
Identity = 188/663 (28.36%), Postives = 304/663 (45.85%), Query Frame = 0
Query:   16 LPERFDKLSDTLWEPIQRKRQSVGYEVGVLQGPGESSVPQPTRSTDEIVNLVSSDDDDFESPRPSGTQAVGYSESETGIEPPMKGMSNVVKSLMNTVWEGFKKSYFAAYNCEMKSLGVTHQTLGVESAIEWGEAQLVLTDPPFNTRRKRVKRNSGHDVLTEEDMIDTAEATDSVLRPGGHFIIFCSMEQFPQWFKILRETPCQQNQNKPAFRVDPHPMVFIRDAANLNWDPSK-KVGLQPLTKYAIHGVKLGLSNQEQASMTPLEPAGLVPSSFPATKNVLDHVPKPGRGEGLVWRVKEKGSSTFTSQLIRPEQKARIFMGELIARFTKPGDLVADFFSGTFSTGVACVLLPES--RKFLGCEKDEACFTHAKAFATLEFCKMLHDGDTDIVLDQKVVDAASKVHDRVLSTYKRARAEWTAPPGYPPYQTLPRHILQFVEAFCGAPGLVEECVDKNMDEWSSSHRGALHFMCPYTLLVVDATRYRLRIGPSDIKHPKVGRGVFTTGMISEGETFCYFYGTLVYSDLS-GRTERHTTYGSGILGATPRRYKLFSMMVTVGGREFLSLKNRPGEGRDSKESEVYIVPAPFCIAGYINDAGYHAGDEDLALPRSERKRSPNVIIREARPVIQSKSELMKYTLLRVTAKRQIEVGEELYVSYCAEYN 674
            +P   D    TL  P     +++  +VG       +  PQ T+ST + +N+V+                +  + S  G+ P ++   +     +NT+ +   K Y A Y C  + L V+H     E ++  G+ QLVLTDPP+ TR  +   NS HDVLT  D+ D  +    +LRPGGH ++FC +EQ   W   L  +            VD  P+  +R     +  P +    L  + + A+H  KLG + +    M        VPS FP   NV+D++PK    E ++    E+  +      +RPEQK+   M EL++RF+  GD V D F+GT++T  AC+ +P+   R F+GCE D+ C   A+      F  M +   T   +   V DAA  V     S + +   EW  P G P +  LPRH++ +++ FC      ++     +  W       +  +    L  VD  ++   +  S I+  + G G+FT+  + +G+   +++GT+VY  L  G+      YG G L  +  R+K F+M V+V   +F +   R          ++++VP  +C A  IND      +       S+ +RS NV  RE  P    +S L    L ++ A R I+ GEE++  Y  +Y+
Sbjct:  235 IPPALDAFIQTL--PALYSLRAIPPDVGQA-----AETPQNTQSTRKGINVVT----------------LTSASSCVGVSPGVEAKLSTATEALNTL-KAAMKPYAATYACCFRDLVVSHSKEACEDSLV-GKVQLVLTDPPYTTRNLQGLPNSDHDVLTPTDIRDAGDLITKLLRPGGHAVVFCGVEQLNDWKAALGASF--------DMAVDKLPLFAVRAPGAYSQQPFRLTTTLHNMVEVAVHATKLG-AGKRGYEMVSYSNFDCVPSRFPGWCNVIDNIPKLSPAEQIMHTEDERKIA------LRPEQKSLSLMKELVSRFSVVGDTVVDLFAGTYATAEACITMPKGLYRTFVGCEVDKVCHDIAQERLFRAF-GMEYTRGTFGAVHAGVRDAAIAVQTDNRSGWAKTNFEWVQPEGLPVFSCLPRHLVNYLQTFCVDLVFEKDWAAIPLAHWPEDVLRTIEALDSAVLRNVDCLQFGTCVRKSSIE--QAGEGLFTSRAMKKGDILGWYHGTIVYRSLQDGKNNLGRLYGKGCLSCSVDRFKRFAMRVSVTEAQFGNFTGR----------KLFVVPPTYCSASMINDPRTTQNEA------SDTRRSANVEFREE-PFTTPES-LTDPFLCQLVALRDIDAGEEIFGDYGLDYD 836          
BLAST of Ggra6059.t1 vs. uniprot
Match: uncharacterized protein LOC123544288 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4E03 (uncharacterized protein LOC123544288 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4E03)

HSP 1 Score: 250 bits (639), Expect = 1.510e-67
Identity = 188/663 (28.36%), Postives = 304/663 (45.85%), Query Frame = 0
Query:   16 LPERFDKLSDTLWEPIQRKRQSVGYEVGVLQGPGESSVPQPTRSTDEIVNLVSSDDDDFESPRPSGTQAVGYSESETGIEPPMKGMSNVVKSLMNTVWEGFKKSYFAAYNCEMKSLGVTHQTLGVESAIEWGEAQLVLTDPPFNTRRKRVKRNSGHDVLTEEDMIDTAEATDSVLRPGGHFIIFCSMEQFPQWFKILRETPCQQNQNKPAFRVDPHPMVFIRDAANLNWDPSK-KVGLQPLTKYAIHGVKLGLSNQEQASMTPLEPAGLVPSSFPATKNVLDHVPKPGRGEGLVWRVKEKGSSTFTSQLIRPEQKARIFMGELIARFTKPGDLVADFFSGTFSTGVACVLLPES--RKFLGCEKDEACFTHAKAFATLEFCKMLHDGDTDIVLDQKVVDAASKVHDRVLSTYKRARAEWTAPPGYPPYQTLPRHILQFVEAFCGAPGLVEECVDKNMDEWSSSHRGALHFMCPYTLLVVDATRYRLRIGPSDIKHPKVGRGVFTTGMISEGETFCYFYGTLVYSDLS-GRTERHTTYGSGILGATPRRYKLFSMMVTVGGREFLSLKNRPGEGRDSKESEVYIVPAPFCIAGYINDAGYHAGDEDLALPRSERKRSPNVIIREARPVIQSKSELMKYTLLRVTAKRQIEVGEELYVSYCAEYN 674
            +P   D    TL  P     +++  +VG       +  PQ T+ST + +N+V+                +  + S  G+ P ++   +     +NT+ +   K Y A Y C  + L V+H     E ++  G+ QLVLTDPP+ TR  +   NS HDVLT  D+ D  +    +LRPGGH ++FC +EQ   W   L  +            VD  P+  +R     +  P +    L  + + A+H  KLG + +    M        VPS FP   NV+D++PK    E ++    E+  +      +RPEQK+   M EL++RF+  GD V D F+GT++T  AC+ +P+   R F+GCE D+ C   A+      F  M +   T   +   V DAA  V     S + +   EW  P G P +  LPRH++ +++ FC      ++     +  W       +  +    L  VD  ++   +  S I+  + G G+FT+  + +G+   +++GT+VY  L  G+      YG G L  +  R+K F+M V+V   +F +   R          ++++VP  +C A  IND      +       S+ +RS NV  RE  P    +S L    L ++ A R I+ GEE++  Y  +Y+
Sbjct:  491 IPPALDAFIQTL--PALYSLRAIPPDVGQA-----AETPQNTQSTRKGINVVT----------------LTSASSCVGVSPGVEAKLSTATEALNTL-KAAMKPYAATYACCFRDLVVSHSKEACEDSLV-GKVQLVLTDPPYTTRNLQGLPNSDHDVLTPTDIRDAGDLITKLLRPGGHAVVFCGVEQLNDWKAALGASF--------DMAVDKLPLFAVRAPGAYSQQPFRLTTTLHNMVEVAVHATKLG-AGKRGYEMVSYSNFDCVPSRFPGWCNVIDNIPKLSPAEQIMHTEDERKIA------LRPEQKSLSLMKELVSRFSVVGDTVVDLFAGTYATAEACITMPKGLYRTFVGCEVDKVCHDIAQERLFRAF-GMEYTRGTFGAVHAGVRDAAIAVQTDNRSGWAKTNFEWVQPEGLPVFSCLPRHLVNYLQTFCVDLVFEKDWAAIPLAHWPEDVLRTIEALDSAVLRNVDCLQFGTCVRKSSIE--QAGEGLFTSRAMKKGDILGWYHGTIVYRSLQDGKNNLGRLYGKGCLSCSVDRFKRFAMRVSVTEAQFGNFTGR----------KLFVVPPTYCSASMINDPRTTQNEA------SDTRRSANVEFREE-PFTTPES-LTDPFLCQLVALRDIDAGEEIFGDYGLDYD 1092          
BLAST of Ggra6059.t1 vs. uniprot
Match: A0A2V3IE03 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE03_9FLOR)

HSP 1 Score: 212 bits (540), Expect = 2.000e-59
Identity = 116/285 (40.70%), Postives = 164/285 (57.54%), Query Frame = 0
Query:  352 FSGTFSTGVACVLLPESRKFLGCEKDEACFTHAKAFATLEFCKMLHDGDTDIVLDQKVVDAASKVHDRVLSTYKRARAEWTAPPGYPPYQTLPRHILQFVEAFCGAPGLVEECVDKNMDEWSSSHRGALHFMCPYTLLVVDATRYRLRIGPSDIKHPKVGRGVFTTGMISEGETFCYFYGTLVYSDLSGRTERHTTYGSGILGATPRRYKLFSMMVTVGGREFLSLKNRPG----EGRDSKESEVYIVPAPFCIAGYINDAGYHAGDE--DLALPRSERKRSPNV 630
            F+GTFST +AC+ LP+ RKF+GCE D+ACF HA+  A + F  ++ +G TDI   Q++   A  V         R    W A  G+PPYQ LP H++ F+     +  L +    K MD W    +G ++     +LL ++A +Y LR+G S I+H K G GVF T  I+ GE  CYFYGTLVY DLS R E H TYG G++G    R++ +++ + V G++F SL +R       G+ +    +++VPAPFCIAGYIN   Y  GD+  D  +    +KR  NV
Sbjct:    2 FAGTFSTAMACIELPKHRKFVGCEPDKACFEHARHAAIVRFASIIREGHTDIEKSQELGKMARCVSSAFPIGRSRHTVLWRAVNGFPPYQILPPHLVDFLSTLWQSEILRKLGRKKAMDGWPRELQGRMNLENMKSLLAMEAVQYGLRVGKSTIRHEKAGVGVFATRRIAAGEVVCYFYGTLVYHDLSNRKEVHKTYGEGVMGVKKDRFRKYAVKIEVYGQQFQSLPHRKQLTNWHGKQANPI-LWVVPAPFCIAGYINYPKYVEGDKQLDAMVDGLVKKRKGNV 285          
BLAST of Ggra6059.t1 vs. uniprot
Match: A0A2V3IWE9 (DNA adenine methyltransferase YhdJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWE9_9FLOR)

HSP 1 Score: 184 bits (466), Expect = 7.430e-50
Identity = 107/272 (39.34%), Postives = 150/272 (55.15%), Query Frame = 0
Query:  295 LDHVPKPGRGEGLVWRVKEKGSSTFTSQLIRPEQKARIFMGELIARFTKPGDLVADFFSGTFSTGVACVLLPESRKFLGCEKDEACFTHAKAFATLEFCKMLHDGDTDIVLDQKVVDAASKVHDRVLSTYKRARAE-WTAPPGYPPYQTLPRHILQFVEAFCGAPGLVEECVDKNMDEWSSSHRGALHFMCPYTLLVVDATRYRLRIGPSDIKHPKVGRGVFTTGMISEGETFCYFYGTLVYSDLSGRTERHTTYGSGILGATPRRYKLFSM 565
            +D VP     E L+W VK      +T + +RPEQK R  + +LI RF++PGDLV + F+GTFST +ACV LP+ R F+GCE D+ACF HA+  A + F  ++ +G  DI   Q++               K A  E W           +P H  Q+ EA  G P  +     K MD W    +G ++     +LL ++A +Y L +G S I+H K G GVF T  I+ GE  CYFYGTLVY DLS + E H TYG G++G T  R++ +++
Sbjct:    1 MDQVPPMYNSEMLMWSVKTP-DGIYTRKRVRPEQKCRALLKQLICRFSQPGDLVVEMFAGTFSTAMACVELPKHRNFVGCEPDKACFEHARNAAIVRFASIIREGQRDIEKSQEL--------------RKMAHCERWPI--------VIPLHS-QWDEA--GTPWKLGR--KKAMDGWLRELQGRMNLENMKSLLAMEAVQYGLGVGKSTIRHEKAGVGVFATRRIAAGEVVCYFYGTLVYHDLSNQKEVHKTYGEGVMGVTKDRFRKYAV 244          
BLAST of Ggra6059.t1 vs. uniprot
Match: A0A2V3II63 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II63_9FLOR)

HSP 1 Score: 165 bits (418), Expect = 2.790e-42
Identity = 99/284 (34.86%), Postives = 145/284 (51.06%), Query Frame = 0
Query:   82 TQAVGYSESETGIEPPMKGMSNVVKSLMNTVWEGFKKSYFAAYNCEMKSL-GVTHQTLGVESAIEWGEAQLVLTDPPFNTRRKRVKRNSGHDVLTEEDMIDTAEATDSVLRPGGHFIIFCSMEQFPQWFKILRETPCQQNQNKPAFR--VDPHPMVFIRDAANLNWDPSKK-VGLQPLTKYAIHGVKLGLSNQEQASMTPLEPAGLVPSSFPATKNVLDHVPKPGRGEGLVWRVKEKGSSTFTSQLIRPEQKARIFMGELIARFTKPGDLVADFFSGTFSTGVA 361
            +Q V Y    TGI  P    +N+   +     E      F  +NC+ + L  V H   G       G  Q +L+DPP+ TR +R   NS HD+LTE+ M  +A ++ ++LRPGGH I FCS +Q P W  +LR+     + +   +   +D  P+ F+R   N   +  ++   L   T+YA+H V  G+   +Q  M   E    V S +PA   ++D VP     E L+W VK      +T + +RPEQK R  + ELI  F++PGDLV   F+GTFST +A
Sbjct:   28 SQNVWYDVEGTGIRAPPYP-TNLDDVIGYKYCEKEMSRNFRLHNCKFEHLIEVDHNKSGESEVSIEGRVQFLLSDPPYGTRSERRLENSEHDILTEKGMSRSARSSSTLLRPGGHIIPFCSWDQVPLWRDVLRKVTYMDDSDTMRYSLVIDEQPLHFVRSLGNSTGNVGRRSCRLHQTTEYAVHAVCAGVPYAQQHWMVNCENFHYVASRYPAYHAIMDQVPPISNSEMLMWSVKNLDGK-YTRKRVRPEQKCRALLNELICWFSQPGDLVVGMFAGTFSTPMA 309          
The following BLAST results are available for this feature:
BLAST of Ggra6059.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
uncharacterized protein LOC123544675 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D827F1.020e-6828.36uncharacterized protein LOC123544675 n=1 Tax=Merce... [more]
uncharacterized protein LOC123544288 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4E031.510e-6728.36uncharacterized protein LOC123544288 n=1 Tax=Merce... [more]
A0A2V3IE032.000e-5940.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IWE97.430e-5039.34DNA adenine methyltransferase YhdJ n=1 Tax=Gracila... [more]
A0A2V3II632.790e-4234.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001091Restriction/modification DNA-methylasePRINTSPR00508S21N4MTFRASEcoord: 369..389
score: 22.98
coord: 148..162
score: 31.67
coord: 182..202
score: 22.02
coord: 344..362
score: 43.16
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 140..387
e-value: 1.7E-19
score: 72.3
NoneNo IPR availableGENE3D2.170.270.10SET domaincoord: 453..680
e-value: 2.0E-6
score: 29.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 492..673
IPR002941DNA methylase N-4/N-6PFAMPF01555N6_N4_Mtasecoord: 150..384
e-value: 5.7E-12
score: 45.8
IPR001214SET domainPROSITEPS50280SETcoord: 496..670
score: 10.725673
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 144..389

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:403964..406042 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6059.t1Ggra6059.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 403964..406042 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6059.t1 ID=Ggra6059.t1|Name=Ggra6059.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=693bp
MHRRAENPNHKRDEKLPERFDKLSDTLWEPIQRKRQSVGYEVGVLQGPGE
SSVPQPTRSTDEIVNLVSSDDDDFESPRPSGTQAVGYSESETGIEPPMKG
MSNVVKSLMNTVWEGFKKSYFAAYNCEMKSLGVTHQTLGVESAIEWGEAQ
LVLTDPPFNTRRKRVKRNSGHDVLTEEDMIDTAEATDSVLRPGGHFIIFC
SMEQFPQWFKILRETPCQQNQNKPAFRVDPHPMVFIRDAANLNWDPSKKV
GLQPLTKYAIHGVKLGLSNQEQASMTPLEPAGLVPSSFPATKNVLDHVPK
PGRGEGLVWRVKEKGSSTFTSQLIRPEQKARIFMGELIARFTKPGDLVAD
FFSGTFSTGVACVLLPESRKFLGCEKDEACFTHAKAFATLEFCKMLHDGD
TDIVLDQKVVDAASKVHDRVLSTYKRARAEWTAPPGYPPYQTLPRHILQF
VEAFCGAPGLVEECVDKNMDEWSSSHRGALHFMCPYTLLVVDATRYRLRI
GPSDIKHPKVGRGVFTTGMISEGETFCYFYGTLVYSDLSGRTERHTTYGS
GILGATPRRYKLFSMMVTVGGREFLSLKNRPGEGRDSKESEVYIVPAPFC
IAGYINDAGYHAGDEDLALPRSERKRSPNVIIREARPVIQSKSELMKYTL
LRVTAKRQIEVGEELYVSYCAEYNWDWALTLDHAEEDGWLRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001091RM_Methylase
IPR002941DNA_methylase_N4/N6
IPR001214SET_dom
IPR029063SAM-dependent_MTases