Ggra8513.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8513.t1
Unique NameGgra8513.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length197
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:974579..975169 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8513Ggra8513Gracilaria gracilis GNS1m malegenetig00000041_pilon 974579..975169 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8513.t1.stop1Ggra8513.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000041_pilon 974579..974581 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8513.t1.CDS1Ggra8513.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000041_pilon 974579..975169 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8513.t1.exon1Ggra8513.t1.exon1Gracilaria gracilis GNS1m maleexontig00000041_pilon 974579..975169 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8513.t1.start1Ggra8513.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000041_pilon 975167..975169 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8513.t1Ggra8513.t1Gracilaria gracilis GNS1m malepolypeptidetig00000041_pilon 974579..975169 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8513.t1 ID=Ggra8513.t1|Name=Ggra8513.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=197bp
MAAEHLLMELLTRRISRVYSSQKRVTPSEEVLKDHVDETSICNAEDTEVV
TEIEGTAGTAAGGRTSLSSHVKFQNHARLFRPQGTKKTKAQVDIAQAMKQ
NADNIDGLVQQSAKRNKLFANYVMLQKEKNNHMLFTMEGTDILMRKKYIT
LIQKKLLLELEEGLSSANANDVADPAATVQQPALISAHNESSLSAG*
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spliced messenger RNA

>Ggra8513.t1 ID=Ggra8513.t1|Name=Ggra8513.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=591bp|location=Sequence derived from alignment at tig00000041_pilon:974579..975169- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTGCAGAGCACTTACTTATGGAGCTCCTTACTAGAAGAATATCTCG
TGTTTACAGCTCCCAGAAACGTGTTACCCCTTCTGAAGAGGTTCTCAAAG
ATCATGTTGATGAAACCTCTATATGCAACGCAGAGGACACCGAGGTCGTC
ACAGAAATCGAAGGCACCGCTGGAACTGCTGCTGGTGGTCGAACCTCATT
ATCGAGTCATGTTAAATTCCAGAACCATGCGAGGCTTTTCCGTCCGCAGG
GGACGAAGAAGACGAAGGCCCAGGTGGACATTGCGCAGGCAATGAAGCAG
AATGCGGACAATATTGACGGACTGGTTCAGCAGTCAGCTAAGCGTAACAA
ACTCTTTGCAAATTACGTTATGTTGCAAAAGGAAAAGAATAACCATATGC
TCTTCACTATGGAGGGTACGGACATTTTAATGCGAAAGAAGTACATTACA
CTTATCCAAAAAAAGTTGCTGTTGGAGCTAGAAGAGGGACTAAGTTCTGC
GAACGCGAATGACGTTGCTGATCCTGCAGCAACTGTTCAGCAACCAGCAC
TAATATCTGCCCACAACGAGAGTTCTTTGAGCGCTGGATAA
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protein sequence of Ggra8513.t1

>Ggra8513.t1 ID=Ggra8513.t1|Name=Ggra8513.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=197bp
MAAEHLLMELLTRRISRVYSSQKRVTPSEEVLKDHVDETSICNAEDTEVV
TEIEGTAGTAAGGRTSLSSHVKFQNHARLFRPQGTKKTKAQVDIAQAMKQ
NADNIDGLVQQSAKRNKLFANYVMLQKEKNNHMLFTMEGTDILMRKKYIT
LIQKKLLLELEEGLSSANANDVADPAATVQQPALISAHNESSLSAG*
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mRNA from alignment at tig00000041_pilon:974579..975169-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8513.t1 ID=Ggra8513.t1|Name=Ggra8513.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=591bp|location=Sequence derived from alignment at tig00000041_pilon:974579..975169- (Gracilaria gracilis GNS1m male)
ATGGCTGCAGAGCACTTACTTATGGAGCTCCTTACTAGAAGAATATCTCG
TGTTTACAGCTCCCAGAAACGTGTTACCCCTTCTGAAGAGGTTCTCAAAG
ATCATGTTGATGAAACCTCTATATGCAACGCAGAGGACACCGAGGTCGTC
ACAGAAATCGAAGGCACCGCTGGAACTGCTGCTGGTGGTCGAACCTCATT
ATCGAGTCATGTTAAATTCCAGAACCATGCGAGGCTTTTCCGTCCGCAGG
GGACGAAGAAGACGAAGGCCCAGGTGGACATTGCGCAGGCAATGAAGCAG
AATGCGGACAATATTGACGGACTGGTTCAGCAGTCAGCTAAGCGTAACAA
ACTCTTTGCAAATTACGTTATGTTGCAAAAGGAAAAGAATAACCATATGC
TCTTCACTATGGAGGGTACGGACATTTTAATGCGAAAGAAGTACATTACA
CTTATCCAAAAAAAGTTGCTGTTGGAGCTAGAAGAGGGACTAAGTTCTGC
GAACGCGAATGACGTTGCTGATCCTGCAGCAACTGTTCAGCAACCAGCAC
TAATATCTGCCCACAACGAGAGTTCTTTGAGCGCTGGATAA
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Coding sequence (CDS) from alignment at tig00000041_pilon:974579..975169-

>Ggra8513.t1 ID=Ggra8513.t1|Name=Ggra8513.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=591bp|location=Sequence derived from alignment at tig00000041_pilon:974579..975169- (Gracilaria gracilis GNS1m male)
ATGGCTGCAGAGCACTTACTTATGGAGCTCCTTACTAGAAGAATATCTCG
TGTTTACAGCTCCCAGAAACGTGTTACCCCTTCTGAAGAGGTTCTCAAAG
ATCATGTTGATGAAACCTCTATATGCAACGCAGAGGACACCGAGGTCGTC
ACAGAAATCGAAGGCACCGCTGGAACTGCTGCTGGTGGTCGAACCTCATT
ATCGAGTCATGTTAAATTCCAGAACCATGCGAGGCTTTTCCGTCCGCAGG
GGACGAAGAAGACGAAGGCCCAGGTGGACATTGCGCAGGCAATGAAGCAG
AATGCGGACAATATTGACGGACTGGTTCAGCAGTCAGCTAAGCGTAACAA
ACTCTTTGCAAATTACGTTATGTTGCAAAAGGAAAAGAATAACCATATGC
TCTTCACTATGGAGGGTACGGACATTTTAATGCGAAAGAAGTACATTACA
CTTATCCAAAAAAAGTTGCTGTTGGAGCTAGAAGAGGGACTAAGTTCTGC
GAACGCGAATGACGTTGCTGATCCTGCAGCAACTGTTCAGCAACCAGCAC
TAATATCTGCCCACAACGAGAGTTCTTTGAGCGCTGGATAA
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