Ggra8413.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8413.t1
Unique NameGgra8413.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length92
Homology
BLAST of Ggra8413.t1 vs. uniprot
Match: A0A2V3IFE7 (Ribosomal protein L37 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE7_9FLOR)

HSP 1 Score: 179 bits (453), Expect = 5.950e-57
Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 0
Query:    1 MTKGTSSFGKRTSKTHTLCVRCGRRSYHIQKKQCASCGYPCARKRTYNWSTKSKRRRTTGTGRLRHLRHVPRRFKNGFREGTVAQKITSVA 91
            MTKGTSSFGKRTSK+HTLCVRCGRRSYHIQKKQCASCGYPCA+KRTYNWS KSKRRRTTGTGRLRHLRH+ RRFKNGFREGT AQKITSVA
Sbjct:    1 MTKGTSSFGKRTSKSHTLCVRCGRRSYHIQKKQCASCGYPCAKKRTYNWSVKSKRRRTTGTGRLRHLRHLSRRFKNGFREGTAAQKITSVA 91          
BLAST of Ggra8413.t1 vs. uniprot
Match: R7Q689 (Ribosomal protein L37 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q689_CHOCR)

HSP 1 Score: 166 bits (419), Expect = 9.740e-52
Identity = 80/88 (90.91%), Postives = 82/88 (93.18%), Query Frame = 0
Query:    1 MTKGTSSFGKRTSKTHTLCVRCGRRSYHIQKKQCASCGYPCARKRTYNWSTKSKRRRTTGTGRLRHLRHVPRRFKNGFREGTVAQKIT 88
            MTKGTSS+GKRTSKTHTLCVRCGRRSYHIQKK CASCGYP ARKRTYNWS KSKRRRTTGTGRLRHLR +PRRFKNGFREGTVA K T
Sbjct:    1 MTKGTSSYGKRTSKTHTLCVRCGRRSYHIQKKTCASCGYPSARKRTYNWSNKSKRRRTTGTGRLRHLRDMPRRFKNGFREGTVAVKST 88          
BLAST of Ggra8413.t1 vs. uniprot
Match: A0A1X6P3T5 (Ribosomal protein L37 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3T5_PORUM)

HSP 1 Score: 154 bits (390), Expect = 2.590e-47
Identity = 71/85 (83.53%), Postives = 81/85 (95.29%), Query Frame = 0
Query:    1 MTKGTSSFGKRTSKTHTLCVRCGRRSYHIQKKQCASCGYPCARKRTYNWSTKSKRRRTTGTGRLRHLRHVPRRFKNGFREGTVAQ 85
            MTKGTSSFGKRTSK+HTLCVRCGRRS+HIQK +CASCGYP ARKRTYNWS KSKRRRTTGTGR++HL+++PRR+KNGFREGT A+
Sbjct:    1 MTKGTSSFGKRTSKSHTLCVRCGRRSFHIQKSRCASCGYPAARKRTYNWSEKSKRRRTTGTGRMQHLKNMPRRYKNGFREGTQAK 85          
BLAST of Ggra8413.t1 vs. uniprot
Match: M2WTY6 (Ribosomal protein L37 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WTY6_GALSU)

HSP 1 Score: 145 bits (367), Expect = 9.120e-44
Identity = 66/84 (78.57%), Postives = 76/84 (90.48%), Query Frame = 0
Query:    1 MTKGTSSFGKRTSKTHTLCVRCGRRSYHIQKKQCASCGYPCARKRTYNWSTKSKRRRTTGTGRLRHLRHVPRRFKNGFREGTVA 84
            MTKGTSSFGKR +KTH LC+RCGRR+YH+QKK+CASCGYP A+KR +NWS KS RRRTTGTGR+R+LRH+PRRFKNGFREG  A
Sbjct:    1 MTKGTSSFGKRNNKTHVLCIRCGRRAYHLQKKRCASCGYPSAKKRRFNWSEKSIRRRTTGTGRMRYLRHLPRRFKNGFREGVKA 84          
BLAST of Ggra8413.t1 vs. uniprot
Match: probable 60S ribosomal protein L37-A n=2 Tax=Pectinidae TaxID=6566 RepID=UPI000B45BC68 (probable 60S ribosomal protein L37-A n=2 Tax=Pectinidae TaxID=6566 RepID=UPI000B45BC68)

HSP 1 Score: 144 bits (363), Expect = 4.320e-43
Identity = 69/85 (81.18%), Postives = 76/85 (89.41%), Query Frame = 0
Query:    1 MTKGTSSFGKRTSKTHTLCVRCGRRSYHIQKKQCASCGYPCARKRTYNWSTKSKRRRTTGTGRLRHLRHVPRRFKNGFREGTVAQ 85
            MTKGTSSFGKR +KTHT C RCGRRS+HIQKK CASCGYP  +KRTYNWS KSKRRRTTGTGR+RHL+ V RRF+NGFREGTVA+
Sbjct:    1 MTKGTSSFGKRHNKTHTHCRRCGRRSFHIQKKVCASCGYPSPKKRTYNWSEKSKRRRTTGTGRMRHLKDVFRRFRNGFREGTVAK 85          
BLAST of Ggra8413.t1 vs. uniprot
Match: A0A6P3YUW5 (Ribosomal protein L37 n=20 Tax=Pentapetalae TaxID=1437201 RepID=A0A6P3YUW5_ZIZJJ)

HSP 1 Score: 143 bits (360), Expect = 1.030e-42
Identity = 65/84 (77.38%), Postives = 76/84 (90.48%), Query Frame = 0
Query:    1 MTKGTSSFGKRTSKTHTLCVRCGRRSYHIQKKQCASCGYPCARKRTYNWSTKSKRRRTTGTGRLRHLRHVPRRFKNGFREGTVA 84
            M KGT SFGKR +KTHTLCVRCGRRS+H+QK +CA+CG+P ARKRTYNWS K+ RR+TTGTGR+R+LRHVPRRFK+GFREGT A
Sbjct:    1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACGFPAARKRTYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQA 84          
BLAST of Ggra8413.t1 vs. uniprot
Match: A0A7I8V802 (Ribosomal protein L37 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8V802_9ANNE)

HSP 1 Score: 142 bits (359), Expect = 1.610e-42
Identity = 67/83 (80.72%), Postives = 74/83 (89.16%), Query Frame = 0
Query:    1 MTKGTSSFGKRTSKTHTLCVRCGRRSYHIQKKQCASCGYPCARKRTYNWSTKSKRRRTTGTGRLRHLRHVPRRFKNGFREGTV 83
            MTKGTSSFGKR +KTHT+C RCGR +YHIQKK CASCGYP ARKR++NWS KSKRRRTTGTGR+RHL+ V RRF NGFREGTV
Sbjct:    1 MTKGTSSFGKRHNKTHTICRRCGRSAYHIQKKDCASCGYPQARKRSFNWSEKSKRRRTTGTGRMRHLKKVQRRFNNGFREGTV 83          
BLAST of Ggra8413.t1 vs. uniprot
Match: A0A2I4G0S3 (Ribosomal protein L37 n=11 Tax=rosids TaxID=71275 RepID=A0A2I4G0S3_JUGRE)

HSP 1 Score: 142 bits (358), Expect = 2.090e-42
Identity = 65/84 (77.38%), Postives = 75/84 (89.29%), Query Frame = 0
Query:    1 MTKGTSSFGKRTSKTHTLCVRCGRRSYHIQKKQCASCGYPCARKRTYNWSTKSKRRRTTGTGRLRHLRHVPRRFKNGFREGTVA 84
            M KGT SFGKR +KTHTLCVRCGRRS+H+QK +CA+C YP ARKRTYNWS K+ RR+TTGTGR+R+LRHVPRRFK+GFREGT A
Sbjct:    1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQA 84          
BLAST of Ggra8413.t1 vs. uniprot
Match: A0A397G6U8 (Ribosomal protein L37 n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397G6U8_9GLOM)

HSP 1 Score: 142 bits (358), Expect = 2.090e-42
Identity = 65/86 (75.58%), Postives = 77/86 (89.53%), Query Frame = 0
Query:    1 MTKGTSSFGKRTSKTHTLCVRCGRRSYHIQKKQCASCGYPCARKRTYNWSTKSKRRRTTGTGRLRHLRHVPRRFKNGFREGTVAQK 86
            MTKGTSSFGKR +KTHTLC RCG R++H QKK+CA CGYP A+ R+YNWS K KRR+TTGTGR+R+L+H+PRRFKNGFREGTVA+K
Sbjct:    1 MTKGTSSFGKRHTKTHTLCRRCGSRAFHNQKKKCAQCGYPNAKTRSYNWSEKGKRRKTTGTGRMRYLKHLPRRFKNGFREGTVAKK 86          
BLAST of Ggra8413.t1 vs. uniprot
Match: 60S ribosomal protein L37-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE5FF47 (60S ribosomal protein L37-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE5FF47)

HSP 1 Score: 142 bits (358), Expect = 2.430e-42
Identity = 68/82 (82.93%), Postives = 73/82 (89.02%), Query Frame = 0
Query:    1 MTKGTSSFGKRTSKTHTLCVRCGRRSYHIQKKQCASCGYPCARKRTYNWSTKSKRRRTTGTGRLRHLRHVPRRFKNGFREGT 82
            MTKGTSSFGKR +KTHT C RCGRR YHIQKK CASCGYP ARKRT+NWS KSKRRRTTGTGR+RHL+ V RRF+NGFREGT
Sbjct:    1 MTKGTSSFGKRHNKTHTHCRRCGRRGYHIQKKTCASCGYPAARKRTFNWSIKSKRRRTTGTGRMRHLKIVFRRFRNGFREGT 82          
The following BLAST results are available for this feature:
BLAST of Ggra8413.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFE75.950e-5793.41Ribosomal protein L37 n=1 Tax=Gracilariopsis chord... [more]
R7Q6899.740e-5290.91Ribosomal protein L37 n=1 Tax=Chondrus crispus Tax... [more]
A0A1X6P3T52.590e-4783.53Ribosomal protein L37 n=1 Tax=Porphyra umbilicalis... [more]
M2WTY69.120e-4478.57Ribosomal protein L37 n=1 Tax=Galdieria sulphurari... [more]
probable 60S ribosomal protein L37-A n=2 Tax=Pectinidae TaxID=6566 RepID=UPI000B45BC684.320e-4381.18probable 60S ribosomal protein L37-A n=2 Tax=Pecti... [more]
A0A6P3YUW51.030e-4277.38Ribosomal protein L37 n=20 Tax=Pentapetalae TaxID=... [more]
A0A7I8V8021.610e-4280.72Ribosomal protein L37 n=1 Tax=Dimorphilus gyrocili... [more]
A0A2I4G0S32.090e-4277.38Ribosomal protein L37 n=11 Tax=rosids TaxID=71275 ... [more]
A0A397G6U82.090e-4275.58Ribosomal protein L37 n=1 Tax=Diversispora epigaea... [more]
60S ribosomal protein L37-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE5FF472.430e-4282.9360S ribosomal protein L37-like n=2 Tax=Haliotis Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011331Ribosomal protein L37ae/L37eGENE3D2.20.25.30coord: 1..88
e-value: 1.3E-44
score: 152.3
IPR001569Ribosomal protein L37ePFAMPF01907Ribosomal_L37ecoord: 2..54
e-value: 1.6E-25
score: 89.0
IPR001569Ribosomal protein L37eHAMAPMF_00547Ribosomal_L37ecoord: 2..53
score: 16.385811
NoneNo IPR availablePANTHERPTHR1076860S RIBOSOMAL PROTEIN L37coord: 1..87
IPR018267Ribosomal protein L37e, conserved sitePROSITEPS01077RIBOSOMAL_L37Ecoord: 4..23
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:504040..504439 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8413.t1Ggra8413.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 504040..504439 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8413.t1 ID=Ggra8413.t1|Name=Ggra8413.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=92bp
MTKGTSSFGKRTSKTHTLCVRCGRRSYHIQKKQCASCGYPCARKRTYNWS
TKSKRRRTTGTGRLRHLRHVPRRFKNGFREGTVAQKITSVA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011331Ribosomal_L37ae/L37e
IPR001569Ribosomal_L37e
IPR018267Ribosomal_L37e_CS
IPR011332Ribosomal_zn-bd