Ggra8406.t1 (polypeptide) Gracilaria gracilis GNS1m male
|
Overview
Homology
BLAST of Ggra8406.t1 vs. uniprot
Match: A0A2V3IKM2 (DNA topoisomerase 6 subunit B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKM2_9FLOR) HSP 1 Score: 956 bits (2471), Expect = 0.000e+0 Identity = 499/672 (74.26%), Postives = 550/672 (81.85%), Query Frame = 0
Query: 470 LKFKSPAEFFAENKNIAGFDNAGKSLYTTIRELVENALDAAEAVHQLPRVSLLVQRIPPHRFRALVGMDAARERVDHSLYKDVENVKERRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKPSRQLPNDVFRVTVQDNGCGMAHHDVPNMMGRVLAGTKYCVRQARGKFGLGSKMALIWAKMSTGLPVHITT-AQRGAPITECVLDIDITNNVPTVIKHTQTPNPKKWRGTIVAVTIDGNWSTYRSKILAYMRQMAVITPYAQFHFKFQSALHATGAKDFEAIFSRRTDHMPPSSREVKHHPSSVNQLILKQLIEQISPSTTLVRFLSSQFDAIPRTLAVRLINELGGDFTSHMTVKQLNLNHIRQIDALLHAVRFEKPSGSCLSPAGEYNLRLGITKELKPNLVATHAEPPDVFEGHPFIVEAGVALGGSGMKPGINIYRFANRIPLLFEAGNDVVTKTARDSIRWNNYKMSPTTDRIAVICSIVSTKIPFKGTGKEYIGDDSDAIKACVKRAISQCCLQLKTKLVRRAAQKDAAERKKTITKYAPDVANAIVGVFKELRDPEQSTREVVDKVQSGQITKDSLINKLIEHVQQIDKEQAIECASAAGRHNKQIETAFLARRSEQNAYLNIWH-----GTLNAKSVAAPSPPIRLSLLKSLQ 1135
LKFKSPAEFFAENKNIAGFDN GKSLYTTIRELVENALDAAE++H LP VSL +QRIPPHRFR+++GMDAA RVDHSLYK ++ ++P R N VFRVTVQDNGCGMAH DVPNMM RVLAGTKYCVRQARGKFGLGSKMALIWAKMSTGLP+ +TT A APIT CVLDIDITNN PTVI HT++PNPK WRG+ V+VTI GNW+TYRSKILAYMRQMAVITPYAQFH FQS + A +KD EAIFSRRTDHMPP +REVKHHPSSVNQLILKQL+ + PSTTLV FLS+Q D+IPR+LAVRLINELG DFTSHMTV QL LNHIRQIDALLHA RF+KP+GSCLSPAGEYNLRLGITKELKP LVATHAEP DVFEGHPFIVEAGVALGGSGMKPGIN+YRFANRIPLLFEAGNDVVTKTARDSIRWNNYK+SPTTDRI VICSIVSTKIPFKGTGKEYIGDDSD IKA VKRAI+QCCLQLKTKLVRRAAQKDAAERKKTITKYAP VA A+V +F ++ + + STR+VVDKVQSG+ITK++L+NKL+EHVQQIDKEQAIE ASA GR +K+ E +LA R+ Q AYLN+W G + K A+ S +RLSLLK+LQ
Sbjct: 42 LKFKSPAEFFAENKNIAGFDNPGKSLYTTIRELVENALDAAESIHNLPDVSLHIQRIPPHRFRSMLGMDAAPHRVDHSLYKRPPIPEQTTTKNSNLNNNINNPDSH-----------------------SRP-RHTANHVFRVTVQDNGCGMAHDDVPNMMARVLAGTKYCVRQARGKFGLGSKMALIWAKMSTGLPLCVTTSASPSAPITHCVLDIDITNNRPTVISHTKSPNPKTWRGSKVSVTIQGNWTTYRSKILAYMRQMAVITPYAQFHLIFQSNVDAADSKDLEAIFSRRTDHMPPPAREVKHHPSSVNQLILKQLLGLVKPSTTLVHFLSTQLDSIPRSLAVRLINELGPDFTSHMTVSQLQLNHIRQIDALLHAARFDKPNGSCLSPAGEYNLRLGITKELKPTLVATHAEPADVFEGHPFIVEAGVALGGSGMKPGINVYRFANRIPLLFEAGNDVVTKTARDSIRWNNYKISPTTDRIGVICSIVSTKIPFKGTGKEYIGDDSDVIKASVKRAITQCCLQLKTKLVRRAAQKDAAERKKTITKYAPGVAKALVDLFSQVDNADASTRDVVDKVQSGEITKETLLNKLLEHVQQIDKEQAIEYASATGRDHKKTEMVYLAPRAGQEAYLNLWQQRSTKGKHDDK--ASVSSTVRLSLLKALQ 687
BLAST of Ggra8406.t1 vs. uniprot
Match: R7QF50 (Type II DNA topoisomerase VI subunit B n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF50_CHOCR) HSP 1 Score: 864 bits (2232), Expect = 1.390e-300 Identity = 457/688 (66.42%), Postives = 525/688 (76.31%), Query Frame = 0
Query: 470 LKFKSPAEFFAENKNIAGFDNAGKSLYTTIRELVENALDAAEAVHQLPRVSLLVQRIPPHRFRALVGMDAARERVDHSLYKDVENVKERRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------TTKPSRQLPNDVFRVTVQDNGCGMAHHDVPNMMGRVLAGTKYCVRQARGKFGLGSKMALIWAKMSTGLPVHITTAQRGAPITECVLDIDITNNVPTVIKHTQTPNPKKWRGTIVAVTIDGNWSTYRSKILAYMRQMAVITPYAQFHFKFQSALHATGAKDFEAIFSRRTDHMPPSSREVKHHPSSVNQLILKQLIEQISPSTTLVRFLSSQFDAIPRTLAVRLINELGGDFTSHMTVKQLNLNHIRQIDALLHAVRFEKPSGSCLSPAGEYNLRLGITKELKPNLVATHAEPPDVFEGHPFIVEAGVALGGSGMKPGINIYRFANRIPLLFEAGNDVVTKTARDSIRWNNYKMSPTTDRIAVICSIVSTKIPFKGTGKEYIGDDSDAIKACVKRAISQCCLQLKTKLVRRAAQKDAAERKKTITKYAPDVANAIVGVFKELRDPEQSTREVVDKVQSGQITKDSLINKLIEHVQQIDKEQAIECASAAGRHNKQIETAFLARRSEQNAYLNIWHGTLNAKSVAAPS-----PPIRLSLLKSLQ 1135
LKFKSPAEFFAENKNIAGFDN GKSLYTTIRELVEN LDAAEA+ LP + + V RI +FR +VGMD R RVD SLYKDVE+VKER+A XXXXXXXX ++K + ND+F VTV DNG GMAH DVPNMMGRVLAGTKYCVRQ RGKFGLGSKMALIW+KMSTGLPV I TA+ G+ +T C+LDIDI N+P VI+ ++ NP WRG+ V+VTI+GNWSTYR+KIL Y+RQMAVITPYAQF F S +KDFE +FSRRTD MP ++ EVKHHPSSVNQL+LKQLI + +LVRFL++QF AIPR+LA RLI ELG FT HMTV +L LN+IRQIDALLHA RFE P G CLSPAGEYNLRLGITKELKP++VATHAEP DVFEGHPFIVEAGVALGG+GMKPG+NI+RFANRIPLLFEAGNDVVT+TARD IRWN+YK+SP TDRI VICSIVSTK+PFKGTGKEYIGDDSD+IK CVKRAI+QCCLQLKTKLVR+AAQKDAA+RK ITKYAPDVANA+V +F+EL DP++ T++V D V +G+I++D L+ KL +HVQQ DKEQAIE A+A GR +K +ET F+ARRSEQ Y IW A S S P +R SLL SLQ
Sbjct: 52 LKFKSPAEFFAENKNIAGFDNPGKSLYTTIRELVENGLDAAEAIGTLPDIEIFVARIDKQQFRTMVGMDGNRNRVDASLYKDVESVKERKAREXXXXXXXXRTKSKDGSLSASGSGQLQTDNDDANDSKELTLESTQEASQPSQTSSKKGKSGGNDIFCVTVTDNGSGMAHDDVPNMMGRVLAGTKYCVRQTRGKFGLGSKMALIWSKMSTGLPVRINTAKAGSEVTNCILDIDIARNIPNVIELSRKENPSGWRGSKVSVTIEGNWSTYRAKILLYVRQMAVITPYAQFRLTFSSGYDNADSKDFELVFSRRTDKMPRTAAEVKHHPSSVNQLLLKQLIGDVKEDMSLVRFLTTQFVAIPRSLATRLITELGKGFTQHMTVGELTLNNIRQIDALLHAARFENPDGLCLSPAGEYNLRLGITKELKPSMVATHAEPADVFEGHPFIVEAGVALGGTGMKPGLNIFRFANRIPLLFEAGNDVVTRTARDGIRWNSYKISPNTDRIGVICSIVSTKVPFKGTGKEYIGDDSDSIKLCVKRAITQCCLQLKTKLVRQAAQKDAAQRKMLITKYAPDVANAVVALFEELEDPDRETKDVSDSVLNGKISRDILLAKLQDHVQQFDKEQAIEYATAHGRDHKTLETVFIARRSEQINYSPIWLEQPRATSTPEGSQQESAPVVRFSLLSSLQ 739
BLAST of Ggra8406.t1 vs. uniprot
Match: A0A1Y1I7R1 (DNA topoisomerase 6 subunit B n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I7R1_KLENI) HSP 1 Score: 614 bits (1584), Expect = 3.250e-204 Identity = 339/658 (51.52%), Postives = 447/658 (67.93%), Query Frame = 0
Query: 464 GAEQQHLKFKSPAEFFAENKNIAGFDNAGKSLYTTIRELVENALDAAEAVHQLPRVSLLVQRIPPHRFRALVGMDAARERVDHSLYKDVEN--VKERRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKPSRQLPNDVFRVTVQDNGCGMAHHDVPNMMGRVLAGTKYCVRQARGKFGLGSKMALIWAKMSTGLPVHITTAQRGAPI-TECVLDIDITNNVPTVIKHTQTPNPKKWRGTIVAVTIDGNWSTYRSKILAYMRQMAVITPYAQFHFKFQSALHATGAKDFEAIFSRRTDHMPPSSREVKHHPSSVNQLILKQLIEQISPSTTLVRFLSSQFDAIPRTLAVRLINELGGDFTSHMTVKQLNLNHIRQIDALLHAVRFEKPSGSCLSPAGEYNLRLGITKELKPNLVATHAEPPDVFEGHPFIVEAGVALGGSGMKPGINIYRFANRIPLLFEAGNDVVTKTARDSIRWNNYKMSPTTDRIAVICSIVSTKIPFKGTGKEYIGDDSDAIKACVKRAISQCCLQLKTKLVRRAAQKDAAERKKTITKYAPDVANAIVGVFKELRDPEQSTREV-------VDKVQSGQITKDSLINKLIEHVQQIDKEQAIECASAAGRHNKQIETAFLARRSEQNAYLNIWH 1111
G + LK KSPAEFF+ENKNIAGFDN GKSLYTT+RELVENALD+AE++ +LP + + ++ I RF AL+G+ ++RVD LY D E +KE+R XXXXXXXXXXXXX +RVTV+DNG GM H D+PNM+GRVL+GTKY +RQ RGKFGLG+KMALIW+KMSTGLP+ I +A +G P T C LDIDI N+P + KH + PNP++WRG + V I+GNW+TY+SKI+ YMRQMAVITPYA+F F+F S T K+ F+RRTD MP + +E K+HPS+V+ L++K+LI + S T L +FL ++FD + + LA RLI E+G DF S M V+ L + +I L +F PSG CLSPAGEYN+RLGI K+L P++VAT+ VFEGHPFIVEAG++LGG +KPGIN++RFANRIPLLFEAG DV+T+TA I W +YK++ TTD+I V SIVSTKIPFKGTGKEYIGDD I A VK+A+ QCCLQLK+K+VR+ ++ +RK+ + +Y PDV A+ V + D ++ E+ ++KV S ++T+++L KL +HV+Q+D E A+E A+ G+ ET FL + A+L H
Sbjct: 24 GKKHPVLKQKSPAEFFSENKNIAGFDNPGKSLYTTVRELVENALDSAESIAELPEIEVTIEEIEKSRFHALIGL-VDQDRVDEELYGDFETDKLKEKRLAREAKEQERLAXXXXXXXXXXXXXGKGKGDA----------------SFYRVTVKDNGKGMPHDDIPNMLGRVLSGTKYGLRQTRGKFGLGAKMALIWSKMSTGLPIDIRSAMKGHPFCTFCRLDIDIHKNLPNIHKHEKEPNPQRWRGAELQVVIEGNWTTYKSKIVNYMRQMAVITPYAEFVFRFIST---TPDKNISIHFARRTDVMPAAPQEAKYHPSAVDLLLIKRLIAETSKQT-LSQFLVAEFDTVKKPLAERLIGEMGPDFASKMAVRSLTDQQVARIHQLFRQAKFADPSGDCLSPAGEYNMRLGIMKDLHPDMVATYQGSTQVFEGHPFIVEAGLSLGGKDVKPGINVFRFANRIPLLFEAGGDVITRTASKRINWASYKINQTTDKIGVFVSIVSTKIPFKGTGKEYIGDDIPEIAAAVKQALQQCCLQLKSKIVRQQQARERQQRKRNLARYIPDVTRAVFEVLDTIADSKRRRTELPPGDAALLEKVVSEEVTEETLRQKLTQHVEQVDNEMALEYAAQTGKVETAPETIFLRALDSKRAFLPDLH 660
BLAST of Ggra8406.t1 vs. uniprot
Match: DNA topoisomerase 6 subunit B isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C3E1E (DNA topoisomerase 6 subunit B isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C3E1E) HSP 1 Score: 602 bits (1552), Expect = 1.830e-199 Identity = 325/654 (49.69%), Postives = 429/654 (65.60%), Query Frame = 0
Query: 465 AEQQHLKFKSPAEFFAENKNIAGFDNAGKSLYTTIRELVENALDAAEAVHQLPRVSLLVQRIPPHRFRALVGMDAARERVDHSLYKDVENVKERRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKPSRQLPNDVFRVTVQDNGCGMAHHDVPNMMGRVLAGTKYCVRQARGKFGLGSKMALIWAKMSTGLPVHITTAQRGAP-ITECVLDIDITNNVPTVIKHTQTPNPKKWRGTIVAVTIDGNWSTYRSKILAYMRQMAVITPYAQFHFKFQSALHATGAKDFEAIFSRRTDHMPPSSREVKHHPSSVNQLILKQLIEQISPSTTLVRFLSSQFDAIPRTLAVRLINELGGDFTSHMTVKQLNLNHIRQIDALLHAVRFEKPSGSCLSPAGEYNLRLGITKELKPNLVATHAEPPDVFEGHPFIVEAGVALGGSGMKPGINIYRFANRIPLLFEAGNDVVTKTARDSIRWNNYKMSPTTDRIAVICSIVSTKIPFKGTGKEYIGDDSDAIKACVKRAISQCCLQLKTKLVRRAAQKDAAERKKTITKYAPDVANAIVGVFKELRDPEQSTRE---------VVDKVQSGQITKDSLINKLIEHVQQIDKEQAIECASAAGRHNKQIETAFLARRSEQNAYLN 1108
++ +LK KSPAEFFAENKNIAGFDN GKSLYTT+RELVENALD+AE++ QLP V + ++ I +F +++G+ RERVD LY D E VK R + ++VT +DNG GM H D+PNM GRVL+GTKY ++Q RGKFGLG+KMALIW+KMSTGLP+ I+++ +G +T C LDIDI N+P V H + N ++W G + V I+GNW+TYRSKIL YMRQMAVITPYAQF F+F S T K+ F+RRTD MPP E KHHPSSV+ L++K+LI S T L++FL ++F I ++LA RLI E+G DF+ +M VK L + +I L +F+ PSG CLSPAGEYNLRLG+ KEL P++VAT++ VFEGHPFIVEAGV+LGG +K GINI+RFANRIPLLFE G DVVT+TA I W+ YK++ T D+I V SIVSTKIPFKGTGKEYIGDD I VK AI QCC QLK+K+V+R ++ ERK+ +++Y PDV+ A+ V KE+ E +T++ V++KV ITK++L KL +HV+Q+D E A+E A+ +G + E ++ + +N +++
Sbjct: 21 SKDSNLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENALDSAESISQLPEVEITIEEIGKSKFNSMIGL-VDRERVDEKLYDDYETVKAREKRLAKEARAQEIQAKNAASGKKVKEPAVSKVLKGRGEAS----------YYKVTCKDNGKGMPHDDIPNMFGRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMKGQSYVTFCRLDIDIHRNIPHVHLHEKKGNTERWHGAEIQVVIEGNWTTYRSKILHYMRQMAVITPYAQFLFRFISD---TPEKNITIKFARRTDVMPPVPVETKHHPSSVDLLLIKRLIADTSKKT-LLQFLQNEFVNINKSLAARLIGEMGPDFSPNMAVKSLTSQQMVRIHQLFRQAKFDDPSGDCLSPAGEYNLRLGVIKELHPDMVATYSGSAQVFEGHPFIVEAGVSLGGKDVKQGINIFRFANRIPLLFEQGGDVVTRTALKRINWSTYKINQTQDKIGVFISIVSTKIPFKGTGKEYIGDDISEIATAVKSAIQQCCNQLKSKIVKRIQAREQQERKRNLSRYIPDVSGAVYDVLKEM-SREHATKKKRYSGEDALVLEKVSERLITKETLQEKLAKHVEQVDYEMALEYATQSGVSEEPREDIYIQQLDPKNHFVD 658
BLAST of Ggra8406.t1 vs. uniprot
Match: A0A199UVR2 (DNA topoisomerase 6 subunit B n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199UVR2_ANACO) HSP 1 Score: 600 bits (1547), Expect = 1.340e-198 Identity = 324/654 (49.54%), Postives = 427/654 (65.29%), Query Frame = 0
Query: 465 AEQQHLKFKSPAEFFAENKNIAGFDNAGKSLYTTIRELVENALDAAEAVHQLPRVSLLVQRIPPHRFRALVGMDAARERVDHSLYKDVENVKERRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKPSRQLPNDVF-RVTVQDNGCGMAHHDVPNMMGRVLAGTKYCVRQARGKFGLGSKMALIWAKMSTGLPVHITTAQRGAP-ITECVLDIDITNNVPTVIKHTQTPNPKKWRGTIVAVTIDGNWSTYRSKILAYMRQMAVITPYAQFHFKFQSALHATGAKDFEAIFSRRTDHMPPSSREVKHHPSSVNQLILKQLIEQISPSTTLVRFLSSQFDAIPRTLAVRLINELGGDFTSHMTVKQLNLNHIRQIDALLHAVRFEKPSGSCLSPAGEYNLRLGITKELKPNLVATHAEPPDVFEGHPFIVEAGVALGGSGMKPGINIYRFANRIPLLFEAGNDVVTKTARDSIRWNNYKMSPTTDRIAVICSIVSTKIPFKGTGKEYIGDDSDAIKACVKRAISQCCLQLKTKLVRRAAQKDAAERKKTITKYAPDVANAIVGVFKELRDPEQSTR--------EVVDKVQSGQITKDSLINKLIEHVQQIDKEQAIECASAAGRHNKQIETAFLARRSEQNAYLN 1108
A++ LK KSPAEFFAENKNIAGFDN GKSLYTT+RELVEN+LD+AE++ +LP + + ++ I +F ++G+ RERVD LY D E+ K R T K ++ F RVT +DNG GM H D+PNM GRVL+GTKY ++Q RGKFGLG+KMALIW+KMSTGLP+ IT++ +G ++ C LDIDI N+P V H + N +W G + V I+GNW+T+RSKIL YMRQMAVITPYAQF FKF S T K F+RRTD MPP E KHHPS+V+ L++K+L+ + S L++FL +F I ++ A RLI E+G DF+S M VK L I +I L +F+ PSG CLSPAGEYNLRLGI KEL+P+LVAT+A P VFEGHPFIVEAG++LGG +K G+NI+RFANRIPLLFE G DV+T+TA I WN+YK++ D+I V SIVSTKIPFKGTGKEYIGDD I + VK AI QCCLQLK+K+V+R ++ ERK+ + +Y PD + A++ V +++ +S R E++DKV S +IT+ +L L +HV+Q+D E A+E A+ +G + E +L + Y++
Sbjct: 29 AKESVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPVIEIAIEEINKSKFNTMIGL-VDRERVDEELYDDFESAKAREKRLAKEARVQEIQAKNIALGKKFKEPS-----------TAKGAKSRGEAAFFRVTCKDNGRGMPHDDIPNMFGRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEITSSMKGQNYVSYCRLDIDIHKNIPHVHAHEKRENKDRWHGAEIQVIIEGNWTTHRSKILHYMRQMAVITPYAQFLFKFISD---TAEKTVTVRFARRTDVMPPVPLETKHHPSAVDLLLIKRLVAETSKQN-LLQFLQHEFVNIRKSYAERLIGEMGPDFSSKMPVKSLTSQQIVRIQQLFRQAKFDDPSGDCLSPAGEYNLRLGIIKELQPDLVATYAGSPQVFEGHPFIVEAGISLGGKDVKQGLNIFRFANRIPLLFEQGADVITRTALKRINWNSYKINQMQDKIGVFVSIVSTKIPFKGTGKEYIGDDITEISSAVKSAIQQCCLQLKSKIVKRLQARERQERKRNLNRYIPDASRAVMEVLEQMAHNRESKRQRYDKEDEELLDKVASEEITEKTLKECLTQHVEQVDYEMALEYATQSGVSEEPREAIYLNSLEGSHNYID 666
BLAST of Ggra8406.t1 vs. uniprot
Match: A0A0K9P2W3 (DNA topoisomerase 6 subunit B n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P2W3_ZOSMR) HSP 1 Score: 598 bits (1541), Expect = 1.050e-197 Identity = 325/666 (48.80%), Postives = 435/666 (65.32%), Query Frame = 0
Query: 463 SGAEQQHLKFKSPAEFFAENKNIAGFDNAGKSLYTTIRELVENALDAAEAVHQLPRVSLLVQRIPPHRFRALVGMDAARERVDHSLYKDVENVKERRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKPSRQLPN-------DVFRVTVQDNGCGMAHHDVPNMMGRVLAGTKYCVRQARGKFGLGSKMALIWAKMSTGLPVHITTAQRGAP-ITECVLDIDITNNVPTVIKHTQTPNPKKWRGTIVAVTIDGNWSTYRSKILAYMRQMAVITPYAQFHFKFQSALHATGAKDFEAIFSRRTDHMPPSSREVKHHPSSVNQLILKQLIEQISPSTTLVRFLSSQFDAIPRTLAVRLINELGGDFTSHMTVKQLNLNHIRQIDALLHAVRFEKPSGSCLSPAGEYNLRLGITKELKPNLVATHAEPPDVFEGHPFIVEAGVALGGSGMKPGINIYRFANRIPLLFEAGNDVVTKTARDSIRWNNYKMSPTTDRIAVICSIVSTKIPFKGTGKEYIGDDSDAIKACVKRAISQCCLQLKTKLVRRAAQKDAAERKKTITKYAPDVANAIVGVFKELRDPEQSTR-------EVVDKVQSGQITKDSLINKLIEHVQQIDKEQAIECASAAGRHNKQIETAFLARRSEQNAYLNIWHGT 1113
S ++ LK KSPAEFFAENKNIAGFDN GKSLYTT+RELVENALD+AE++ +LP + + ++ I +F ++G+ RERVD LY D E+VK R TK +QL FRVT +DNG GM H+D+PNM+GRVL+GTKY ++Q RGKFGLG+KMALIW+KMSTGLP+ I+++ ++ C LDIDI N+P + H + N + W G + V I+GNW+TYRSKIL YMRQMAVITPYAQF F F S + K+ FSRRTD MPP E K+HPS+V+ L++K+LI + + L++FL +F I ++ A RLI E+G DF+S MTVK L+ + +I L +F+ P+G CLSPAGEYNLRLGITKEL P++VAT++ P VFEGHPFIVEAG++LGG +K G+NI+RFANRIPLLFE G DVVT+TA+ I WN+YK++ T D+I V SIVSTKIPFKGTGKEYIGDD I + VK AI QCCLQLK+K+V++ ++ ERK+ +T+Y PD + AI + KE + R E+++KV + +IT+ + +KLI+H +Q+D E A++ A+ G + E ++ E +L+ +HGT
Sbjct: 28 SKVKESVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENALDSAESISELPVIEVTIEEITKSKFNTMIGL-VDRERVDEELYDDFESVKVREKRLLKEARVQEMNTKNAASGKK-----------------TKEPQQLKTIKGRGDTSFFRVTCKDNGRGMPHNDIPNMLGRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMIDQNYVSFCKLDIDIHRNIPHIHLHEKRDNTEDWHGAEIQVIIEGNWTTYRSKILHYMRQMAVITPYAQFVFSFISDMQD---KNVTVQFSRRTDVMPPIPPETKYHPSAVDLLLIKRLIAETTKQN-LLQFLQHEFVNIGKSYAQRLIEEMGADFSSKMTVKSLSSQQLVRIHQLFRQAKFDDPNGVCLSPAGEYNLRLGITKELHPDMVATYSGSPQVFEGHPFIVEAGISLGGKDVKQGLNIFRFANRIPLLFERGADVVTRTAQKRINWNSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEISSAVKVAIKQCCLQLKSKIVKKIQARERQERKRNLTRYVPDASRAIHDMLKETDLDAKRKRPLPDDYIEILNKVSTNEITEATFRDKLIQHAEQVDYEMALDYATQTGIIEEPREDIYIKPYEENRKFLD-FHGT 670
BLAST of Ggra8406.t1 vs. uniprot
Match: DNA topoisomerase 6 subunit B n=2 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CFB766A (DNA topoisomerase 6 subunit B n=2 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CFB766A) HSP 1 Score: 597 bits (1540), Expect = 1.170e-197 Identity = 324/655 (49.47%), Postives = 427/655 (65.19%), Query Frame = 0
Query: 466 EQQHLKFKSPAEFFAENKNIAGFDNAGKSLYTTIRELVENALDAAEAVHQLPRVSLLVQRIPPHRFRALVGMDAARERVDHSLYKDVENVKERRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKPSR-QLPNDVFRVTVQDNGCGMAHHDVPNMMGRVLAGTKYCVRQARGKFGLGSKMALIWAKMSTGLPVHITTAQRGAP-ITECVLDIDITNNVPTVIKHTQTPNPKKWRGTIVAVTIDGNWSTYRSKILAYMRQMAVITPYAQFHFKFQSALHATGAKDFEAIFSRRTDHMPPSSREVKHHPSSVNQLILKQLIEQISPSTTLVRFLSSQFDAIPRTLAVRLINELGGDFTSHMTVKQLNLNHIRQIDALLHAVRFEKPSGSCLSPAGEYNLRLGITKELKPNLVATHAEPPDVFEGHPFIVEAGVALGGSGMKPGINIYRFANRIPLLFEAGNDVVTKTARDSIRWNNYKMSPTTDRIAVICSIVSTKIPFKGTGKEYIGDDSDAIKACVKRAISQCCLQLKTKLVRRAAQKDAAERKKTITKYAPDVANAIVGVFKEL---------RDPEQSTREVVDKVQSGQITKDSLINKLIEHVQQIDKEQAIECASAAGRHNKQIETAFLARRSEQNAYLNI 1109
E L+ KSPAEFFA+NKNIAGFDN GKSLYTT+RELVEN+LD+AE++ +LP + + ++ I ++ A++G+ + ERVD +LY+D E K R +TK + + +FRVT +DNG GM H D+PNM GRVL+GTKY ++Q RGKFGLG+KMALIW+KMSTGLP+ I+++ +G ++ C LDIDI N+P + KH + N +W G V + I+GNW+TYRSKIL YMRQMAVITPYA+F FK+ + ++ FSRRTD MPP E KHHPSSV+ L++K+LI + S L++FL +F I ++LA RLI E+G F+ M VK L I +I+ L +F+ PSG CLSPAGEYNLRLGI KEL P+LVAT++ VFEGHPFIVEAGV+LGG +K G+NI+RFANRIPLLFE G DVVT+TA I W NYK++ T D+I V SIVSTKIPFKGTGKEYIGDD I A VK AI QCC QLK+K+VR+ ++ ERK+ ++KY PD A AI V KE+ R EQ T +++ KV S +TK++L L +HV+++D E A+E A+ +G + ET +L Y ++
Sbjct: 20 EYSALQQKSPAEFFADNKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPVIEVTIEEIGKAQYYAMIGL-SNHERVDEALYEDYETAKSREKRLRKEFLKKERDAMNAAFGKKVQETA-----------STKAMKGRGETSIFRVTCKDNGRGMPHDDIPNMFGRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIVISSSMKGQDFVSYCKLDIDIRRNIPNIHKHEKRDNKYRWHGAEVQLIIEGNWTTYRSKILHYMRQMAVITPYAEFLFKYVPDQDVSDKQNITIRFSRRTDAMPPVPVETKHHPSSVDLLLIKRLIAETSKQN-LLQFLQHEFVNIGKSLAERLIGEMGPGFSPKMAVKSLTSEQIVRINQLFRQAKFDDPSGDCLSPAGEYNLRLGIIKELNPDLVATYSGSAQVFEGHPFIVEAGVSLGGKDVKQGLNIFRFANRIPLLFEQGGDVVTRTALKRINWTNYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIAAAVKTAIQQCCNQLKSKIVRKIQAREQQERKRNLSKYIPDAAGAIYNVLKEMSQFQASKKQRYEEQDT-DLLKKVYSRTVTKETLTQMLAQHVEKVDYEMAMEYATQSGVTEEPRETIYLPALETDGNYTDL 660
BLAST of Ggra8406.t1 vs. uniprot
Match: LOW QUALITY PROTEIN: DNA topoisomerase 6 subunit B n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929AE2F (LOW QUALITY PROTEIN: DNA topoisomerase 6 subunit B n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929AE2F) HSP 1 Score: 597 bits (1540), Expect = 1.380e-197 Identity = 322/675 (47.70%), Postives = 433/675 (64.15%), Query Frame = 0
Query: 465 AEQQHLKFKSPAEFFAENKNIAGFDNAGKSLYTTIRELVENALDAAEAVHQLPRVSLLVQRIPPHRFRALVGMDAARERVDHSLYKDVENVKERRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKPSRQLPNDVFRVTVQDNGCGMAHHDVPNMMGRVLAGTKYCVRQARGKFGLGSKMALIWAKMSTGLPVHITTAQRGAPITE-CVLDIDITNNVPTVIKHTQTPNPKKWRGTIVAVTIDGNWSTYRSKILAYMRQMAVITPYAQFHFKFQSALHATGAKDFEAIFSRRTDHMPPSSREVKHHPSSVNQLILKQLIEQISPSTTLVRFLSSQFDAIPRTLAVRLINELGGDFTSHMTVKQLNLNHIRQIDALLHAVRFEKPSGSCLSPAGEYNLRLGITKELKPNLVATHAEPPDVFEGHPFIVEAGVALGGSGMKPGINIYRFANRIPLLFEAGNDVVTKTARDSIRWNNYKMSPTTDRIAVICSIVSTKIPFKGTGKEYIGDDSDAIKACVKRAISQCCLQLKTKLVRRAAQKDAAERKKTITKYAPDVANAIVGVFKELRDPEQSTR--------EVVDKVQSGQITKDSLINKLIEHVQQIDKEQAIECASAAGRHNKQIETAFLARRSEQNAYLNIWHGTLNAKSVAAPSPPIRLSL 1130
A++ LK KSPAEFFAENKNIAGFDN GKSLYTT+RELVEN+LD+AE++ +LP + + ++ I +F ++G+ RERVD LY D E+ K R + +RVT +DNG GM H ++PNM GRVL+GTKY ++Q RGKFGLG+KMALIW+KMSTGLP+ I ++ RG C LDIDI N+P V H + N KW G + V I+GNW+TYRSKIL YMRQMAVITPYAQF FKF S + G K+ +F+RRTD MP E KHHPS+V+ L++K+LI + S L++FL +F I +T A RLI E+G DF+ M+VK L I +I L +F+ PSG CLSPAGEYNLRLGI KEL+P++VAT+A P +FEGHPFIVEAG++LGG +K G+N++RFANRIPLLFE G DVVT+TA I W++YK++ D+I V SIVSTKIPFKGTGKEYIGDD I VK AI QCC+QLK+K+V++ ++ ERK+ +T+Y PD +NAI + +++ +++ R E+++KV S +IT+ SL ++L +HV+Q+D E A+E A+ +G ++ ++ Y+N G+ N +P RL +
Sbjct: 27 AKESSLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPVIEITIEEISKSKFNMMIGL-IDRERVDEELYDDFESAKAREKRLAKEARIQETQAKKAALGKKMKEPASVKGVKGRGEAS----------FYRVTCKDNGRGMPHDEIPNMFGRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEIASSMRGQNFKSFCKLDIDIHKNIPHVHLHEKRENKDKWHGAEIQVVIEGNWTTYRSKILHYMRQMAVITPYAQFLFKFISDM---GEKNVTVLFARRTDVMPSVPLETKHHPSAVDLLLIKRLISETSKQN-LLQFLQHEFVKISKTFAERLIGEMGPDFSPTMSVKSLTSQQIVRIHQLFRQAKFDDPSGDCLSPAGEYNLRLGIIKELQPDMVATYAGSPQIFEGHPFIVEAGISLGGKDVKQGLNVFRFANRIPLLFEQGADVVTRTALKRINWSSYKINLMQDKIGVFVSIVSTKIPFKGTGKEYIGDDITEISFAVKTAIQQCCVQLKSKIVKKLQARERQERKRNLTRYIPDASNAIYDILEKISQNKETKRHCYEAEDNELLEKVSSQEITEISLRDRLTQHVEQVDYEMALEYAAQSG----------VSEEPREDIYVNSLDGSHNYIDFQSPIFVFRLCI 676
BLAST of Ggra8406.t1 vs. uniprot
Match: A0A200Q874 (DNA topoisomerase 6 subunit B n=2 Tax=Papaveroideae TaxID=1462614 RepID=A0A200Q874_9MAGN) HSP 1 Score: 597 bits (1538), Expect = 2.580e-197 Identity = 318/631 (50.40%), Postives = 419/631 (66.40%), Query Frame = 0
Query: 465 AEQQHLKFKSPAEFFAENKNIAGFDNAGKSLYTTIRELVENALDAAEAVHQLPRVSLLVQRIPPHRFRALVGMDAARERVDHSLYKDVENVKERRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKPSRQLPNDVFRVTVQDNGCGMAHHDVPNMMGRVLAGTKYCVRQARGKFGLGSKMALIWAKMSTGLPVHITTAQRGAP-ITECVLDIDITNNVPTVIKHTQTPNPKKWRGTIVAVTIDGNWSTYRSKILAYMRQMAVITPYAQFHFKFQSALHATGAKDFEAIFSRRTDHMPPSSREVKHHPSSVNQLILKQLIEQISPSTTLVRFLSSQFDAIPRTLAVRLINELGGDFTSHMTVKQLNLNHIRQIDALLHAVRFEKPSGSCLSPAGEYNLRLGITKELKPNLVATHAEPPDVFEGHPFIVEAGVALGGSGMKPGINIYRFANRIPLLFEAGNDVVTKTARDSIRWNNYKMSPTTDRIAVICSIVSTKIPFKGTGKEYIGDDSDAIKACVKRAISQCCLQLKTKLVRRAAQKDAAERKKTITKYAPDVANAIVGVFKELRDPEQSTR--------EVVDKVQSGQITKDSLINKLIEHVQQIDKEQAIECASAAG 1086
A++ LK KSPAEFFAENKNIAGFDN GKSLYTT+RELVEN+LD+AE++ +LP + + ++ I +F +++G+ RERVD +LY D E VK R + FRVT +DNG GMAH D+PNM GRVL+GTKY ++Q RGKFGLG+KMALIW+KMSTGLP+ I+++ RG ++ C LDIDI N+P + H + N ++W G + V I+GNW+TYRSKIL YMRQMAVITPYAQF FKF S + K+ F+RRTD MPP E KHHPS+V+ L++K+LI + S T L++FL +F I ++ A RLI E+G DF+ M VK L I +I L +F+ PSG CLSPAGEYNLRLGI KEL P++VAT++ P VFEGHPFIVEAG++LGG +K G+NI+RFANRIPLLFE G DVVT+TA I WNNYK++ T D+I V SIVSTKIPFKGTGKEYIGDD I + VK +I QCC+QLK+K++++ ++ ERK+ ++KY PD AI V +E+ S + E++ +V + ITK +L +KL +HV+Q+D E A++ A+ +G
Sbjct: 25 AKESVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPIIEVTIEEIGKSKFNSMIGL-VDRERVDEALYDDFETVKAREKRLAKEARDQENQAKNAALGKKVKEPAPLKGIKGRGEAS----------FFRVTCKDNGKGMAHDDIPNMFGRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMRGQNYVSFCRLDIDIHRNIPHIHLHEKRDNKERWHGAEIQVVIEGNWTTYRSKILHYMRQMAVITPYAQFLFKFVSDV---ADKNVTIRFARRTDVMPPVPIETKHHPSAVDLLLIKRLITETSKQT-LLQFLQHEFVNIGKSFAERLIGEMGPDFSPKMAVKSLTSQQIVRIHQLFRQAKFDDPSGDCLSPAGEYNLRLGIIKELHPDMVATYSGSPHVFEGHPFIVEAGLSLGGKDVKQGLNIFRFANRIPLLFEQGADVVTRTALKRINWNNYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIASAVKSSIQQCCVQLKSKIMKKIQAREQQERKRNLSKYIPDATGAIYDVLREMAQQHASKKKRYEGEDAEILKQVSARLITKQTLHDKLAKHVEQVDYEMALDYATQSG 640
BLAST of Ggra8406.t1 vs. uniprot
Match: TOP6B (DNA topoisomerase 6 subunit B n=36 Tax=Brassicaceae TaxID=3700 RepID=TOP6B_ARATH) HSP 1 Score: 596 bits (1536), Expect = 4.480e-197 Identity = 322/642 (50.16%), Postives = 419/642 (65.26%), Query Frame = 0
Query: 465 AEQQHLKFKSPAEFFAENKNIAGFDNAGKSLYTTIRELVENALDAAEAVHQLPRVSLLVQRIPPHRFRALVGMDAARERVDHSLYKDVENVKERRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKPSRQLPNDVFRVTVQDNGCGMAHHDVPNMMGRVLAGTKYCVRQARGKFGLGSKMALIWAKMSTGLPVHITTAQRGAP-ITECVLDIDITNNVPTVIKHTQTPNPKKWRGTIVAVTIDGNWSTYRSKILAYMRQMAVITPYAQFHFKFQSALHATGAKDFEAIFSRRTDHMPPSSREVKHHPSSVNQLILKQLIEQISPSTTLVRFLSSQFDAIPRTLAVRLINELGGDFTSHMTVKQLNLNHIRQIDALLHAVRFEKPSGSCLSPAGEYNLRLGITKELKPNLVATHAEPPDVFEGHPFIVEAGVALGGSGMKPGINIYRFANRIPLLFEAGNDVVTKTARDSIRWNNYKMSPTTDRIAVICSIVSTKIPFKGTGKEYIGDDSDAIKACVKRAISQCCLQLKTKLVRRAAQKDAAERKKTITKYAPDVANAIVGVFKELRDPEQSTRE--------VVDKVQSGQITKDSLINKLIEHVQQIDKEQAIECASAAGRHNKQIETAFL 1097
+ + LK KSPAEFFAENKNIAGFDN GKSLYTT+RELVENALD+AE++ +LP V + ++ I +F +++G+ RERVD LY D E K R + ++VT +DNG GM H D+PNM GRVL+GTKY ++Q RGKFGLG+KMALIW+KMSTGLP+ I+++ + +T C LDIDI N+P + H + N +KW G + V I+GNW+TYRSKIL YMRQMAVITPYAQF F+F S T K+ F+RRTD MPP E KHHPSSV+ L++K+LI S T L++FL ++F I +TLA RLI E+G DF M VK + + +I L +F+ PSG CLSPAGEYNLRLGI KEL P++VAT++ VFEGHPFIVEAGV+LGG +K GINI+RFANRIPLLFE G DVVT+TA I WN+YK++ T D+I V SIVSTKIPFKGTGKEYIGDD I VK AI QCC+QLK+K+V+R ++ ERK+++++Y PD A+ V K++ + ++ R+ ++DKV ITK++L KL EHV+Q+D E A+E A+ +G + E +L
Sbjct: 20 SNESKLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENALDSAESISELPEVEVTIEEIVKSKFNSMIGL-IDRERVDTQLYDDYETEKARGKRLAKEARASEIQAKNLASGKKNKEPGVSKVLKARGEAS----------YYKVTCKDNGKGMPHDDIPNMFGRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMKSQNYVTFCRLDIDIHRNIPHIHLHEKKGNKEKWHGAEIQVVIEGNWTTYRSKILHYMRQMAVITPYAQFLFRFISE---TPEKNVTIKFTRRTDVMPPIPIETKHHPSSVDLLLIKRLITDTSKKT-LLQFLQNEFVNINKTLAARLIGEMGPDFGPSMAVKSVTSQQMVRIHQLFRQAKFDDPSGDCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSLGGRDVKQGINIFRFANRIPLLFEQGADVVTRTALKRINWNSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIATAVKSAIQQCCIQLKSKIVKRLQAREQQERKRSLSRYIPDATGAVYEVLKQMTEEHKTKRKRYGEEDIVMLDKVSKQIITKETLKEKLAEHVEQVDYEMALEYATQSGVSEEPRENIYL 646 The following BLAST results are available for this feature:
BLAST of Ggra8406.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra8406.t1 ID=Ggra8406.t1|Name=Ggra8406.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1139bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|