Ggra653.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra653.t1
Unique NameGgra653.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length117
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000947_piloncontigtig00000947_pilon:461..811 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra653Ggra653Gracilaria gracilis GNS1m malegenetig00000947_pilon 461..811 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra653.t1.stop1Ggra653.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000947_pilon 461..463 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra653.t1.CDS1Ggra653.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000947_pilon 461..811 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra653.t1.exon1Ggra653.t1.exon1Gracilaria gracilis GNS1m maleexontig00000947_pilon 461..811 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra653.t1.start1Ggra653.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000947_pilon 809..811 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra653.t1Ggra653.t1Gracilaria gracilis GNS1m malepolypeptidetig00000947_pilon 461..811 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra653.t1 ID=Ggra653.t1|Name=Ggra653.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=117bp
MSVHSWWCRASEMMAVVVRKMRLASQQVGFLVVMQMPIEIGHHSQRVGSG
EATLISSEVKYCWYRVELELLIKMATQENQQYEEALIPTAPKMLYELGML
CWWAELANAAETQIDQ*
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spliced messenger RNA

>Ggra653.t1 ID=Ggra653.t1|Name=Ggra653.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=351bp|location=Sequence derived from alignment at tig00000947_pilon:461..811- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGGTGCACTCCTGGTGGTGCCGTGCGTCCGAAATGATGGCTGTGGT
GGTGAGAAAGATGCGACTGGCGTCGCAGCAGGTTGGGTTTCTAGTGGTGA
TGCAGATGCCAATAGAGATCGGTCACCATTCACAACGCGTTGGAAGTGGA
GAGGCGACATTGATAAGTTCGGAGGTGAAGTATTGTTGGTATCGCGTTGA
GCTGGAATTGTTGATCAAGATGGCAACGCAAGAGAATCAACAGTACGAAG
AGGCCCTGATTCCAACTGCGCCAAAGATGTTGTACGAGTTGGGAATGCTT
TGTTGGTGGGCTGAGTTGGCAAACGCGGCAGAAACACAGATTGACCAATA
G
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protein sequence of Ggra653.t1

>Ggra653.t1 ID=Ggra653.t1|Name=Ggra653.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=117bp
MSVHSWWCRASEMMAVVVRKMRLASQQVGFLVVMQMPIEIGHHSQRVGSG
EATLISSEVKYCWYRVELELLIKMATQENQQYEEALIPTAPKMLYELGML
CWWAELANAAETQIDQ*
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mRNA from alignment at tig00000947_pilon:461..811-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra653.t1 ID=Ggra653.t1|Name=Ggra653.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=351bp|location=Sequence derived from alignment at tig00000947_pilon:461..811- (Gracilaria gracilis GNS1m male)
ATGTCGGTGCACTCCTGGTGGTGCCGTGCGTCCGAAATGATGGCTGTGGT
GGTGAGAAAGATGCGACTGGCGTCGCAGCAGGTTGGGTTTCTAGTGGTGA
TGCAGATGCCAATAGAGATCGGTCACCATTCACAACGCGTTGGAAGTGGA
GAGGCGACATTGATAAGTTCGGAGGTGAAGTATTGTTGGTATCGCGTTGA
GCTGGAATTGTTGATCAAGATGGCAACGCAAGAGAATCAACAGTACGAAG
AGGCCCTGATTCCAACTGCGCCAAAGATGTTGTACGAGTTGGGAATGCTT
TGTTGGTGGGCTGAGTTGGCAAACGCGGCAGAAACACAGATTGACCAATA
G
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Coding sequence (CDS) from alignment at tig00000947_pilon:461..811-

>Ggra653.t1 ID=Ggra653.t1|Name=Ggra653.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=351bp|location=Sequence derived from alignment at tig00000947_pilon:461..811- (Gracilaria gracilis GNS1m male)
ATGTCGGTGCACTCCTGGTGGTGCCGTGCGTCCGAAATGATGGCTGTGGT
GGTGAGAAAGATGCGACTGGCGTCGCAGCAGGTTGGGTTTCTAGTGGTGA
TGCAGATGCCAATAGAGATCGGTCACCATTCACAACGCGTTGGAAGTGGA
GAGGCGACATTGATAAGTTCGGAGGTGAAGTATTGTTGGTATCGCGTTGA
GCTGGAATTGTTGATCAAGATGGCAACGCAAGAGAATCAACAGTACGAAG
AGGCCCTGATTCCAACTGCGCCAAAGATGTTGTACGAGTTGGGAATGCTT
TGTTGGTGGGCTGAGTTGGCAAACGCGGCAGAAACACAGATTGACCAATA
G
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