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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005703000.1 |
| Preferred name | PDXK |
| PFAMs | ATP-synt_ab,ATP-synt_ab_N,ATP-synt_ab_Xtn,Phos_pyr_kin |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00002,RC00017 |
| KEGG ko | ko:K00868,ko:K02145 |
| KEGG TC | 3.A.2.2 |
| KEGG Reaction | R00174,R01909,R02493 |
| KEGG Pathway | ko00190,ko00750,ko01100,ko04145,ko04150,ko04721,ko04966,ko05110,ko05120,ko05323,map00190,map00750,map01100,map04145,map04150,map04721,map04966,map05110,map05120,map05323 |
| KEGG Module | M00160 |
| GOs | GO:0000003,GO:0000166,GO:0000278,GO:0000281,GO:0000282,GO:0000287,GO:0000325,GO:0000910,GO:0001775,GO:0002020,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005773,GO:0005774,GO:0005794,GO:0005829,GO:0005886,GO:0005911,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006887,GO:0006950,GO:0006955,GO:0006970,GO:0006972,GO:0006996,GO:0007030,GO:0007049,GO:0007154,GO:0007163,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008283,GO:0008324,GO:0008478,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009267,GO:0009314,GO:0009443,GO:0009506,GO:0009507,GO:0009526,GO:0009536,GO:0009555,GO:0009605,GO:0009628,GO:0009636,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009888,GO:0009941,GO:0009987,GO:0009991,GO:0010015,GO:0010033,GO:0010053,GO:0010054,GO:0010165,GO:0010212,GO:0010243,GO:0010256,GO:0010941,GO:0012505,GO:0014070,GO:0014075,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017085,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019829,GO:0019842,GO:0019899,GO:0019954,GO:0022402,GO:0022622,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030010,GO:0030054,GO:0030141,GO:0030154,GO:0030170,GO:0030312,GO:0030554,GO:0030587,GO:0030955,GO:0031090,GO:0031152,GO:0031402,GO:0031403,GO:0031410,GO:0031420,GO:0031667,GO:0031668,GO:0031669,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0031983,GO:0032094,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032570,GO:0032940,GO:0033554,GO:0033993,GO:0034220,GO:0034284,GO:0034641,GO:0034774,GO:0035580,GO:0035639,GO:0036094,GO:0036230,GO:0036442,GO:0042119,GO:0042221,GO:0042364,GO:0042493,GO:0042538,GO:0042581,GO:0042594,GO:0042623,GO:0042625,GO:0042626,GO:0042802,GO:0042803,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043094,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043492,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044764,GO:0044769,GO:0045055,GO:0045321,GO:0046184,GO:0046483,GO:0046872,GO:0046903,GO:0046914,GO:0046961,GO:0046983,GO:0048037,GO:0048046,GO:0048229,GO:0048364,GO:0048519,GO:0048523,GO:0048545,GO:0048731,GO:0048856,GO:0048869,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051301,GO:0051703,GO:0051704,GO:0051716,GO:0055044,GO:0055085,GO:0060205,GO:0060548,GO:0061640,GO:0065007,GO:0070013,GO:0070279,GO:0070280,GO:0070887,GO:0071310,GO:0071322,GO:0071326,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0072524,GO:0072525,GO:0090407,GO:0090558,GO:0090627,GO:0090662,GO:0090702,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098630,GO:0098655,GO:0098660,GO:0098662,GO:0098743,GO:0098805,GO:0099120,GO:0099131,GO:0099132,GO:0099402,GO:0099503,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901654,GO:1901698,GO:1901700,GO:1901701,GO:1902600,GO:1903047,GO:1905392 |
| Evalue | 9e-317 |
| EggNOG OGs | COG1155@1|root,COG2240@1|root,KOG1352@2759|Eukaryota,KOG2599@2759|Eukaryota |
| EC | 2.7.1.35,3.6.3.14 |
| Description | pyridoxal 5'-phosphate salvage |
| COG category | H |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra4619.t1.start1 | Ggra4619.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000941_pilon 152816..152818 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra4619.t1.stop1 | Ggra4619.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000941_pilon 154866..154868 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra4619.t1 ID=Ggra4619.t1|Name=Ggra4619.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=616bp MGLGGSDGVSAMKMGVVRQVAGPVVTADEMDGAAMYELVAVGHLRLLGEI IRLAGSSATIQVYEETAGLTVGDPVERTAAPLSVELGPGLVGDIFDGVQR PLEKIAIRTGDMFIPRGVSVPALDRSKKWDFTPNPDFAIGDEVTAGDVYG TIPETELILHKLMVPPNQMGKITWIAPAGEYTIEETMIKLEFNGVEKPFN MIQKWPVRQPRPVTEKLRANTPLLTGQRVLDALFPSVQGGTCAIPGAFGC GKTVISQALSKFSNSDCIVYVGCGERGNEMAEVLKDFPELTIKVNNKDVS IMNRTLLVANTSNMPVAAREASIYTGITISEYFRDMGMNVAMMADSTSRW AEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVNCIGGPHREGSI TIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISY SKYQKALETFYEANYPEFVVLQQTVREILQKEDDLMEIVQLVGKDSLAEV DKITLETAKFIREDFLAQNSFTSYDRYCPFYKSVLMLRNMIAFHTLSTNA IESTYNSENKVTWALIKERLEAGKLMTKLSGMKFIEPTDEKEVRAELDAT HEELTAAFRDIEDLA* back to topspliced messenger RNA >Ggra4619.t1 ID=Ggra4619.t1|Name=Ggra4619.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1848bp|location=Sequence derived from alignment at tig00000941_pilon:152816..154868+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGGACTTGGTGGATCAGACGGTGTCTCCGCCATGAAGATGGGCGTTGT GCGTCAGGTCGCAGGACCTGTCGTAACCGCCGATGAAATGGACGGTGCTG CCATGTACGAGCTTGTCGCCGTGGGACATCTCAGACTCCTCGGCGAAATT ATTCGTCTCGCTGGCTCATCCGCCACAATCCAAGTGTACGAGGAAACGGC CGGTTTGACGGTCGGCGATCCAGTTGAAAGAACCGCCGCTCCACTTTCTG TTGAGCTTGGTCCGGGTCTTGTTGGGGACATTTTCGATGGTGTGCAGCGT CCTCTTGAGAAGATTGCTATCAGAACCGGCGATATGTTCATTCCTAGAGG AGTTTCAGTTCCTGCCCTTGACCGCTCAAAAAAGTGGGACTTCACTCCCA ACCCCGATTTTGCTATTGGTGATGAAGTCACTGCTGGAGACGTTTATGGT ACCATTCCGGAAACCGAACTCATCCTTCACAAGCTTATGGTTCCTCCGAA TCAGATGGGCAAGATCACCTGGATTGCTCCGGCTGGTGAGTACACAATTG AAGAAACCATGATCAAGCTCGAGTTCAACGGAGTCGAGAAGCCATTCAAT ATGATTCAGAAATGGCCTGTTCGTCAGCCCCGTCCGGTTACCGAGAAGCT GCGAGCCAATACCCCGCTCCTCACCGGACAGCGTGTCCTCGATGCGCTTT TCCCTTCTGTTCAAGGTGGTACTTGTGCCATCCCCGGTGCTTTTGGATGC GGAAAGACTGTCATTTCTCAGGCGTTGTCGAAATTCTCTAATTCTGACTG TATTGTCTACGTCGGATGTGGTGAACGTGGAAATGAAATGGCTGAGGTGT TGAAGGATTTCCCGGAACTAACCATCAAGGTCAACAACAAAGATGTTTCC ATCATGAACAGAACTTTGCTCGTTGCTAATACTTCTAACATGCCTGTCGC TGCTCGGGAGGCTTCTATATATACAGGTATTACTATCTCCGAGTACTTCA GAGATATGGGAATGAACGTGGCTATGATGGCTGATTCCACATCCCGCTGG GCTGAGGCCCTTCGTGAGATTTCTGGTCGTTTGGCGGAAATGCCTGCTGA TTCTGGCTATCCTGCGTACCTTGCAGCTCGTCTTGCTTCTTTCTACGAGC GTGCTGGAAAAGTGAACTGCATTGGGGGTCCGCACCGTGAAGGCTCTATT ACGATTGTCGGTGCTGTGTCCCCGCCAGGAGGCGATTTCTCTGATCCTGT AACCAGTGCTACACTGGGTATTGTGCAAGTGTTCTGGGGTCTTGACAAGA AACTCGCTCAGCGCAAGCATTTCCCATCCGTGAATTGGCTCATTTCCTAT TCGAAATATCAAAAGGCGTTGGAGACGTTTTATGAAGCAAATTACCCCGA GTTTGTTGTCTTGCAACAGACTGTTCGTGAGATTTTGCAGAAGGAAGACG ATTTGATGGAAATTGTGCAGCTTGTTGGTAAGGATTCCCTGGCAGAGGTC GACAAGATCACACTGGAAACTGCGAAGTTCATTAGAGAGGATTTCTTGGC CCAGAATTCTTTCACATCATACGATCGCTATTGTCCATTTTACAAATCCG TGCTCATGTTGAGAAACATGATCGCTTTCCATACTTTGTCTACCAACGCC ATCGAATCGACATACAATTCTGAAAACAAGGTTACTTGGGCACTTATTAA GGAAAGACTAGAGGCGGGCAAACTGATGACGAAGCTTAGTGGCATGAAGT TTATTGAACCTACGGATGAAAAGGAGGTGCGGGCAGAACTTGATGCCACC CACGAAGAGCTCACTGCCGCTTTCCGTGACATTGAGGATCTTGCCTAA back to topprotein sequence of Ggra4619.t1 >Ggra4619.t1 ID=Ggra4619.t1|Name=Ggra4619.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=616bp
MGLGGSDGVSAMKMGVVRQVAGPVVTADEMDGAAMYELVAVGHLRLLGEI IRLAGSSATIQVYEETAGLTVGDPVERTAAPLSVELGPGLVGDIFDGVQR PLEKIAIRTGDMFIPRGVSVPALDRSKKWDFTPNPDFAIGDEVTAGDVYG TIPETELILHKLMVPPNQMGKITWIAPAGEYTIEETMIKLEFNGVEKPFN MIQKWPVRQPRPVTEKLRANTPLLTGQRVLDALFPSVQGGTCAIPGAFGC GKTVISQALSKFSNSDCIVYVGCGERGNEMAEVLKDFPELTIKVNNKDVS IMNRTLLVANTSNMPVAAREASIYTGITISEYFRDMGMNVAMMADSTSRW AEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVNCIGGPHREGSI TIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISY SKYQKALETFYEANYPEFVVLQQTVREILQKEDDLMEIVQLVGKDSLAEV DKITLETAKFIREDFLAQNSFTSYDRYCPFYKSVLMLRNMIAFHTLSTNA IESTYNSENKVTWALIKERLEAGKLMTKLSGMKFIEPTDEKEVRAELDAT HEELTAAFRDIEDLA* back to topmRNA from alignment at tig00000941_pilon:152816..154868+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra4619.t1 ID=Ggra4619.t1|Name=Ggra4619.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2053bp|location=Sequence derived from alignment at tig00000941_pilon:152816..154868+ (Gracilaria gracilis GNS1m male) ATGGGACTTGGTGGATCAGACGGTGTCTCCGCCATGAAGATGGGCGTTGT
GCGTCAGGTCGCAGGACCTGTCGTAACCGCCGATGAAATGGACGGTGCTG
CCATGTACGAGCTTGTCGCCGTGGGACATCTCAGACTCCTCGGCGAAATT
ATTCGTCTCGCTGGCTCATCCGCCACAATCCAAGTGTACGAGGAAACGGC
CGGTTTGACGGTCGGCGATCCAGTTGAAAGAACCGCCGCTCCACTTTCTG
TTGAGCTTGGTCCGGGTCTTGTTGGGGACATTTTCGATGGTGTGCAGCGT
CCTCTTGAGAAGATTGCTATCAGAACCGGCGATATGTTCATTCCTAGAGG
AGTTTCAGTTCCTGCCCTTGACCGCTCAAAAAAGTGGGACTTCACTCCCA
ACCCCGATTTTGCTATTGGTGATGAAGTCACTGCTGGAGACGTTTATGGT
ACCATTCCGGAAACCGAACTCATCCTTCACAAGCTTATGGTTCCTCCGAA
TCAGATGGGCAAGATCACCTGGATTGCTCCGGCTGGTGAGGTAAGTTACG
ATCAGCGCCAAAATGATTTCGTTTAGGATTCTGTTGTTTAGATCACTGAC
GCGTCCCCTTCTTGCAACATATCAGTACACAATTGAAGAAACCATGATCA
AGCTCGAGTTCAACGGAGTCGAGAAGCCATTCAATATGATTCAGAAATGG
CCTGTTCGTCAGCCCCGTCCGGTTACCGAGAAGCTGCGAGCCAATACCCC
GCTCCTCACCGGACAGCGTGTCCTCGATGCGCTTTTCCCTTCTGTTCAAG
GTGGTACTTGTGCCATCCCCGGTGCTTTTGGATGCGGAAAGACTGTCATT
TCTCAGGCGTTGTCGAAATTCTCTAATTCTGACTGTATTGTCTACGTCGG
ATGGTAAGTTGCGATTGCTACAATATCGTTGAATTGTTCAGGTTTTCTTT
GTCGATAGCCACTAAGGGGTGACTTCAGTATCTCCATTACTAACTACAAG
TGTTCATCTCCCTAACAAAACAGTGGTGAACGTGGAAATGAAATGGCTGA
GGTGTTGAAGGATTTCCCGGAACTAACCATCAAGGTCAACAACAAAGATG
TTTCCATCATGAACAGAACTTTGCTCGTTGCTAATACTTCTAACATGCCT
GTCGCTGCTCGGGAGGCTTCTATATATACAGGTATTACTATCTCCGAGTA
CTTCAGAGATATGGGAATGAACGTGGCTATGATGGCTGATTCCACATCCC
GCTGGGCTGAGGCCCTTCGTGAGATTTCTGGTCGTTTGGCGGAAATGCCT
GCTGATTCTGGCTATCCTGCGTACCTTGCAGCTCGTCTTGCTTCTTTCTA
CGAGCGTGCTGGAAAAGTGAACTGCATTGGGGGTCCGCACCGTGAAGGCT
CTATTACGATTGTCGGTGCTGTGTCCCCGCCAGGAGGCGATTTCTCTGAT
CCTGTAACCAGTGCTACACTGGGTATTGTGCAAGTGTTCTGGGGTCTTGA
CAAGAAACTCGCTCAGCGCAAGCATTTCCCATCCGTGAATTGGCTCATTT
CCTATTCGAAATATCAAAAGGCGTTGGAGACGTTTTATGAAGCAAATTAC
CCCGAGTTTGTTGTCTTGCAACAGACTGTTCGTGAGATTTTGCAGAAGGA
AGACGATTTGATGGAAATTGTGCAGCTTGTTGGTAAGGATTCCCTGGCAG
AGGTCGACAAGATCACACTGGAAACTGCGAAGTTCATTAGAGAGGATTTC
TTGGCCCAGAATTCTTTCACATCATACGATCGCTATTGTCCATTTTACAA
ATCCGTGCTCATGTTGAGAAACATGATCGCTTTCCATACTTTGTCTACCA
ACGCCATCGAATCGACATACAATTCTGAAAACAAGGTTACTTGGGCACTT
ATTAAGGAAAGACTAGAGGCGGGCAAACTGATGACGAAGCTTAGTGGCAT
GAAGTTTATTGAACCTACGGATGAAAAGGAGGTGCGGGCAGAACTTGATG
CCACCCACGAAGAGCTCACTGCCGCTTTCCGTGACATTGAGGATCTTGCC
TAA back to topCoding sequence (CDS) from alignment at tig00000941_pilon:152816..154868+ >Ggra4619.t1 ID=Ggra4619.t1|Name=Ggra4619.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1848bp|location=Sequence derived from alignment at tig00000941_pilon:152816..154868+ (Gracilaria gracilis GNS1m male) ATGGGACTTGGTGGATCAGACGGTGTCTCCGCCATGAAGATGGGCGTTGT GCGTCAGGTCGCAGGACCTGTCGTAACCGCCGATGAAATGGACGGTGCTG CCATGTACGAGCTTGTCGCCGTGGGACATCTCAGACTCCTCGGCGAAATT ATTCGTCTCGCTGGCTCATCCGCCACAATCCAAGTGTACGAGGAAACGGC CGGTTTGACGGTCGGCGATCCAGTTGAAAGAACCGCCGCTCCACTTTCTG TTGAGCTTGGTCCGGGTCTTGTTGGGGACATTTTCGATGGTGTGCAGCGT CCTCTTGAGAAGATTGCTATCAGAACCGGCGATATGTTCATTCCTAGAGG AGTTTCAGTTCCTGCCCTTGACCGCTCAAAAAAGTGGGACTTCACTCCCA ACCCCGATTTTGCTATTGGTGATGAAGTCACTGCTGGAGACGTTTATGGT ACCATTCCGGAAACCGAACTCATCCTTCACAAGCTTATGGTTCCTCCGAA TCAGATGGGCAAGATCACCTGGATTGCTCCGGCTGGTGAGTACACAATTG AAGAAACCATGATCAAGCTCGAGTTCAACGGAGTCGAGAAGCCATTCAAT ATGATTCAGAAATGGCCTGTTCGTCAGCCCCGTCCGGTTACCGAGAAGCT GCGAGCCAATACCCCGCTCCTCACCGGACAGCGTGTCCTCGATGCGCTTT TCCCTTCTGTTCAAGGTGGTACTTGTGCCATCCCCGGTGCTTTTGGATGC GGAAAGACTGTCATTTCTCAGGCGTTGTCGAAATTCTCTAATTCTGACTG TATTGTCTACGTCGGATGTGGTGAACGTGGAAATGAAATGGCTGAGGTGT TGAAGGATTTCCCGGAACTAACCATCAAGGTCAACAACAAAGATGTTTCC ATCATGAACAGAACTTTGCTCGTTGCTAATACTTCTAACATGCCTGTCGC TGCTCGGGAGGCTTCTATATATACAGGTATTACTATCTCCGAGTACTTCA GAGATATGGGAATGAACGTGGCTATGATGGCTGATTCCACATCCCGCTGG GCTGAGGCCCTTCGTGAGATTTCTGGTCGTTTGGCGGAAATGCCTGCTGA TTCTGGCTATCCTGCGTACCTTGCAGCTCGTCTTGCTTCTTTCTACGAGC GTGCTGGAAAAGTGAACTGCATTGGGGGTCCGCACCGTGAAGGCTCTATT ACGATTGTCGGTGCTGTGTCCCCGCCAGGAGGCGATTTCTCTGATCCTGT AACCAGTGCTACACTGGGTATTGTGCAAGTGTTCTGGGGTCTTGACAAGA AACTCGCTCAGCGCAAGCATTTCCCATCCGTGAATTGGCTCATTTCCTAT TCGAAATATCAAAAGGCGTTGGAGACGTTTTATGAAGCAAATTACCCCGA GTTTGTTGTCTTGCAACAGACTGTTCGTGAGATTTTGCAGAAGGAAGACG ATTTGATGGAAATTGTGCAGCTTGTTGGTAAGGATTCCCTGGCAGAGGTC GACAAGATCACACTGGAAACTGCGAAGTTCATTAGAGAGGATTTCTTGGC CCAGAATTCTTTCACATCATACGATCGCTATTGTCCATTTTACAAATCCG TGCTCATGTTGAGAAACATGATCGCTTTCCATACTTTGTCTACCAACGCC ATCGAATCGACATACAATTCTGAAAACAAGGTTACTTGGGCACTTATTAA GGAAAGACTAGAGGCGGGCAAACTGATGACGAAGCTTAGTGGCATGAAGT TTATTGAACCTACGGATGAAAAGGAGGTGCGGGCAGAACTTGATGCCACC CACGAAGAGCTCACTGCCGCTTTCCGTGACATTGAGGATCTTGCCTAA back to top
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