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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 43229.XP_007721680.1 |
| Preferred name | ARP5 |
| PFAMs | Actin |
| Max annot lvl | 4751|Fungi |
| KEGG ko | ko:K11672 |
| GOs | GO:0000228,GO:0000785,GO:0000790,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006325,GO:0006338,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0031011,GO:0031974,GO:0031981,GO:0032991,GO:0033202,GO:0034728,GO:0042766,GO:0043044,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0051276,GO:0060303,GO:0065007,GO:0065008,GO:0070013,GO:0070603,GO:0071824,GO:0071840,GO:0097346,GO:1902494,GO:1904949 |
| Evalue | 1.15e-67 |
| EggNOG OGs | KOG0681@1|root,KOG0681@2759|Eukaryota,38HNM@33154|Opisthokonta,3NVG1@4751|Fungi,3QMKH@4890|Ascomycota,20CYW@147545|Eurotiomycetes,3MQ40@451870|Chaetothyriomycetidae |
| Description | Belongs to the actin family |
| COG category | Z |
| BRITE | ko00000,ko03036 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra4607.t1.stop1 | Ggra4607.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000941_pilon 107160..107162 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra4607.t1.start1 | Ggra4607.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000941_pilon 109623..109625 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra4607.t1 ID=Ggra4607.t1|Name=Ggra4607.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=822bp MAGQKARKRADPDFFLDDPPPLHNHPITPDQYRTNDVYSSSKAIVFDLGS STLRAGFSRCPEPQMQLPPYVARLKDPETGIRTFLIGTDALTSSARSTAK PAYKSGLPNNPALMERLLDGTLAGLGLADEARVNHSFVLTEAPMQPNSAR ALMMELIFEAYEAPSICFGVDALFSYYWNCKARSGLSFANRSGCVVSCGY YSTHVLPIVEGRLHSQGVKRINVGGSDMTDQFTRRLQLLNQEHASVLSTN RCELLKEKMCYVSEDYDNELLKIQTDVDYYNKITKTVKVPTGDGAEKPPL TAEEKERLKQARSENGRRLSEMMKEKRRARKERGSGTDEAAESISYTEEE VKPFYETMKGFYQLKRIEAMRELDEDGYYLALSNLGMETTSALLAEIDKR QEKLDDERERLGEGKARAAEEAWWKRIYEDELLSMSDSELNPAELKRKRQ IRAWRGAAEARERAKRAKEAEKAEKERLAEEKRKMKEERPREYLAGLRKE RETLAGRIKKRKAARAAGSDRRSQAARERMRLLAQHAGNKPGFDDGPGKG RGRGRGRGRRTRGRGRGRGRGRGGKKAKADMDDDNFGWNDEDWDVYRSMR VGGNETDSDDNSADERARLQAVREEITELAPNEVDPTVSRPEGVALLYEE NKYADEFAVTVDRIRTPELMFQPTLVGVEQCGLIEALRLGSGKRGDIVKE VFVSGGVARTSGLRERICAELRRCFPSEWGDDIERGVRFAQDPVLDAWKG AALFAEQGGELFEKACITKAEFEEMGNGYLKEHALSNVFVRTPVLSAADL ELKKKMQKQASKRGRSRSILG* back to topspliced messenger RNA >Ggra4607.t1 ID=Ggra4607.t1|Name=Ggra4607.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2466bp|location=Sequence derived from alignment at tig00000941_pilon:107160..109625- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCTGGCCAGAAGGCTCGCAAACGAGCAGACCCAGACTTTTTTCTAGA TGATCCTCCTCCACTTCACAACCATCCAATAACTCCGGACCAGTATCGTA CAAATGATGTATACTCTTCGTCGAAAGCGATCGTTTTCGACTTGGGTTCG TCCACCCTTCGAGCTGGATTCTCGCGTTGCCCCGAGCCTCAAATGCAGCT CCCACCGTATGTGGCTCGTTTGAAAGACCCTGAAACCGGTATACGAACTT TCCTCATCGGCACAGATGCGTTGACTTCCTCCGCGCGCTCAACTGCGAAA CCGGCGTACAAATCAGGTTTACCAAATAATCCTGCGCTCATGGAGAGATT ATTGGACGGAACTCTGGCTGGTTTAGGATTGGCAGATGAGGCGCGTGTCA ATCACAGCTTCGTTCTGACCGAAGCCCCAATGCAGCCCAATTCGGCGCGA GCTTTGATGATGGAGTTGATTTTTGAGGCCTACGAAGCTCCTTCCATATG CTTTGGCGTCGACGCCTTATTCAGTTATTATTGGAACTGCAAAGCGCGCA GTGGTCTTTCATTTGCGAATCGAAGCGGCTGCGTTGTGTCGTGCGGCTAT TATTCTACCCATGTCTTACCAATCGTTGAAGGAAGACTACACTCACAGGG TGTTAAGCGAATAAATGTTGGAGGCTCAGATATGACGGACCAATTCACGA GAAGGCTGCAATTGCTCAATCAAGAACACGCAAGCGTCTTATCAACAAAT CGTTGCGAACTTTTGAAAGAAAAGATGTGTTATGTGTCGGAGGATTATGA TAACGAACTGCTAAAGATACAAACTGATGTCGATTATTATAACAAAATCA CTAAAACGGTCAAGGTTCCCACTGGTGACGGCGCCGAGAAACCCCCCCTT ACTGCGGAGGAAAAGGAAAGACTGAAACAAGCACGAAGTGAGAACGGGCG TCGTTTAAGCGAAATGATGAAGGAAAAGCGCCGTGCTCGGAAGGAAAGAG GTTCCGGTACGGATGAAGCAGCCGAGAGCATATCGTATACCGAAGAGGAG GTAAAACCGTTCTACGAGACTATGAAGGGTTTCTACCAATTGAAGCGAAT CGAAGCAATGCGAGAACTGGACGAGGACGGTTACTATCTTGCCCTATCAA ATCTGGGCATGGAGACAACGTCTGCGCTGTTGGCTGAGATCGATAAGAGA CAAGAAAAGCTTGACGATGAACGAGAGAGGCTTGGTGAAGGCAAAGCTCG CGCAGCCGAAGAAGCTTGGTGGAAACGCATATATGAGGACGAACTATTGT CCATGTCTGATTCAGAACTCAACCCAGCCGAACTTAAGCGGAAACGACAG ATACGCGCATGGCGCGGCGCTGCAGAAGCAAGAGAGCGAGCAAAGCGAGC AAAGGAGGCGGAAAAGGCTGAAAAAGAACGACTAGCGGAGGAGAAACGAA AGATGAAAGAGGAACGACCGCGAGAGTATCTGGCAGGTCTTCGAAAAGAA CGAGAAACATTAGCAGGACGCATCAAGAAAAGGAAGGCAGCTCGCGCAGC AGGCTCTGACAGAAGGTCACAGGCGGCTCGAGAACGAATGCGTTTACTGG CTCAACACGCTGGGAACAAACCTGGATTCGACGACGGTCCTGGGAAGGGA AGGGGTCGTGGAAGAGGACGCGGACGAAGGACAAGAGGTCGAGGGAGAGG AAGAGGGCGGGGGCGGGGCGGAAAGAAAGCAAAGGCTGACATGGACGACG ATAACTTTGGATGGAACGATGAGGATTGGGACGTGTACAGGTCAATGAGA GTGGGAGGCAACGAGACTGACTCAGATGACAACTCTGCGGACGAGAGAGC ACGATTGCAGGCTGTGCGAGAGGAAATCACGGAATTGGCACCCAATGAAG TGGATCCGACCGTCTCGCGGCCGGAGGGCGTTGCGCTGTTGTACGAAGAG AACAAATATGCGGACGAATTCGCGGTGACTGTGGACAGGATCCGAACGCC GGAGCTGATGTTTCAGCCGACATTGGTGGGCGTGGAGCAGTGCGGGCTGA TCGAAGCGCTGCGACTGGGCAGTGGGAAACGGGGGGACATTGTGAAGGAA GTGTTCGTGAGTGGAGGAGTGGCGCGGACGTCTGGACTGCGTGAACGAAT CTGCGCGGAGTTGAGACGGTGCTTCCCGTCTGAATGGGGCGACGACATCG AGCGGGGGGTGAGGTTCGCGCAGGACCCGGTGCTGGACGCGTGGAAAGGC GCAGCGCTGTTCGCCGAGCAGGGCGGCGAGTTGTTCGAGAAGGCATGCAT CACGAAGGCGGAGTTCGAGGAGATGGGCAACGGGTACCTCAAGGAGCACG CGCTAAGCAACGTGTTCGTGCGGACGCCCGTGCTGTCGGCGGCGGACCTG GAGCTGAAGAAGAAGATGCAGAAGCAGGCGAGCAAGCGCGGGCGGTCGCG CTCCATCCTGGGCTGA back to topprotein sequence of Ggra4607.t1 >Ggra4607.t1 ID=Ggra4607.t1|Name=Ggra4607.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=822bp
MAGQKARKRADPDFFLDDPPPLHNHPITPDQYRTNDVYSSSKAIVFDLGS STLRAGFSRCPEPQMQLPPYVARLKDPETGIRTFLIGTDALTSSARSTAK PAYKSGLPNNPALMERLLDGTLAGLGLADEARVNHSFVLTEAPMQPNSAR ALMMELIFEAYEAPSICFGVDALFSYYWNCKARSGLSFANRSGCVVSCGY YSTHVLPIVEGRLHSQGVKRINVGGSDMTDQFTRRLQLLNQEHASVLSTN RCELLKEKMCYVSEDYDNELLKIQTDVDYYNKITKTVKVPTGDGAEKPPL TAEEKERLKQARSENGRRLSEMMKEKRRARKERGSGTDEAAESISYTEEE VKPFYETMKGFYQLKRIEAMRELDEDGYYLALSNLGMETTSALLAEIDKR QEKLDDERERLGEGKARAAEEAWWKRIYEDELLSMSDSELNPAELKRKRQ IRAWRGAAEARERAKRAKEAEKAEKERLAEEKRKMKEERPREYLAGLRKE RETLAGRIKKRKAARAAGSDRRSQAARERMRLLAQHAGNKPGFDDGPGKG RGRGRGRGRRTRGRGRGRGRGRGGKKAKADMDDDNFGWNDEDWDVYRSMR VGGNETDSDDNSADERARLQAVREEITELAPNEVDPTVSRPEGVALLYEE NKYADEFAVTVDRIRTPELMFQPTLVGVEQCGLIEALRLGSGKRGDIVKE VFVSGGVARTSGLRERICAELRRCFPSEWGDDIERGVRFAQDPVLDAWKG AALFAEQGGELFEKACITKAEFEEMGNGYLKEHALSNVFVRTPVLSAADL ELKKKMQKQASKRGRSRSILG* back to topmRNA from alignment at tig00000941_pilon:107160..109625- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra4607.t1 ID=Ggra4607.t1|Name=Ggra4607.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2466bp|location=Sequence derived from alignment at tig00000941_pilon:107160..109625- (Gracilaria gracilis GNS1m male) ATGGCTGGCCAGAAGGCTCGCAAACGAGCAGACCCAGACTTTTTTCTAGA
TGATCCTCCTCCACTTCACAACCATCCAATAACTCCGGACCAGTATCGTA
CAAATGATGTATACTCTTCGTCGAAAGCGATCGTTTTCGACTTGGGTTCG
TCCACCCTTCGAGCTGGATTCTCGCGTTGCCCCGAGCCTCAAATGCAGCT
CCCACCGTATGTGGCTCGTTTGAAAGACCCTGAAACCGGTATACGAACTT
TCCTCATCGGCACAGATGCGTTGACTTCCTCCGCGCGCTCAACTGCGAAA
CCGGCGTACAAATCAGGTTTACCAAATAATCCTGCGCTCATGGAGAGATT
ATTGGACGGAACTCTGGCTGGTTTAGGATTGGCAGATGAGGCGCGTGTCA
ATCACAGCTTCGTTCTGACCGAAGCCCCAATGCAGCCCAATTCGGCGCGA
GCTTTGATGATGGAGTTGATTTTTGAGGCCTACGAAGCTCCTTCCATATG
CTTTGGCGTCGACGCCTTATTCAGTTATTATTGGAACTGCAAAGCGCGCA
GTGGTCTTTCATTTGCGAATCGAAGCGGCTGCGTTGTGTCGTGCGGCTAT
TATTCTACCCATGTCTTACCAATCGTTGAAGGAAGACTACACTCACAGGG
TGTTAAGCGAATAAATGTTGGAGGCTCAGATATGACGGACCAATTCACGA
GAAGGCTGCAATTGCTCAATCAAGAACACGCAAGCGTCTTATCAACAAAT
CGTTGCGAACTTTTGAAAGAAAAGATGTGTTATGTGTCGGAGGATTATGA
TAACGAACTGCTAAAGATACAAACTGATGTCGATTATTATAACAAAATCA
CTAAAACGGTCAAGGTTCCCACTGGTGACGGCGCCGAGAAACCCCCCCTT
ACTGCGGAGGAAAAGGAAAGACTGAAACAAGCACGAAGTGAGAACGGGCG
TCGTTTAAGCGAAATGATGAAGGAAAAGCGCCGTGCTCGGAAGGAAAGAG
GTTCCGGTACGGATGAAGCAGCCGAGAGCATATCGTATACCGAAGAGGAG
GTAAAACCGTTCTACGAGACTATGAAGGGTTTCTACCAATTGAAGCGAAT
CGAAGCAATGCGAGAACTGGACGAGGACGGTTACTATCTTGCCCTATCAA
ATCTGGGCATGGAGACAACGTCTGCGCTGTTGGCTGAGATCGATAAGAGA
CAAGAAAAGCTTGACGATGAACGAGAGAGGCTTGGTGAAGGCAAAGCTCG
CGCAGCCGAAGAAGCTTGGTGGAAACGCATATATGAGGACGAACTATTGT
CCATGTCTGATTCAGAACTCAACCCAGCCGAACTTAAGCGGAAACGACAG
ATACGCGCATGGCGCGGCGCTGCAGAAGCAAGAGAGCGAGCAAAGCGAGC
AAAGGAGGCGGAAAAGGCTGAAAAAGAACGACTAGCGGAGGAGAAACGAA
AGATGAAAGAGGAACGACCGCGAGAGTATCTGGCAGGTCTTCGAAAAGAA
CGAGAAACATTAGCAGGACGCATCAAGAAAAGGAAGGCAGCTCGCGCAGC
AGGCTCTGACAGAAGGTCACAGGCGGCTCGAGAACGAATGCGTTTACTGG
CTCAACACGCTGGGAACAAACCTGGATTCGACGACGGTCCTGGGAAGGGA
AGGGGTCGTGGAAGAGGACGCGGACGAAGGACAAGAGGTCGAGGGAGAGG
AAGAGGGCGGGGGCGGGGCGGAAAGAAAGCAAAGGCTGACATGGACGACG
ATAACTTTGGATGGAACGATGAGGATTGGGACGTGTACAGGTCAATGAGA
GTGGGAGGCAACGAGACTGACTCAGATGACAACTCTGCGGACGAGAGAGC
ACGATTGCAGGCTGTGCGAGAGGAAATCACGGAATTGGCACCCAATGAAG
TGGATCCGACCGTCTCGCGGCCGGAGGGCGTTGCGCTGTTGTACGAAGAG
AACAAATATGCGGACGAATTCGCGGTGACTGTGGACAGGATCCGAACGCC
GGAGCTGATGTTTCAGCCGACATTGGTGGGCGTGGAGCAGTGCGGGCTGA
TCGAAGCGCTGCGACTGGGCAGTGGGAAACGGGGGGACATTGTGAAGGAA
GTGTTCGTGAGTGGAGGAGTGGCGCGGACGTCTGGACTGCGTGAACGAAT
CTGCGCGGAGTTGAGACGGTGCTTCCCGTCTGAATGGGGCGACGACATCG
AGCGGGGGGTGAGGTTCGCGCAGGACCCGGTGCTGGACGCGTGGAAAGGC
GCAGCGCTGTTCGCCGAGCAGGGCGGCGAGTTGTTCGAGAAGGCATGCAT
CACGAAGGCGGAGTTCGAGGAGATGGGCAACGGGTACCTCAAGGAGCACG
CGCTAAGCAACGTGTTCGTGCGGACGCCCGTGCTGTCGGCGGCGGACCTG
GAGCTGAAGAAGAAGATGCAGAAGCAGGCGAGCAAGCGCGGGCGGTCGCG
CTCCATCCTGGGCTGA back to topCoding sequence (CDS) from alignment at tig00000941_pilon:107160..109625- >Ggra4607.t1 ID=Ggra4607.t1|Name=Ggra4607.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2466bp|location=Sequence derived from alignment at tig00000941_pilon:107160..109625- (Gracilaria gracilis GNS1m male) ATGGCTGGCCAGAAGGCTCGCAAACGAGCAGACCCAGACTTTTTTCTAGA TGATCCTCCTCCACTTCACAACCATCCAATAACTCCGGACCAGTATCGTA CAAATGATGTATACTCTTCGTCGAAAGCGATCGTTTTCGACTTGGGTTCG TCCACCCTTCGAGCTGGATTCTCGCGTTGCCCCGAGCCTCAAATGCAGCT CCCACCGTATGTGGCTCGTTTGAAAGACCCTGAAACCGGTATACGAACTT TCCTCATCGGCACAGATGCGTTGACTTCCTCCGCGCGCTCAACTGCGAAA CCGGCGTACAAATCAGGTTTACCAAATAATCCTGCGCTCATGGAGAGATT ATTGGACGGAACTCTGGCTGGTTTAGGATTGGCAGATGAGGCGCGTGTCA ATCACAGCTTCGTTCTGACCGAAGCCCCAATGCAGCCCAATTCGGCGCGA GCTTTGATGATGGAGTTGATTTTTGAGGCCTACGAAGCTCCTTCCATATG CTTTGGCGTCGACGCCTTATTCAGTTATTATTGGAACTGCAAAGCGCGCA GTGGTCTTTCATTTGCGAATCGAAGCGGCTGCGTTGTGTCGTGCGGCTAT TATTCTACCCATGTCTTACCAATCGTTGAAGGAAGACTACACTCACAGGG TGTTAAGCGAATAAATGTTGGAGGCTCAGATATGACGGACCAATTCACGA GAAGGCTGCAATTGCTCAATCAAGAACACGCAAGCGTCTTATCAACAAAT CGTTGCGAACTTTTGAAAGAAAAGATGTGTTATGTGTCGGAGGATTATGA TAACGAACTGCTAAAGATACAAACTGATGTCGATTATTATAACAAAATCA CTAAAACGGTCAAGGTTCCCACTGGTGACGGCGCCGAGAAACCCCCCCTT ACTGCGGAGGAAAAGGAAAGACTGAAACAAGCACGAAGTGAGAACGGGCG TCGTTTAAGCGAAATGATGAAGGAAAAGCGCCGTGCTCGGAAGGAAAGAG GTTCCGGTACGGATGAAGCAGCCGAGAGCATATCGTATACCGAAGAGGAG GTAAAACCGTTCTACGAGACTATGAAGGGTTTCTACCAATTGAAGCGAAT CGAAGCAATGCGAGAACTGGACGAGGACGGTTACTATCTTGCCCTATCAA ATCTGGGCATGGAGACAACGTCTGCGCTGTTGGCTGAGATCGATAAGAGA CAAGAAAAGCTTGACGATGAACGAGAGAGGCTTGGTGAAGGCAAAGCTCG CGCAGCCGAAGAAGCTTGGTGGAAACGCATATATGAGGACGAACTATTGT CCATGTCTGATTCAGAACTCAACCCAGCCGAACTTAAGCGGAAACGACAG ATACGCGCATGGCGCGGCGCTGCAGAAGCAAGAGAGCGAGCAAAGCGAGC AAAGGAGGCGGAAAAGGCTGAAAAAGAACGACTAGCGGAGGAGAAACGAA AGATGAAAGAGGAACGACCGCGAGAGTATCTGGCAGGTCTTCGAAAAGAA CGAGAAACATTAGCAGGACGCATCAAGAAAAGGAAGGCAGCTCGCGCAGC AGGCTCTGACAGAAGGTCACAGGCGGCTCGAGAACGAATGCGTTTACTGG CTCAACACGCTGGGAACAAACCTGGATTCGACGACGGTCCTGGGAAGGGA AGGGGTCGTGGAAGAGGACGCGGACGAAGGACAAGAGGTCGAGGGAGAGG AAGAGGGCGGGGGCGGGGCGGAAAGAAAGCAAAGGCTGACATGGACGACG ATAACTTTGGATGGAACGATGAGGATTGGGACGTGTACAGGTCAATGAGA GTGGGAGGCAACGAGACTGACTCAGATGACAACTCTGCGGACGAGAGAGC ACGATTGCAGGCTGTGCGAGAGGAAATCACGGAATTGGCACCCAATGAAG TGGATCCGACCGTCTCGCGGCCGGAGGGCGTTGCGCTGTTGTACGAAGAG AACAAATATGCGGACGAATTCGCGGTGACTGTGGACAGGATCCGAACGCC GGAGCTGATGTTTCAGCCGACATTGGTGGGCGTGGAGCAGTGCGGGCTGA TCGAAGCGCTGCGACTGGGCAGTGGGAAACGGGGGGACATTGTGAAGGAA GTGTTCGTGAGTGGAGGAGTGGCGCGGACGTCTGGACTGCGTGAACGAAT CTGCGCGGAGTTGAGACGGTGCTTCCCGTCTGAATGGGGCGACGACATCG AGCGGGGGGTGAGGTTCGCGCAGGACCCGGTGCTGGACGCGTGGAAAGGC GCAGCGCTGTTCGCCGAGCAGGGCGGCGAGTTGTTCGAGAAGGCATGCAT CACGAAGGCGGAGTTCGAGGAGATGGGCAACGGGTACCTCAAGGAGCACG CGCTAAGCAACGTGTTCGTGCGGACGCCCGTGCTGTCGGCGGCGGACCTG GAGCTGAAGAAGAAGATGCAGAAGCAGGCGAGCAAGCGCGGGCGGTCGCG CTCCATCCTGGGCTGA back to top
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