Ggra4612.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4612.t1
Unique NameGgra4612.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length201
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000941_piloncontigtig00000941_pilon:131991..132593 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4612Ggra4612Gracilaria gracilis GNS1m malegenetig00000941_pilon 131991..132593 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4612.t1.stop1Ggra4612.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000941_pilon 131991..131993 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4612.t1.CDS1Ggra4612.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000941_pilon 131991..132593 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4612.t1.exon1Ggra4612.t1.exon1Gracilaria gracilis GNS1m maleexontig00000941_pilon 131991..132593 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4612.t1.start1Ggra4612.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000941_pilon 132591..132593 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4612.t1Ggra4612.t1Gracilaria gracilis GNS1m malepolypeptidetig00000941_pilon 131991..132593 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4612.t1 ID=Ggra4612.t1|Name=Ggra4612.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=201bp
MQQYQTVTHQNAPITTFLPLCPPCPCSALSSPSLRGLCSFRRLKSPCARH
TVPRRKRVRISAEQAQTPDTPSDEGKAGSPPEPKPVKEEDEEDFHIPLPN
AFEVNGDARCVQCSGKGEIDCPVCSGSGFLTLTLMDTVSSSQCRMCLGRK
IIPCPTCRQIVFKSVLWWDQIPSAEEDPEEKWRDGPDGPKFGWGGNPAGS
*
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spliced messenger RNA

>Ggra4612.t1 ID=Ggra4612.t1|Name=Ggra4612.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=603bp|location=Sequence derived from alignment at tig00000941_pilon:131991..132593- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAACAATATCAAACCGTAACTCACCAGAATGCTCCTATAACCACTTT
TTTGCCACTGTGTCCACCGTGCCCGTGCTCCGCGCTCTCATCGCCATCGC
TCCGAGGCTTATGTTCATTTCGACGGTTGAAGAGTCCTTGTGCGCGGCAT
ACGGTTCCGAGGAGGAAGAGGGTTCGTATTTCGGCTGAGCAGGCTCAAAC
TCCTGACACTCCAAGCGACGAAGGGAAAGCGGGGAGTCCCCCAGAACCCA
AGCCGGTTAAGGAAGAAGATGAAGAGGACTTTCACATCCCTTTGCCAAAT
GCGTTCGAAGTAAATGGGGATGCTCGCTGCGTGCAATGCTCGGGGAAAGG
TGAAATTGACTGTCCTGTATGCAGTGGAAGTGGATTCTTAACGCTAACCC
TTATGGATACCGTTAGTTCGTCACAATGTCGTATGTGCCTGGGGCGCAAG
ATTATTCCGTGTCCTACTTGTAGGCAGATTGTTTTCAAGTCTGTCTTGTG
GTGGGATCAGATTCCTTCTGCTGAGGAAGACCCGGAAGAGAAGTGGAGAG
ATGGTCCAGATGGTCCTAAGTTTGGATGGGGTGGAAATCCTGCGGGTTCA
TAA
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protein sequence of Ggra4612.t1

>Ggra4612.t1 ID=Ggra4612.t1|Name=Ggra4612.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=201bp
MQQYQTVTHQNAPITTFLPLCPPCPCSALSSPSLRGLCSFRRLKSPCARH
TVPRRKRVRISAEQAQTPDTPSDEGKAGSPPEPKPVKEEDEEDFHIPLPN
AFEVNGDARCVQCSGKGEIDCPVCSGSGFLTLTLMDTVSSSQCRMCLGRK
IIPCPTCRQIVFKSVLWWDQIPSAEEDPEEKWRDGPDGPKFGWGGNPAGS
*
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mRNA from alignment at tig00000941_pilon:131991..132593-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4612.t1 ID=Ggra4612.t1|Name=Ggra4612.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=603bp|location=Sequence derived from alignment at tig00000941_pilon:131991..132593- (Gracilaria gracilis GNS1m male)
ATGCAACAATATCAAACCGTAACTCACCAGAATGCTCCTATAACCACTTT
TTTGCCACTGTGTCCACCGTGCCCGTGCTCCGCGCTCTCATCGCCATCGC
TCCGAGGCTTATGTTCATTTCGACGGTTGAAGAGTCCTTGTGCGCGGCAT
ACGGTTCCGAGGAGGAAGAGGGTTCGTATTTCGGCTGAGCAGGCTCAAAC
TCCTGACACTCCAAGCGACGAAGGGAAAGCGGGGAGTCCCCCAGAACCCA
AGCCGGTTAAGGAAGAAGATGAAGAGGACTTTCACATCCCTTTGCCAAAT
GCGTTCGAAGTAAATGGGGATGCTCGCTGCGTGCAATGCTCGGGGAAAGG
TGAAATTGACTGTCCTGTATGCAGTGGAAGTGGATTCTTAACGCTAACCC
TTATGGATACCGTTAGTTCGTCACAATGTCGTATGTGCCTGGGGCGCAAG
ATTATTCCGTGTCCTACTTGTAGGCAGATTGTTTTCAAGTCTGTCTTGTG
GTGGGATCAGATTCCTTCTGCTGAGGAAGACCCGGAAGAGAAGTGGAGAG
ATGGTCCAGATGGTCCTAAGTTTGGATGGGGTGGAAATCCTGCGGGTTCA
TAA
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Coding sequence (CDS) from alignment at tig00000941_pilon:131991..132593-

>Ggra4612.t1 ID=Ggra4612.t1|Name=Ggra4612.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=603bp|location=Sequence derived from alignment at tig00000941_pilon:131991..132593- (Gracilaria gracilis GNS1m male)
ATGCAACAATATCAAACCGTAACTCACCAGAATGCTCCTATAACCACTTT
TTTGCCACTGTGTCCACCGTGCCCGTGCTCCGCGCTCTCATCGCCATCGC
TCCGAGGCTTATGTTCATTTCGACGGTTGAAGAGTCCTTGTGCGCGGCAT
ACGGTTCCGAGGAGGAAGAGGGTTCGTATTTCGGCTGAGCAGGCTCAAAC
TCCTGACACTCCAAGCGACGAAGGGAAAGCGGGGAGTCCCCCAGAACCCA
AGCCGGTTAAGGAAGAAGATGAAGAGGACTTTCACATCCCTTTGCCAAAT
GCGTTCGAAGTAAATGGGGATGCTCGCTGCGTGCAATGCTCGGGGAAAGG
TGAAATTGACTGTCCTGTATGCAGTGGAAGTGGATTCTTAACGCTAACCC
TTATGGATACCGTTAGTTCGTCACAATGTCGTATGTGCCTGGGGCGCAAG
ATTATTCCGTGTCCTACTTGTAGGCAGATTGTTTTCAAGTCTGTCTTGTG
GTGGGATCAGATTCCTTCTGCTGAGGAAGACCCGGAAGAGAAGTGGAGAG
ATGGTCCAGATGGTCCTAAGTTTGGATGGGGTGGAAATCCTGCGGGTTCA
TAA
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