Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10966.t1.start1 | Ggra10966.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000938_pilon 118291..118293 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10966.t1.stop1 | Ggra10966.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000938_pilon 119896..119898 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10966.t1 ID=Ggra10966.t1|Name=Ggra10966.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=536bp
MGDDFTAQLLKGFERRADAAKKQVEQRARRAAEHRQRLKKEQEQAEKERL
GAEVDQMMARANQRVSAKRKKRKKRPLAAKTAASASSSAAAKPPAKPRTP
VPRHKVNEMRTNYRAPPKRAAPGKVPKLGPNMEFVVRREKKKKQIRVPHT
YDYSDMFGDDYWRGIDIDGAKKISKETAEATKEAQEIIAEREAQREKNKR
DREENIREVRELERKGLWDEKTQNKRRLEQSEKAWVAVDTPVPIFRQKNS
AVSRAAQSSSSASRLPTKSFGRPGSSSSALPTKKESAAQIQERARLFKER
LMGLTSSNTKKSSTPKTPKGKSSSGSDSDANRRPSLNSKKRTPLKRRILD
SEDSESEDDRRGKKRRRRASEDSDSDRAYRSAKRMRRTRVYSDESDSDHG
RKSGSSKRKRRARDDSDDSDYEDRRRSWKKGRRARDDSDDSEDDRRRSRR
SRKSSGSGKKPRSGRQGYISDEWSNSDGVEDSDEEDLFDISALDREEARS
ERLAKLEDKRELAKLRQDRKDKARRRQEFEERHGG* back to topspliced messenger RNA >Ggra10966.t1 ID=Ggra10966.t1|Name=Ggra10966.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1608bp|location=Sequence derived from alignment at tig00000938_pilon:118291..119898+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGGCGACGACTTCACCGCGCAGCTGCTCAAGGGCTTTGAGCGCCGCGC
CGACGCCGCGAAGAAGCAGGTGGAGCAGCGCGCACGCCGCGCCGCCGAGC
ACCGCCAACGCCTGAAGAAAGAGCAAGAACAGGCAGAGAAGGAACGTCTG
GGCGCCGAAGTCGACCAAATGATGGCGCGTGCCAACCAAAGAGTGTCCGC
CAAACGGAAGAAGCGTAAGAAGAGGCCTCTGGCTGCCAAAACCGCCGCTT
CGGCCTCTTCGTCTGCCGCCGCCAAGCCACCTGCCAAGCCGAGAACGCCG
GTTCCGAGGCACAAAGTCAATGAGATGCGCACCAACTACCGCGCTCCGCC
GAAGCGCGCTGCCCCTGGCAAGGTGCCCAAGCTGGGACCCAACATGGAAT
TCGTTGTTCGCCGCGAGAAAAAGAAGAAGCAGATTCGCGTGCCGCACACG
TACGACTATTCCGACATGTTTGGCGACGATTATTGGCGCGGCATTGACAT
AGACGGCGCGAAAAAGATATCCAAGGAAACCGCCGAAGCCACCAAGGAGG
CGCAGGAAATCATTGCTGAGCGCGAAGCCCAGCGAGAGAAGAATAAGCGC
GATCGAGAGGAAAACATCCGCGAGGTTCGTGAACTGGAGAGGAAAGGACT
CTGGGATGAGAAAACCCAGAACAAGAGGCGACTGGAGCAATCAGAGAAGG
CATGGGTAGCTGTTGACACCCCTGTGCCTATCTTCCGCCAGAAGAACTCC
GCCGTATCACGCGCAGCACAGTCCTCGTCTTCTGCCTCCAGGCTACCGAC
AAAGTCCTTCGGTAGGCCTGGTTCTTCTTCTTCTGCACTACCCACGAAAA
AGGAAAGTGCGGCTCAGATTCAAGAGCGCGCTCGTCTTTTCAAGGAACGT
CTCATGGGCCTCACCTCTTCGAACACCAAGAAGTCTTCAACCCCCAAGAC
TCCTAAGGGCAAGAGTAGCTCCGGTTCAGACTCTGATGCGAACCGTAGAC
CTTCGTTGAACAGCAAGAAACGAACTCCGCTAAAGCGCCGTATCTTGGAC
TCTGAAGACTCGGAGAGCGAAGACGATCGTCGTGGCAAAAAAAGGAGGCG
ACGAGCTAGCGAAGACTCGGATTCCGACCGCGCGTATCGAAGCGCGAAGA
GAATGCGCCGAACCCGAGTGTACAGCGACGAATCTGACTCTGATCACGGC
CGAAAATCTGGAAGCTCGAAAAGGAAGCGTCGTGCTCGGGACGATAGCGA
TGACTCGGACTACGAAGACCGACGCCGAAGCTGGAAGAAGGGTCGTCGGG
CTCGTGACGACAGCGACGATTCCGAAGACGATCGTCGACGCAGTCGACGC
AGTCGAAAGTCTTCTGGAAGCGGAAAGAAGCCCCGCTCAGGTCGTCAGGG
CTATATCAGCGATGAGTGGAGCAACTCAGACGGTGTTGAAGACTCTGACG
AGGAAGATCTGTTTGACATTTCCGCACTTGATCGGGAGGAGGCCAGAAGC
GAACGCCTTGCGAAGTTGGAAGACAAGAGAGAACTCGCGAAGCTTCGCCA
AGACAGGAAAGATAAGGCGCGAAGGCGCCAGGAATTTGAAGAACGGCACG
GCGGCTAA back to topprotein sequence of Ggra10966.t1 >Ggra10966.t1 ID=Ggra10966.t1|Name=Ggra10966.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=536bp
MGDDFTAQLLKGFERRADAAKKQVEQRARRAAEHRQRLKKEQEQAEKERL
GAEVDQMMARANQRVSAKRKKRKKRPLAAKTAASASSSAAAKPPAKPRTP
VPRHKVNEMRTNYRAPPKRAAPGKVPKLGPNMEFVVRREKKKKQIRVPHT
YDYSDMFGDDYWRGIDIDGAKKISKETAEATKEAQEIIAEREAQREKNKR
DREENIREVRELERKGLWDEKTQNKRRLEQSEKAWVAVDTPVPIFRQKNS
AVSRAAQSSSSASRLPTKSFGRPGSSSSALPTKKESAAQIQERARLFKER
LMGLTSSNTKKSSTPKTPKGKSSSGSDSDANRRPSLNSKKRTPLKRRILD
SEDSESEDDRRGKKRRRRASEDSDSDRAYRSAKRMRRTRVYSDESDSDHG
RKSGSSKRKRRARDDSDDSDYEDRRRSWKKGRRARDDSDDSEDDRRRSRR
SRKSSGSGKKPRSGRQGYISDEWSNSDGVEDSDEEDLFDISALDREEARS
ERLAKLEDKRELAKLRQDRKDKARRRQEFEERHGG* back to topmRNA from alignment at tig00000938_pilon:118291..119898+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10966.t1 ID=Ggra10966.t1|Name=Ggra10966.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1608bp|location=Sequence derived from alignment at tig00000938_pilon:118291..119898+ (Gracilaria gracilis GNS1m male)
ATGGGCGACGACTTCACCGCGCAGCTGCTCAAGGGCTTTGAGCGCCGCGC
CGACGCCGCGAAGAAGCAGGTGGAGCAGCGCGCACGCCGCGCCGCCGAGC
ACCGCCAACGCCTGAAGAAAGAGCAAGAACAGGCAGAGAAGGAACGTCTG
GGCGCCGAAGTCGACCAAATGATGGCGCGTGCCAACCAAAGAGTGTCCGC
CAAACGGAAGAAGCGTAAGAAGAGGCCTCTGGCTGCCAAAACCGCCGCTT
CGGCCTCTTCGTCTGCCGCCGCCAAGCCACCTGCCAAGCCGAGAACGCCG
GTTCCGAGGCACAAAGTCAATGAGATGCGCACCAACTACCGCGCTCCGCC
GAAGCGCGCTGCCCCTGGCAAGGTGCCCAAGCTGGGACCCAACATGGAAT
TCGTTGTTCGCCGCGAGAAAAAGAAGAAGCAGATTCGCGTGCCGCACACG
TACGACTATTCCGACATGTTTGGCGACGATTATTGGCGCGGCATTGACAT
AGACGGCGCGAAAAAGATATCCAAGGAAACCGCCGAAGCCACCAAGGAGG
CGCAGGAAATCATTGCTGAGCGCGAAGCCCAGCGAGAGAAGAATAAGCGC
GATCGAGAGGAAAACATCCGCGAGGTTCGTGAACTGGAGAGGAAAGGACT
CTGGGATGAGAAAACCCAGAACAAGAGGCGACTGGAGCAATCAGAGAAGG
CATGGGTAGCTGTTGACACCCCTGTGCCTATCTTCCGCCAGAAGAACTCC
GCCGTATCACGCGCAGCACAGTCCTCGTCTTCTGCCTCCAGGCTACCGAC
AAAGTCCTTCGGTAGGCCTGGTTCTTCTTCTTCTGCACTACCCACGAAAA
AGGAAAGTGCGGCTCAGATTCAAGAGCGCGCTCGTCTTTTCAAGGAACGT
CTCATGGGCCTCACCTCTTCGAACACCAAGAAGTCTTCAACCCCCAAGAC
TCCTAAGGGCAAGAGTAGCTCCGGTTCAGACTCTGATGCGAACCGTAGAC
CTTCGTTGAACAGCAAGAAACGAACTCCGCTAAAGCGCCGTATCTTGGAC
TCTGAAGACTCGGAGAGCGAAGACGATCGTCGTGGCAAAAAAAGGAGGCG
ACGAGCTAGCGAAGACTCGGATTCCGACCGCGCGTATCGAAGCGCGAAGA
GAATGCGCCGAACCCGAGTGTACAGCGACGAATCTGACTCTGATCACGGC
CGAAAATCTGGAAGCTCGAAAAGGAAGCGTCGTGCTCGGGACGATAGCGA
TGACTCGGACTACGAAGACCGACGCCGAAGCTGGAAGAAGGGTCGTCGGG
CTCGTGACGACAGCGACGATTCCGAAGACGATCGTCGACGCAGTCGACGC
AGTCGAAAGTCTTCTGGAAGCGGAAAGAAGCCCCGCTCAGGTCGTCAGGG
CTATATCAGCGATGAGTGGAGCAACTCAGACGGTGTTGAAGACTCTGACG
AGGAAGATCTGTTTGACATTTCCGCACTTGATCGGGAGGAGGCCAGAAGC
GAACGCCTTGCGAAGTTGGAAGACAAGAGAGAACTCGCGAAGCTTCGCCA
AGACAGGAAAGATAAGGCGCGAAGGCGCCAGGAATTTGAAGAACGGCACG
GCGGCTAA back to topCoding sequence (CDS) from alignment at tig00000938_pilon:118291..119898+ >Ggra10966.t1 ID=Ggra10966.t1|Name=Ggra10966.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1608bp|location=Sequence derived from alignment at tig00000938_pilon:118291..119898+ (Gracilaria gracilis GNS1m male)
ATGGGCGACGACTTCACCGCGCAGCTGCTCAAGGGCTTTGAGCGCCGCGC
CGACGCCGCGAAGAAGCAGGTGGAGCAGCGCGCACGCCGCGCCGCCGAGC
ACCGCCAACGCCTGAAGAAAGAGCAAGAACAGGCAGAGAAGGAACGTCTG
GGCGCCGAAGTCGACCAAATGATGGCGCGTGCCAACCAAAGAGTGTCCGC
CAAACGGAAGAAGCGTAAGAAGAGGCCTCTGGCTGCCAAAACCGCCGCTT
CGGCCTCTTCGTCTGCCGCCGCCAAGCCACCTGCCAAGCCGAGAACGCCG
GTTCCGAGGCACAAAGTCAATGAGATGCGCACCAACTACCGCGCTCCGCC
GAAGCGCGCTGCCCCTGGCAAGGTGCCCAAGCTGGGACCCAACATGGAAT
TCGTTGTTCGCCGCGAGAAAAAGAAGAAGCAGATTCGCGTGCCGCACACG
TACGACTATTCCGACATGTTTGGCGACGATTATTGGCGCGGCATTGACAT
AGACGGCGCGAAAAAGATATCCAAGGAAACCGCCGAAGCCACCAAGGAGG
CGCAGGAAATCATTGCTGAGCGCGAAGCCCAGCGAGAGAAGAATAAGCGC
GATCGAGAGGAAAACATCCGCGAGGTTCGTGAACTGGAGAGGAAAGGACT
CTGGGATGAGAAAACCCAGAACAAGAGGCGACTGGAGCAATCAGAGAAGG
CATGGGTAGCTGTTGACACCCCTGTGCCTATCTTCCGCCAGAAGAACTCC
GCCGTATCACGCGCAGCACAGTCCTCGTCTTCTGCCTCCAGGCTACCGAC
AAAGTCCTTCGGTAGGCCTGGTTCTTCTTCTTCTGCACTACCCACGAAAA
AGGAAAGTGCGGCTCAGATTCAAGAGCGCGCTCGTCTTTTCAAGGAACGT
CTCATGGGCCTCACCTCTTCGAACACCAAGAAGTCTTCAACCCCCAAGAC
TCCTAAGGGCAAGAGTAGCTCCGGTTCAGACTCTGATGCGAACCGTAGAC
CTTCGTTGAACAGCAAGAAACGAACTCCGCTAAAGCGCCGTATCTTGGAC
TCTGAAGACTCGGAGAGCGAAGACGATCGTCGTGGCAAAAAAAGGAGGCG
ACGAGCTAGCGAAGACTCGGATTCCGACCGCGCGTATCGAAGCGCGAAGA
GAATGCGCCGAACCCGAGTGTACAGCGACGAATCTGACTCTGATCACGGC
CGAAAATCTGGAAGCTCGAAAAGGAAGCGTCGTGCTCGGGACGATAGCGA
TGACTCGGACTACGAAGACCGACGCCGAAGCTGGAAGAAGGGTCGTCGGG
CTCGTGACGACAGCGACGATTCCGAAGACGATCGTCGACGCAGTCGACGC
AGTCGAAAGTCTTCTGGAAGCGGAAAGAAGCCCCGCTCAGGTCGTCAGGG
CTATATCAGCGATGAGTGGAGCAACTCAGACGGTGTTGAAGACTCTGACG
AGGAAGATCTGTTTGACATTTCCGCACTTGATCGGGAGGAGGCCAGAAGC
GAACGCCTTGCGAAGTTGGAAGACAAGAGAGAACTCGCGAAGCTTCGCCA
AGACAGGAAAGATAAGGCGCGAAGGCGCCAGGAATTTGAAGAACGGCACG
GCGGCTAA back to top
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