Ggra5804.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra5804.t1
Unique Name	Ggra5804.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	317

Homology

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BLAST of Ggra5804.t1 vs. uniprot
Match: A0A2V3IZG2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZG2_9FLOR)

HSP 1 Score: 437 bits (1125), Expect = 4.480e-152
Identity = 207/315 (65.71%), Postives = 250/315 (79.37%), Query Frame = 0

Query:    1 MPASEAPPAHEEAVPPNVAHAYPPQENPAPKLLFLALLTGSILALAVHRLDHTVKTSIVNKVASFAGVSEGTPGVPSVAVCYSGHLGTFPHVFHQNLDVIRSVDKNADIFFYVDPKDDYHHEHSGEHYVEEHDLGVLQPMFNAMKAKVIHTFSADAIKTPETSQCYMREGTDKSHYSQHFLQFYAAHECYKMIKAEEQASGQKYEWILRLQPNMRIHVSLPSPDKQPRVHMSGTAIALVPRAMADDYFSVVQAFEPDGCGPLDQLGGGPCENYSYEHGTPECLLIKWLSMADIIPSNGVFVKRKIMYPTSPENPD 315
            MPAS+   A  E+ PPNVA AYPP+ NPA +LL L +L G+I+AL VHR D   KT+++NK+ +    S       ++AVCYSGHLGTFPHVFHQNLD IRS DKNA IFF+VDPKDDYHHE SG  YVEEHD+G++QPMF+AMKAKV+ TFS +AI  P+ SQCYMRE ++ +HYS++++QFYAA+ECYKMI+ EEQASG++Y+WILRLQPNM+I +     D +PRVHMSG AIAL+PR MADD+FSVVQAFEP  C PLDQLGG PCE YSYEH TPECL IKWLSM  IIPSNG +V RKI+YPT P+ P+
Sbjct:    1 MPASDDQSARGESEPPNVALAYPPRSNPAARLLPLVMLFGAIVALIVHRSDLLTKTAVINKLNNITSTSNAAASPATLAVCYSGHLGTFPHVFHQNLDAIRSFDKNAHIFFFVDPKDDYHHERSGHRYVEEHDMGLIQPMFDAMKAKVVRTFSTEAITVPKASQCYMRENSESNHYSKYYMQFYAANECYKMIETEEQASGKQYKWILRLQPNMQIRLKSIPEDAEPRVHMSGNAIALIPRQMADDFFSVVQAFEPGKCKPLDQLGGAPCEKYSYEHWTPECLQIKWLSMTHIIPSNGAYVNRKIIYPTPPDIPN 315

The following BLAST results are available for this feature:

BLAST of Ggra5804.t1 vs. uniprot

BLAST of Ggra5804.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IZG2	4.480e-152	65.71	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 32..50
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..31
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 51..316

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000935_pilon	contig	tig00000935_pilon:348936..349886 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra5804.t1	Ggra5804.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000935_pilon 348936..349886 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra5804.t1 ID=Ggra5804.t1|Name=Ggra5804.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=317bp
MPASEAPPAHEEAVPPNVAHAYPPQENPAPKLLFLALLTGSILALAVHRL
DHTVKTSIVNKVASFAGVSEGTPGVPSVAVCYSGHLGTFPHVFHQNLDVI
RSVDKNADIFFYVDPKDDYHHEHSGEHYVEEHDLGVLQPMFNAMKAKVIH
TFSADAIKTPETSQCYMREGTDKSHYSQHFLQFYAAHECYKMIKAEEQAS
GQKYEWILRLQPNMRIHVSLPSPDKQPRVHMSGTAIALVPRAMADDYFSV
VQAFEPDGCGPLDQLGGGPCENYSYEHGTPECLLIKWLSMADIIPSNGVF
VKRKIMYPTSPENPDL*