Ggra5767.t1 (polypeptide) Gracilaria gracilis GNS1m male
|
Overview
Homology
BLAST of Ggra5767.t1 vs. uniprot
Match: A0A2V3IY80 (Transcription initiation factor TFIID subunit 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY80_9FLOR) HSP 1 Score: 461 bits (1187), Expect = 6.160e-152 Identity = 244/413 (59.08%), Postives = 293/413 (70.94%), Query Frame = 0
Query: 347 PKGNSHKLR---GNGAAKQDKMYLKSPLERAKGDLGPPLRPQFTTVDGSEDLFFVPDKEVTVKSVIETNMPLVPLDVNLSKHWLAVSGKQPSIPQNPTNKCKMGYGEDEDTEPVTKKQKVPTEVKPLVKHELSRELQLYLEQITTAVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFVF------------------------------RLYLQQVLPAVLTCILGKRFSGNPRDNHWALRDYTTTVMKKICDRYGQQYPDIQPRITKTCASALDSTKRALTTHYGAIVGLAALGRRVLERYLLPRLERKTYLATVEKIVKNPNTKPVRREEACRVFGALFWAVSLVREPSNGATKP-SEVDVQLKHFVDYLPSAETIFKAGEVELGNR-FYPHRHGKTETQLTSALLEERK 724
P+GNSHK G A KQ K Y ++ G + + F V+G EDL+FVPDK+ TV S+IETN+PLVPLDV+L++HWL + GKQP+IPQNP + GE D EPV KKQK EVKPLVKHELSRELQLYLEQITTAVQGDDTKHLEQCLYAVA+EKGIAELLPYFTQF++ RLYL QVLPAVLTC+L KRFSGNPR+NHWA+RDY + V+KKIC RYG QYPDIQPRITKTCASALD+ KR +TTHYGAIVGLAALG RV+ER+LLPRLE+K Y+ T+E+++ N TK +R+EEA RVFGAL WAVSL R+ + + S V VQ+ H + YLPSA +F+ G+ LG + +PH G T+ +LTS LL+ K
Sbjct: 131 PRGNSHKATTGSGTPAGKQ-KGYAEA------GRVDGSTQAFFKAVEGIEDLYFVPDKQKTVTSIIETNIPLVPLDVSLTRHWLTIDGKQPTIPQNPKRSRPVSMGESADAEPVAKKQKTACEVKPLVKHELSRELQLYLEQITTAVQGDDTKHLEQCLYAVANEKGIAELLPYFTQFLYKCVTKGGSLALMFSCLRLVNAMLDNDVFDLRLYLHQVLPAVLTCMLAKRFSGNPRENHWAIRDYASKVVKKICQRYGNQYPDIQPRITKTCASALDNPKRPMTTHYGAIVGLAALGHRVVERHLLPRLEKKAYMRTLERLITNHATKSIRKEEASRVFGALVWAVSLARDSQAQSPEDLSNVQVQVNHALSYLPSAVAVFQVGQKVLGEKPLFPHSDGMTDAELTSDLLKASK 536
BLAST of Ggra5767.t1 vs. uniprot
Match: R7QB25 (TAF domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB25_CHOCR) HSP 1 Score: 251 bits (642), Expect = 2.660e-71 Identity = 155/397 (39.04%), Postives = 218/397 (54.91%), Query Frame = 0
Query: 385 QFTTVDGSEDLFFVPDKEVTVKSVIETNMPLVPLDVNLSKHWLAVSGKQPSIPQNP---TNKCKMGYGEDEDTEPVTKKQKVPTEVKPLVKHELSRELQLYLEQITTAVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFV-----------------FRL---------------YLQQVLPAVLTCILGKRFSGNPRDNHWALRDYTTTVMKKICDR-YGQQYPDIQPRITKTCASALDSTKRALTTHYGAIVGLAALGRRVLERYLLPRLERKTYLATVEKIVKNPNTKPVRREEACRVFGALFWAVSL------VREPSNGATKPSEVD--------------VQLKHFVDYLPSAETIFKAGEVELGNRFYPHRHGKTETQLTSALLEERKA 725
QF VDG +LFFV D EV+VKS+++ P +PL+V ++ HWLAV GKQP+I QNP T + ++ G+ E T + EV+ +KH+L+RELQLY + + A+ G+D LE CL +++ + GIA LLPY T+FV RL YL Q+LPAV++C++GKR NPR+NHWALRDYT ++++IC Y + Y +Q RI KT AL KR LTTHYGAIVG+ LG+ +E ++P L K YL + +V++ K VRREE +VFGAL WAVS VR NG + + V + +P AE + + E+ R YP K+E++L +L E++KA
Sbjct: 150 QFGQVDGVPELFFVHDSEVSVKSLLQAPPPELPLEVTVNAHWLAVDGKQPAISQNPMKQTQREELESGKRESDG--TDGEGTQVEVRAPLKHDLTRELQLYFQHVQDAIFGEDVGQLEACLNSISEDAGIAVLLPYLTKFVKDSVQRSIRDLRVLFSVMRLVRAMLENEVFSELERYLHQLLPAVMSCVVGKRLCRNPRENHWALRDYTAGLLREICGTAYAKGYVGVQQRIVKTFVDALKDVKRPLTTHYGAIVGITCLGKHTVEGVVVPLL--KGYLPKIIGLVEDVRQKSVRREEGSKVFGALAWAVSEDGVGNGVRPGQNGEASLNGMSDGMQWKAAGAAGGKVSISRMSSVVPRAEEVHERLWREMDRRLYPFGESKSESELAVSLAEQKKA 542
BLAST of Ggra5767.t1 vs. uniprot
Match: L8GZG8 (TAF6_C domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZG8_ACACA) HSP 1 Score: 217 bits (552), Expect = 2.670e-59 Identity = 126/319 (39.50%), Postives = 179/319 (56.11%), Query Frame = 0
Query: 385 QFTTVDGSEDLFFVPDKEVTVKSVIETNMPLVPLDVNLSKHWLAVSGKQPSIPQNPTNKCKMGYGEDEDTEPVTKKQKVPTE----VKPLVKHELSRELQLYLEQITTAVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFV-------------------------------FRLYLQQVLPAVLTCILGKRFSGNPRDNHWALRDYTTTVMKKICDRYGQQYPDIQPRITKTCASALDSTKRALTTHYGAIVGLAALGRRVLERYLLPRLERKTYLATVEKIVKNPNTKPVRREEACRVFGALFWAVSLVREPSNGA 668
+F G++DLFF+ D+E+ +I + +P VP + +LS HWLAV G QP+IPQNPT + + G + +K+ E V+P+VKH LS+ELQLY E+IT AV+G K L ++A + GI +LLPYFTQF+ YL Q++P +LTC++G+R NP ++HW LRDY +++ IC R+G+ Y ++QPRITKT +A R LTTHYGAIVGL++LG V + +LP L K+YL +E + N +RR EA + +GAL A E S A
Sbjct: 36 KFVKAVGTKDLFFIDDREIDFTEIIASPLPEVPRESSLSAHWLAVEGVQPAIPQNPTLQIETGDAA------LKRKRAAAAESDLQVRPIVKHTLSKELQLYYEKITKAVKGTSEKVATAALNSLATDPGIQQLLPYFTQFISDEVTHNLHNLAYLKNLMRMVRALLQSNNLHIEPYLHQLMPPILTCLVGRRLCENPNEDHWELRDYAASLVALICLRFGKAYTNLQPRITKTLINAFLDLSRPLTTHYGAIVGLSSLGHYVTQLLILPNL--KSYLTLLEPELNGTNA--IRRLEAKKCYGALLKAAGRYLEQSTSA 344
BLAST of Ggra5767.t1 vs. uniprot
Match: A0A103XM02 (Armadillo-type fold n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103XM02_CYNCS) HSP 1 Score: 206 bits (524), Expect = 3.890e-56 Identity = 118/280 (42.14%), Postives = 165/280 (58.93%), Query Frame = 0
Query: 379 GPPLRPQFTTVDGSEDLFFVPDKEVTVKSVIETNMPLVPLDVNLSKHWLAVSGKQPSIPQNPTNKCKMGYGEDEDTEPVTKKQKVPTEVKPLVKHELSRELQLYLEQITT-AVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFVFRLYLQQVLPAVLTCILGKRFSGNPRDNHWALRDYTTTVMKKICDRYGQQYPDIQPRITKTCASALDSTKRALTTHYGAIVGLAALGRRVLERYLLPRLERKTYLATVEKIVKNPNTKPVRREEACRVFGALFWA 657
G PLR F G +DLF++ DK+V K VIE +P PLD ++ HWLA+ G QP+IP+N + +T+ +K +P +++ VKH LSRELQLY +IT AV DT ++ L ++A + G+ L+PYFT F+ L Q++P V+TC++ KR DNHW LRD+T ++ IC R+G Y +Q R+TKT + KR LT HYGAI GL+ALG V+ LLP LE YL +E+++ K + R EA RV+GAL A
Sbjct: 79 GDPLR--FKRALGHKDLFYIDDKDVDFKDVIEAPLPKAPLDTSVFCHWLAIEGVQPAIPENAPVEV---IAAPPETKKAEQKNDLPIDIRLPVKHVLSRELQLYFNKITELAVSMPDTVLFKEALMSLATDSGLHPLVPYFTCFI-EDELHQLMPPVVTCVVAKRLGNRIADNHWELRDFTANLVATICKRFGHNYSSLQKRLTKTLLKSFLDQKRTLTQHYGAIQGLSALGPDVVRSLLLPNLE--IYLGFLEEMLLENQKKEMTRHEAWRVYGALLRA 350
BLAST of Ggra5767.t1 vs. uniprot
Match: transcription initiation factor TFIID subunit 6 isoform X2 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD92D9C (transcription initiation factor TFIID subunit 6 isoform X2 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD92D9C) HSP 1 Score: 203 bits (516), Expect = 4.010e-54 Identity = 120/311 (38.59%), Postives = 172/311 (55.31%), Query Frame = 0
Query: 379 GPPLRPQFTTVDGSEDLFFVPDKEVTVKSVIETNMPLVPLDVNLSKHWLAVSGKQPSIPQNPTNKCKMGYGEDEDTEPVTKKQKVPTEVKPLVKHELSRELQLYLEQITT-AVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFV----------FRL---------------------YLQQVLPAVLTCILGKRFSGNPRDNHWALRDYTTTVMKKICDRYGQQYPDIQPRITKTCASALDSTKRALTTHYGAIVGLAALGRRVLERYLLPRLERKTYLATVEKIVKNPNTKPVRREEACRVFGALFWA 657
G PLR F G +DLF++ DK+V K VIE +P PLD ++ HWLA+ G QP+IP+N + + + +P K ++P +++ VKH LSRELQLY +IT AV DT ++ L ++A + G+ L+PYFT F+ F L YL Q++P V+TCI+ +R DNHW LRD++ ++ IC R+G Y D+Q R+T+T + K+ LT HYGAI GL ALG V+ RY+LP LE +YL +E+++ K + R EA RV+GAL A
Sbjct: 79 GDPLR--FKRALGHKDLFYIDDKDVDFKDVIEAPLPKAPLDTSIFCHWLAIEGVQPAIPENAPVEVITTLPDTK--KPEQKIDELPVDIRLPVKHVLSRELQLYFNKITELAVNTPDTDLFKEALMSLATDSGLHPLVPYFTCFIEDEVSRGLNNFHLLFALMRLVWSLLQNPHIHIEPYLHQLMPPVVTCIVARRLGNRIADNHWELRDFSANLVATICKRFGHSYGDLQTRLTRTLHKSFSDRKQTLTQHYGAIQGLTALGPHVVRRYILPDLE--SYLGFLEEMILENKQKEITRHEAWRVYGALLRA 383
BLAST of Ggra5767.t1 vs. uniprot
Match: A0A8H7PFS0 (TAF domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PFS0_MORIS) HSP 1 Score: 201 bits (512), Expect = 9.430e-54 Identity = 122/326 (37.42%), Postives = 181/326 (55.52%), Query Frame = 0
Query: 379 GPPLRPQFTTVDGSEDLFFVPDKEVTVKSVIETNMPLVPLDVNLSKHWLAVSGKQPSIPQNPTNKCKMGYGEDEDTEPVTKKQKVPT--------EVKPLVKHELSRELQLYLEQITTAVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFVFRL-------------------------------YLQQVLPAVLTCILGKRFSGNPRDNHWALRDYTTTVMKKICDRYGQQYPDIQPRITKTCASALDSTKRALTTHYGAIVGLAALGRRVLERYLLPRLERKTYLATV-EKIVKNPNTKPVRREEACRVFGALFWAV-SLVRE 663
G PLR + TT + S D+++V D EV +++ +P VPLDV + HWLA+ G QP+IPQNPT D +E ++K+ K +VKPLVKH LS+ELQLY E+IT AV ++ + Q ++ + G+ +LLPYF QF+ YL Q++PA+++C++GKR NP+D+HW++RD+ +M +C RYG+ Y +QPRITKT A K+ +TTHYGAIVG+ LGR V+ +LP KTY + + ++ PNT ++ EA + AL A+ L++E
Sbjct: 82 GDPLRFKKTTANMS-DIYYVGDDEVDFDTILNKPLPKVPLDVTFTAHWLAIEGVQPAIPQNPTPA-------DAKSELLSKRLKATANATGNDQVDVKPLVKHVLSKELQLYYERITEAVVSEEERLRYQAYESLRSDPGLHQLLPYFVQFIVEKVKQNMRNLVVCESMLCMIQALLSSPHLFVDPYLNQLMPAIISCMVGKRICENPKDDHWSIRDFAARLMALVCQRYGKTYHTMQPRITKTLLHAFLDVKKPMTTHYGAIVGMTQLGREVIRTVILPNT--KTYADNILREPLETPNT--IKHLEASKCRDALADALLKLIKE 395
BLAST of Ggra5767.t1 vs. uniprot
Match: A0A2J6KLJ6 (TAF domain-containing protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6KLJ6_LACSA) HSP 1 Score: 203 bits (516), Expect = 1.120e-53 Identity = 120/311 (38.59%), Postives = 172/311 (55.31%), Query Frame = 0
Query: 379 GPPLRPQFTTVDGSEDLFFVPDKEVTVKSVIETNMPLVPLDVNLSKHWLAVSGKQPSIPQNPTNKCKMGYGEDEDTEPVTKKQKVPTEVKPLVKHELSRELQLYLEQITT-AVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFV----------FRL---------------------YLQQVLPAVLTCILGKRFSGNPRDNHWALRDYTTTVMKKICDRYGQQYPDIQPRITKTCASALDSTKRALTTHYGAIVGLAALGRRVLERYLLPRLERKTYLATVEKIVKNPNTKPVRREEACRVFGALFWA 657
G PLR F G +DLF++ DK+V K VIE +P PLD ++ HWLA+ G QP+IP+N + + + +P K ++P +++ VKH LSRELQLY +IT AV DT ++ L ++A + G+ L+PYFT F+ F L YL Q++P V+TCI+ +R DNHW LRD++ ++ IC R+G Y D+Q R+T+T + K+ LT HYGAI GL ALG V+ RY+LP LE +YL +E+++ K + R EA RV+GAL A
Sbjct: 79 GDPLR--FKRALGHKDLFYIDDKDVDFKDVIEAPLPKAPLDTSIFCHWLAIEGVQPAIPENAPVEVITTLPDTK--KPEQKIDELPVDIRLPVKHVLSRELQLYFNKITELAVNTPDTDLFKEALMSLATDSGLHPLVPYFTCFIEDEVSRGLNNFHLLFALMRLVWSLLQNPHIHIEPYLHQLMPPVVTCIVARRLGNRIADNHWELRDFSANLVATICKRFGHSYGDLQTRLTRTLHKSFSDRKQTLTQHYGAIQGLTALGPHVVRRYILPDLE--SYLGFLEEMILENKQKEITRHEAWRVYGALLRA 383
BLAST of Ggra5767.t1 vs. uniprot
Match: A0A6A6KTL6 (TAF domain-containing protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6KTL6_HEVBR) HSP 1 Score: 200 bits (509), Expect = 1.190e-53 Identity = 121/311 (38.91%), Postives = 174/311 (55.95%), Query Frame = 0
Query: 379 GPPLRPQFTTVDGSEDLFFVPDKEVTVKSVIETNMPLVPLDVNLSKHWLAVSGKQPSIPQNPTNKCKMGYGEDEDTEPVTKKQKVPTEVKPLVKHELSRELQLYLEQITT-AVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFV--------------FRL-----------------YLQQVLPAVLTCILGKRFSGNPRDNHWALRDYTTTVMKKICDRYGQQYPDIQPRITKTCASALDSTKRALTTHYGAIVGLAALGRRVLERYLLPRLERKTYLATVEKIVKNPNTKPVRREEACRVFGALFWA 657
G PL QF G DLF++ DK+V K VIE +P PLD ++ HWLA+ G QP+IP+N + + +++E +K K+P ++K VKH LSRELQLY ++IT ++ D+ ++ L ++A + G+ L+PYFT F+ F L YL Q++P+V+TC++ KR DNHW LRD+T +++ IC R+G Y +Q R+TKT +AL KR+LT HYGAI GLAALG V+ +LP LE YL +E + ++R EA RV+GAL A
Sbjct: 79 GGPL--QFKRAIGHRDLFYIDDKDVDFKDVIEAPLPKAPLDTSVVCHWLAIEGVQPAIPENAPLEVIAPPSDGKNSE---QKDKLPVDIKLPVKHVLSRELQLYFDKITELTLRRSDSALFKEALVSLATDSGLHPLVPYFTCFIADEVACGLNDYKLLFALMRVVWSLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGNRFADNHWELRDFTASLVASICKRFGHIYGSLQTRLTKTLLNALLDPKRSLTQHYGAIQGLAALGPNVVRLLVLPNLE--PYLRVLEPEILEKQRNEMKRYEAWRVYGALLRA 382
BLAST of Ggra5767.t1 vs. uniprot
Match: A0A7S2ZD09 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZD09_9RHOD) HSP 1 Score: 200 bits (509), Expect = 4.500e-53 Identity = 132/379 (34.83%), Postives = 193/379 (50.92%), Query Frame = 0
Query: 385 QFTTVDGSEDLFFVPDKEVTVKSVIETNMPLVPLDVNLSKHWLAVSGKQPSIPQNP---TNKCKMGYGEDEDTEPVTKKQKVPTEVKPLVKHELSRELQLYLEQITTAVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFV-----------------FRL--------------YLQQVLPAVLTCILGKRFSGNP-RDNHWALRDYTTTVMKKICDRYGQQYPDIQPRITKTCASALDSTKRALTTHYGAIVGLAALGRRVLERYLLPRLERKTYLATVEKIVKNPNTKPVRREEACRVFGALFWA------------------VSLVREPSNGATKPSEVDVQLKHFVDYLPSAETIFKAGEVELGNRFYPHRHGK 710
+F V G+ +LF+V DKEV + I+ ++P VP +L HWL+V G QP+I QNP TN+ + G D V+ +Q E KPLVKH LSRELQLY E +T + G+D ++ CL +VA G+ +LLPYF FV RL Y Q+LP VLTC++ K+ N ++HW+LRD++ ++ I R+ YP +QPRITKT AL ++ LTTHYGAIVGL ALG V+ L+P + K Y + +E+ ++ P+R+ E + + A+ A V L +P +G K + +L + +P ET + + E G+ P R+ K
Sbjct: 96 KFVKVSGNTNLFYVADKEVDLSEFIQKDLPPVPNLPSLMAHWLSVEGVQPAISQNPPPETNEMESGGKRKRD---VSSQQ---PEFKPLVKHVLSRELQLYYEHVTKHIVGNDNAQVDLCLKSVAEAPGLQQLLPYFVHFVVTKGNANLKNLKVLKALMRLVHALLANPYFGIEHYCHQLLPVVLTCVVRKKLGKNQSEEDHWSLRDFSAKIVADISSRFSDTYPTLQPRITKTYLGALLDVQKPLTTHYGAIVGLTALGPNVVNFLLVPHI--KAYTSQLEEELQQEPLTPIRKYELAKTYSAIMLAAGTHMNAGDAKKDGDSDEVMLSSKPDHGFLKALPTE-RLAAMKELMPFFETRYDSMTEEFGDSLEPFRNLK 465
BLAST of Ggra5767.t1 vs. uniprot
Match: A0A061DKS3 (Tata box associated factor ii 59 n=6 Tax=Malvaceae TaxID=3629 RepID=A0A061DKS3_THECC) HSP 1 Score: 201 bits (512), Expect = 6.310e-53 Identity = 120/311 (38.59%), Postives = 170/311 (54.66%), Query Frame = 0
Query: 379 GPPLRPQFTTVDGSEDLFFVPDKEVTVKSVIETNMPLVPLDVNLSKHWLAVSGKQPSIPQNPTNKCKMGYGEDEDTEPVTKKQKVPTEVKPLVKHELSRELQLYLEQITT-AVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFV-------------------------------FRLYLQQVLPAVLTCILGKRFSGNPRDNHWALRDYTTTVMKKICDRYGQQYPDIQPRITKTCASALDSTKRALTTHYGAIVGLAALGRRVLERYLLPRLERKTYLATVEKIVKNPNTKPVRREEACRVFGALFWA 657
G PL QF G DLF++ DK+V +K VIE +P PLD + HWLA+ G QP+IP+N + + + E +K ++P ++K VKH LSRELQLY ++IT V+ D+ ++ L ++A + G+ L+PYFT F+ YL Q++P+V+TC++ K+ DNHW LRD+T ++ IC R+G Y +Q R+TKT SAL KRALT HYGAI GLAALG V+ +LP LE L E +++ + V+R EA RV+GAL A
Sbjct: 79 GGPL--QFKRAVGHRDLFYIDDKDVDLKDVIEAPLPKAPLDTAVVCHWLAIEGVQPAIPENASVGVIAASSDGKTNE---QKDELPVDIKLPVKHVLSRELQLYFDKITELTVRKSDSALFKEALVSLATDSGLHPLVPYFTYFIADEVSRGLNDYSLLFALMRVVWSLLQNPHIHIETYLHQLMPSVVTCLVSKKLGNRIADNHWELRDFTANLVASICKRFGHVYNTLQTRLTKTLLSALLDPKRALTQHYGAIQGLAALGPNVVRLLILPNLEPYLQLLEPELLLEKQKNE-VKRHEAWRVYGALLLA 383 The following BLAST results are available for this feature:
BLAST of Ggra5767.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra5767.t1 ID=Ggra5767.t1|Name=Ggra5767.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=728bpback to top |